RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 SPEF2Q9C093 1822 aa28.4■■■□□ 2.14
MBD3-202ENST00000434436 HSP90AB3PQ58FF7 597 aa28.4■■■□□ 2.14
MBD3-202ENST00000434436 U3KPZ7 1027 aaPredicted RBP28.4■■■□□ 2.14
MBD3-202ENST00000434436 SPATA31A1Q5TZJ5 1347 aa28.39■■■□□ 2.13
MBD3-202ENST00000434436 IFIT5Q13325 482 aaKnown RBP28.39■■■□□ 2.13
MBD3-202ENST00000434436 TOB2Q14106 344 aaPredicted RBP28.39■■■□□ 2.13
MBD3-202ENST00000434436 MYH3P11055 1940 aa28.38■■■□□ 2.13
MBD3-202ENST00000434436 ADORA1P30542 326 aa28.38■■■□□ 2.13
MBD3-202ENST00000434436 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.38■■■□□ 2.13
MBD3-202ENST00000434436 PHLPP1O60346 1717 aa28.38■■■□□ 2.13
MBD3-202ENST00000434436 TICAM2Q86XR7 235 aa28.38■■■□□ 2.13
MBD3-202ENST00000434436 HELLSQ9NRZ9 838 aa28.38■■■□□ 2.13
MBD3-202ENST00000434436 TMEM63CQ9P1W3 806 aa28.38■■■□□ 2.13
MBD3-202ENST00000434436 ZMYM1Q5SVZ6 1142 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 TTLL11Q8NHH1 800 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 CYP21A2P08686 494 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 KRT32Q14532 448 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 ANKRD1Q15327 319 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 TAF7LQ5H9L4 462 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 GDPD2Q9HCC8 539 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 AKAP2Q9Y2D5 859 aa28.37■■■□□ 2.13
MBD3-202ENST00000434436 MBD3O95983 291 aa28.36■■■□□ 2.13
MBD3-202ENST00000434436 IL6STP40189 918 aaPredicted RBP28.36■■■□□ 2.13
MBD3-202ENST00000434436 XAGE2Q96GT9 111 aa28.36■■■□□ 2.13
MBD3-202ENST00000434436 CDCA7Q9BWT1 371 aaPredicted RBP28.36■■■□□ 2.13
MBD3-202ENST00000434436 TBC1D2BQ9UPU7 963 aa28.35■■■□□ 2.13
MBD3-202ENST00000434436 F13A1P00488 732 aa28.35■■■□□ 2.13
MBD3-202ENST00000434436 GREM2Q9H772 168 aa28.35■■■□□ 2.13
MBD3-202ENST00000434436 RIC1Q4ADV7 1423 aa28.35■■■□□ 2.13
MBD3-202ENST00000434436 DZIP3Q86Y13 1208 aaKnown RBP28.34■■■□□ 2.13
MBD3-202ENST00000434436 NEK1Q96PY6 1258 aa28.34■■■□□ 2.13
MBD3-202ENST00000434436 ERVV-1B6SEH8 477 aa28.34■■■□□ 2.13
MBD3-202ENST00000434436 DDB1Q16531 1140 aa28.34■■■□□ 2.13
MBD3-202ENST00000434436 USP48Q86UV5 1035 aa28.34■■■□□ 2.13
MBD3-202ENST00000434436 THRAP3Q9Y2W1 955 aaKnown RBP28.34■■■□□ 2.13
MBD3-202ENST00000434436 RIPOR2Q9Y4F9 1068 aa28.34■■■□□ 2.13
MBD3-202ENST00000434436 ITGA6P23229 1130 aa28.33■■■□□ 2.13
MBD3-202ENST00000434436 CTSWP56202 376 aa28.33■■■□□ 2.13
MBD3-202ENST00000434436 MTMR6Q9Y217 621 aa28.33■■■□□ 2.13
MBD3-202ENST00000434436 IRS4O14654 1257 aaPredicted RBP28.33■■■□□ 2.13
MBD3-202ENST00000434436 RNF113AO15541 343 aaKnown RBP28.33■■■□□ 2.13
MBD3-202ENST00000434436 GADD45BO75293 160 aaPredicted RBP28.33■■■□□ 2.13
MBD3-202ENST00000434436 CCDC158Q5M9N0 1113 aa28.33■■■□□ 2.13
MBD3-202ENST00000434436 LAMA4Q16363 1823 aa28.32■■■□□ 2.12
MBD3-202ENST00000434436 TTC39AQ5SRH9 613 aa28.32■■■□□ 2.12
MBD3-202ENST00000434436 TRMT112Q9UI30 125 aaKnown RBP28.32■■■□□ 2.12
MBD3-202ENST00000434436 UBN2Q6ZU65 1347 aa28.32■■■□□ 2.12
MBD3-202ENST00000434436 TMEM87AQ8NBN3 555 aa28.32■■■□□ 2.12
MBD3-202ENST00000434436 DSCC1Q9BVC3 393 aa28.32■■■□□ 2.12
MBD3-202ENST00000434436 GORABQ5T7V8 394 aa28.31■■■□□ 2.12
MBD3-202ENST00000434436 CNPY2Q9Y2B0 182 aa28.31■■■□□ 2.12
MBD3-202ENST00000434436 MAST3O60307 1309 aa28.31■■■□□ 2.12
MBD3-202ENST00000434436 FKBP4Q02790 459 aaKnown RBP eCLIP28.31■■■□□ 2.121e-6■■■□□ 15.1
MBD3-202ENST00000434436 SCARF1Q14162 830 aa28.31■■■□□ 2.12
MBD3-202ENST00000434436 STOX1Q6ZVD7 989 aa28.31■■■□□ 2.12
MBD3-202ENST00000434436 MARCH10Q8NA82 808 aaPredicted RBP28.31■■■□□ 2.12
MBD3-202ENST00000434436 ZNF34Q8IZ26 560 aa28.3■■■□□ 2.12
MBD3-202ENST00000434436 ACSBG1Q96GR2 724 aa28.3■■■□□ 2.12
MBD3-202ENST00000434436 SLIT2O94813 1529 aa28.3■■■□□ 2.12
MBD3-202ENST00000434436 LDHAL6AQ6ZMR3 332 aa28.3■■■□□ 2.12
MBD3-202ENST00000434436 INTS5Q6P9B9 1019 aaKnown RBP28.29■■■□□ 2.12
MBD3-202ENST00000434436 FAM43AQ8N2R8 423 aa28.29■■■□□ 2.12
MBD3-202ENST00000434436 ANKRD18BA2A2Z9 1011 aa28.29■■■□□ 2.12
MBD3-202ENST00000434436 EIF5P55010 431 aaKnown RBP28.29■■■□□ 2.12
MBD3-202ENST00000434436 METTL24Q5JXM2 366 aa28.29■■■□□ 2.12
MBD3-202ENST00000434436 M0R2C6 588 aa28.28■■■□□ 2.12
MBD3-202ENST00000434436 HSPD1P10809 573 aaKnown RBP28.28■■■□□ 2.12
MBD3-202ENST00000434436 PDE8AO60658 829 aa28.28■■■□□ 2.12
MBD3-202ENST00000434436 ATP2B3Q16720 1220 aa28.28■■■□□ 2.12
MBD3-202ENST00000434436 SPATA31A5Q5VU36 1347 aa28.27■■■□□ 2.12
MBD3-202ENST00000434436 SPATA31A7Q8IWB4 1347 aa28.27■■■□□ 2.12
MBD3-202ENST00000434436 A0A0G2JS52 829 aa28.27■■■□□ 2.12
MBD3-202ENST00000434436 NASPP49321 788 aaPredicted RBP28.27■■■□□ 2.12
MBD3-202ENST00000434436 OSBP2Q969R2 916 aa28.27■■■□□ 2.12
MBD3-202ENST00000434436 NUTM2BA6NNL0 878 aaPredicted RBP28.27■■■□□ 2.12
MBD3-202ENST00000434436 NUTM2EB1AL46 878 aaPredicted RBP28.27■■■□□ 2.12
MBD3-202ENST00000434436 Q6ZUG5 572 aa28.27■■■□□ 2.12
MBD3-202ENST00000434436 NUTM2AQ8IVF1 878 aaPredicted RBP28.27■■■□□ 2.12
MBD3-202ENST00000434436 A0A0G2JLW4 131 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 SYCE3A1L190 88 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 STK3Q13188 491 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 ATP6V1DQ9Y5K8 247 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 AKAP11Q9UKA4 1901 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 ZAP70P43403 619 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 VGLL2Q8N8G2 317 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 RBSNQ9H1K0 784 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 CCDC87Q9NVE4 849 aa28.26■■■□□ 2.11
MBD3-202ENST00000434436 ATP6V1AP38606 617 aa28.25■■■□□ 2.11
MBD3-202ENST00000434436 LARP1BQ659C4 914 aaKnown RBP28.25■■■□□ 2.11
MBD3-202ENST00000434436 LRSAM1Q6UWE0 723 aa28.25■■■□□ 2.11
MBD3-202ENST00000434436 CNNM1Q9NRU3 951 aa28.25■■■□□ 2.11
MBD3-202ENST00000434436 VPS37CA5D8V6 355 aaPredicted RBP28.24■■■□□ 2.11
MBD3-202ENST00000434436 CRKLP46109 303 aaKnown RBP28.24■■■□□ 2.11
MBD3-202ENST00000434436 MYH14Q7Z406 1995 aaKnown RBP28.24■■■□□ 2.11
MBD3-202ENST00000434436 MYH7P12883 1935 aa28.24■■■□□ 2.11
MBD3-202ENST00000434436 PI16Q6UXB8 463 aa28.24■■■□□ 2.11
MBD3-202ENST00000434436 RREB1Q92766 1687 aa28.24■■■□□ 2.11
MBD3-202ENST00000434436 ABCC12Q96J65 1359 aa28.23■■■□□ 2.11
MBD3-202ENST00000434436 NWD2Q9ULI1 1742 aa28.23■■■□□ 2.11
MBD3-202ENST00000434436 LOC102724428A0A0B4J2F2 783 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms