RNA–Protein interactions for RNA: ENST00000434703.5

SOX9-AS1-204, SOX9 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene SOX9-AS1, Length 3,032 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-204ENST00000434703 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.49
SOX9-AS1-204ENST00000434703 LAMB2P55268 1798 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 GOLIM4O00461 696 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RGL2O15211 777 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PTH1RQ03431 593 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SCARF1Q14162 830 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RABEP1Q15276 862 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 GORABQ5T7V8 394 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NBPF5PQ86XG9 351 aaPredicted RBP11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SNRKQ9NRH2 765 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 LRP5O75197 1615 aa11.96□□□□□ -0.5
SOX9-AS1-204ENST00000434703 TAF1P21675 1872 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PDE8BO95263 885 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 IFIT1P09914 478 aaKnown RBP11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 TXNRD1Q16881 649 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SLFNL1Q499Z3 407 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SLC27A3Q5K4L6 730 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RUFY2Q8WXA3 655 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RAD50Q92878 1312 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 TAF5LO75529 589 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 MPHOSPH8Q99549 860 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ANTXR1Q9H6X2 564 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SPEF2Q9C093 1822 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 HSP90B1P14625 803 aaKnown RBP11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PI16Q6UXB8 463 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 KIAA1211Q6ZU35 1233 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PAG1Q9NWQ8 432 aa11.95□□□□□ -0.5
SOX9-AS1-204ENST00000434703 UBR3Q6ZT12 1888 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NFIXQ14938 502 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CCDC158Q5M9N0 1113 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 TTC39AQ5SRH9 613 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 POTEAQ6S8J7 498 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RTL9Q8NET4 1388 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 HIP1O00291 1037 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 MCCP23508 829 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 HSPA4P34932 840 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 FKBP4Q02790 459 aaKnown RBP eCLIP11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SF3B3Q15393 1217 aaKnown RBP11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SLC10A5Q5PT55 438 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ZNF589Q86UQ0 364 aaPredicted RBP11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 KBTBD3Q8NAB2 608 aa11.94□□□□□ -0.5
SOX9-AS1-204ENST00000434703 APBA3O96018 575 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 IGHMBP2P38935 993 aaKnown RBP11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SEC62Q99442 399 aaKnown RBP11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ANP32EQ9BTT0 268 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NYXQ9GZU5 481 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 MROH5Q6ZUA9 1318 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 COL24A1Q17RW2 1714 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CASZ1Q86V15 1759 aa11.93□□□□□ -0.5
SOX9-AS1-204ENST00000434703 FGFR2P21802 821 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PUM3Q15397 648 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CCDC129Q6ZRS4 1044 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RASEFQ8IZ41 740 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 MED23Q9ULK4 1368 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CCDC171Q6TFL3 1326 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 GYS1P13807 737 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ADRA2BP18089 450 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ZAP70P43403 619 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PHKA1P46020 1223 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NBR1Q14596 966 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CELF1Q92879 486 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 WTIPA6NIX2 430 aaPredicted RBP11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 K7ELQ4 463 aaPredicted RBP11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CDC5LQ99459 802 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 FOXD4L1Q9NU39 408 aa11.92□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NPHP1O15259 732 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 EPB41L2O43491 1005 aaKnown RBP11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 MCAMP43121 646 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NEK4P51957 841 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CHRNDQ07001 517 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ANKRD18AQ8IVF6 992 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 NLRP3Q96P20 1036 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SNX14Q9Y5W7 946 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ANAPC15P60006 121 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 ZNF827Q17R98 1081 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PRPF40BQ6NWY9 871 aaKnown RBP11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 LPIN2Q92539 896 aa11.91□□□□□ -0.5
SOX9-AS1-204ENST00000434703 SSFA2P28290 1259 aa11.9□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RBM8AQ9Y5S9 174 aaKnown RBP11.9□□□□□ -0.5
SOX9-AS1-204ENST00000434703 CARMIL3Q8ND23 1372 aa11.9□□□□□ -0.5
SOX9-AS1-204ENST00000434703 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
SOX9-AS1-204ENST00000434703 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
SOX9-AS1-204ENST00000434703 RFX7Q2KHR2 1363 aa11.9□□□□□ -0.5
SOX9-AS1-204ENST00000434703 PLSCR1O15162 318 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 IL17RAQ96F46 866 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 ST18O60284 1047 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 SLC5A1P13866 664 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 SLC51AQ86UW1 340 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 CNBD1Q8NA66 436 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 TNRC6CQ9HCJ0 1690 aaKnown RBP11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 TM4SF1P30408 202 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 KCNJ4P48050 445 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 BSDC1Q9NW68 430 aaPredicted RBP11.89□□□□□ -0.51
SOX9-AS1-204ENST00000434703 TFCP2L1Q9NZI6 479 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms