RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 PRDM11Q9NQV5 511 aa14.23□□□□□ -0.13
LINC01090-202ENST00000434418 BLMP54132 1417 aaPredicted RBP14.23□□□□□ -0.13
LINC01090-202ENST00000434418 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
LINC01090-202ENST00000434418 KIAA0232Q92628 1395 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 TMEM229AB2RXF0 380 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 GDF10P55107 478 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 SRPK2P78362 688 aaKnown RBP14.22□□□□□ -0.13
LINC01090-202ENST00000434418 CLN3Q13286 438 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 NEUROD1Q13562 356 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 CHRNA2Q15822 529 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 FOXD4L5Q5VV16 416 aaPredicted RBP14.22□□□□□ -0.13
LINC01090-202ENST00000434418 TPCN2Q8NHX9 752 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 TRIM47Q96LD4 638 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 VRTNQ9H8Y1 702 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 DNAAF2Q9NVR5 837 aaKnown RBP14.22□□□□□ -0.13
LINC01090-202ENST00000434418 PPIP5K1Q6PFW1 1433 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 TRPM1Q7Z4N2 1603 aa14.22□□□□□ -0.13
LINC01090-202ENST00000434418 NBPF8Q3BBV2 869 aa14.21□□□□□ -0.13
LINC01090-202ENST00000434418 KRT27Q7Z3Y8 459 aa14.21□□□□□ -0.13
LINC01090-202ENST00000434418 NRKQ7Z2Y5 1582 aa14.21□□□□□ -0.14
LINC01090-202ENST00000434418 FIGNL2A6NMB9 653 aa14.2□□□□□ -0.14
LINC01090-202ENST00000434418 ZC3H6P61129 1189 aaKnown RBP14.2□□□□□ -0.14
LINC01090-202ENST00000434418 DEFB132Q7Z7B7 95 aa14.2□□□□□ -0.14
LINC01090-202ENST00000434418 CNKSR1Q969H4 720 aa14.2□□□□□ -0.14
LINC01090-202ENST00000434418 SENP2Q9HC62 589 aa14.2□□□□□ -0.14
LINC01090-202ENST00000434418 DNMT3LQ9UJW3 386 aa14.2□□□□□ -0.14
LINC01090-202ENST00000434418 TTLL8A6PVC2 850 aa14.19□□□□□ -0.14
LINC01090-202ENST00000434418 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
LINC01090-202ENST00000434418 ATP1A2P50993 1020 aa14.19□□□□□ -0.14
LINC01090-202ENST00000434418 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.19□□□□□ -0.14
LINC01090-202ENST00000434418 STRN4Q9NRL3 753 aa14.19□□□□□ -0.14
LINC01090-202ENST00000434418 SPATA31A5Q5VU36 1347 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 SPATA31A7Q8IWB4 1347 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 THSD7AQ9UPZ6 1657 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L15C9J2P7 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L10C9JJH3 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L13C9JLJ4 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L12C9JPN9 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L11C9JVI0 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L21D6R901 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L18D6R9N7 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L22D6RA61 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L17D6RBQ6 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L19D6RCP7 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L20D6RJB6 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 INHAP05111 366 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 USP17L24Q0WX57 530 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 FAM182BQ5T319 152 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 CCDC102BQ68D86 513 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 ABTB2Q8N961 1025 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 RNF217Q8TC41 542 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 ESYT1Q9BSJ8 1104 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 SERTAD1Q9UHV2 236 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 HRH3Q9Y5N1 445 aa14.18□□□□□ -0.14
LINC01090-202ENST00000434418 DKK1O94907 266 aa14.17□□□□□ -0.14
LINC01090-202ENST00000434418 PTK7Q13308 1070 aa14.17□□□□□ -0.14
LINC01090-202ENST00000434418 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
LINC01090-202ENST00000434418 NLRP3Q96P20 1036 aa14.17□□□□□ -0.14
LINC01090-202ENST00000434418 ZNF358Q9NW07 568 aa14.17□□□□□ -0.14
LINC01090-202ENST00000434418 SF3B2Q13435 895 aaKnown RBP14.16□□□□□ -0.14
LINC01090-202ENST00000434418 LARP1Q6PKG0 1096 aaKnown RBP14.16□□□□□ -0.14
LINC01090-202ENST00000434418 LARGE2Q8N3Y3 721 aa14.16□□□□□ -0.14
LINC01090-202ENST00000434418 KIFC2Q96AC6 838 aa14.16□□□□□ -0.14
LINC01090-202ENST00000434418 ROCK2O75116 1388 aaKnown RBP14.16□□□□□ -0.14
LINC01090-202ENST00000434418 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
LINC01090-202ENST00000434418 SIX5Q8N196 739 aa14.15□□□□□ -0.14
LINC01090-202ENST00000434418 PBXIP1Q96AQ6 731 aa14.15□□□□□ -0.14
LINC01090-202ENST00000434418 USP35Q9P2H5 1018 aa14.15□□□□□ -0.14
LINC01090-202ENST00000434418 USP19O94966 1318 aa14.15□□□□□ -0.15
LINC01090-202ENST00000434418 SPATA31A1Q5TZJ5 1347 aa14.15□□□□□ -0.15
LINC01090-202ENST00000434418 LMO7Q8WWI1 1683 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 CAMTA1Q9Y6Y1 1673 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 SFI1A8K8P3 1242 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 MAN1A2O60476 641 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 CABP1Q9NZU7 370 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 USP6P35125 1406 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 SSH2Q76I76 1423 aa14.14□□□□□ -0.15
LINC01090-202ENST00000434418 RNF144AP50876 292 aaPredicted RBP14.13□□□□□ -0.15
LINC01090-202ENST00000434418 CENPCQ03188 943 aa14.13□□□□□ -0.15
LINC01090-202ENST00000434418 DPYDQ12882 1025 aa14.13□□□□□ -0.15
LINC01090-202ENST00000434418 ZNF787Q6DD87 383 aa14.13□□□□□ -0.15
LINC01090-202ENST00000434418 FHDC1Q9C0D6 1143 aaPredicted RBP14.13□□□□□ -0.15
LINC01090-202ENST00000434418 PIK3C2AO00443 1686 aa14.13□□□□□ -0.15
LINC01090-202ENST00000434418 RGPD1P0DJD0 1748 aa14.12□□□□□ -0.15
LINC01090-202ENST00000434418 ZBTB7CA1YPR0 619 aa14.12□□□□□ -0.15
LINC01090-202ENST00000434418 TLR1Q15399 786 aa14.12□□□□□ -0.15
LINC01090-202ENST00000434418 TNS1Q9HBL0 1735 aaKnown RBP14.12□□□□□ -0.15
LINC01090-202ENST00000434418 EVC2Q86UK5 1308 aa14.12□□□□□ -0.15
LINC01090-202ENST00000434418 CPDO75976 1380 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 EVA1CP58658 441 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 SLC27A3Q5K4L6 730 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 PRICKLE2Q7Z3G6 844 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 NLRP13Q86W25 1043 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 ANKMY2Q8IV38 441 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 ARXQ96QS3 562 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 ZMIZ1Q9ULJ6 1067 aa14.11□□□□□ -0.15
LINC01090-202ENST00000434418 GCP02774 474 aa14.1□□□□□ -0.15
LINC01090-202ENST00000434418 GPC1P35052 558 aa14.1□□□□□ -0.15
LINC01090-202ENST00000434418 GRIP2Q9C0E4 1043 aa14.1□□□□□ -0.15
LINC01090-202ENST00000434418 USP3Q9Y6I4 520 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms