RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 MKNK1Q9BUB5 465 aa8.34□□□□□ -1.07
PTPN4-205ENST00000433888 ZBTB39O15060 712 aa8.33□□□□□ -1.08
PTPN4-205ENST00000433888 PTCD1O75127 700 aaKnown RBP8.33□□□□□ -1.08
PTPN4-205ENST00000433888 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
PTPN4-205ENST00000433888 COL13A1Q5TAT6 717 aaPredicted RBP8.33□□□□□ -1.08
PTPN4-205ENST00000433888 IL22RA1Q8N6P7 574 aa8.33□□□□□ -1.08
PTPN4-205ENST00000433888 OR13H1Q8NG92 308 aa8.33□□□□□ -1.08
PTPN4-205ENST00000433888 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
PTPN4-205ENST00000433888 GHRHP01286 108 aa8.32□□□□□ -1.08
PTPN4-205ENST00000433888 ZAP70P43403 619 aa8.32□□□□□ -1.08
PTPN4-205ENST00000433888 TMEM130Q8N3G9 435 aa8.32□□□□□ -1.08
PTPN4-205ENST00000433888 PIK3R5Q8WYR1 880 aa8.32□□□□□ -1.08
PTPN4-205ENST00000433888 UBAP1LF5GYI3 381 aa8.31□□□□□ -1.08
PTPN4-205ENST00000433888 GDF6Q6KF10 455 aaPredicted RBP8.31□□□□□ -1.08
PTPN4-205ENST00000433888 DZIP1LQ8IYY4 767 aaKnown RBP8.31□□□□□ -1.08
PTPN4-205ENST00000433888 FAM13BQ9NYF5 915 aa8.31□□□□□ -1.08
PTPN4-205ENST00000433888 STIM2Q9P246 746 aa8.31□□□□□ -1.08
PTPN4-205ENST00000433888 TRIM33Q9UPN9 1127 aa8.31□□□□□ -1.08
PTPN4-205ENST00000433888 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
PTPN4-205ENST00000433888 PBXIP1Q96AQ6 731 aa8.3□□□□□ -1.08
PTPN4-205ENST00000433888 SRA1Q9HD15 236 aaKnown RBP8.3□□□□□ -1.08
PTPN4-205ENST00000433888 ZFP64Q9NPA5 681 aa8.3□□□□□ -1.08
PTPN4-205ENST00000433888 TM4SF5O14894 197 aa8.29□□□□□ -1.08
PTPN4-205ENST00000433888 ALX3O95076 343 aa8.29□□□□□ -1.08
PTPN4-205ENST00000433888 ADAMTSL4Q6UY14 1074 aa8.29□□□□□ -1.08
PTPN4-205ENST00000433888 CACTIN-AS1Q8N1I8 211 aa8.29□□□□□ -1.08
PTPN4-205ENST00000433888 RBSNQ9H1K0 784 aa8.29□□□□□ -1.08
PTPN4-205ENST00000433888 F8W735 103 aaPredicted RBP8.28□□□□□ -1.08
PTPN4-205ENST00000433888 KIF4AO95239 1232 aa8.28□□□□□ -1.08
PTPN4-205ENST00000433888 Q6ZS46 218 aa8.28□□□□□ -1.08
PTPN4-205ENST00000433888 MAP4K3Q8IVH8 894 aa8.28□□□□□ -1.08
PTPN4-205ENST00000433888 GPR152Q8TDT2 470 aa8.28□□□□□ -1.08
PTPN4-205ENST00000433888 MRPL18Q9H0U6 180 aaKnown RBP8.28□□□□□ -1.08
PTPN4-205ENST00000433888 AKTIPQ9H8T0 292 aa8.28□□□□□ -1.08
PTPN4-205ENST00000433888 SEPT3Q9UH03 358 aa8.27□□□□□ -1.09
PTPN4-205ENST00000433888 FNDC3AQ9Y2H6 1198 aaKnown RBP8.27□□□□□ -1.09
PTPN4-205ENST00000433888 HYAL3O43820 417 aaPredicted RBP8.26□□□□□ -1.09
PTPN4-205ENST00000433888 ATP11AP98196 1134 aa8.26□□□□□ -1.09
PTPN4-205ENST00000433888 HYAL2Q12891 473 aa8.26□□□□□ -1.09
PTPN4-205ENST00000433888 LRP8Q14114 963 aa8.26□□□□□ -1.09
PTPN4-205ENST00000433888 PRR23CQ6ZRP0 262 aa8.26□□□□□ -1.09
PTPN4-205ENST00000433888 GALNT11Q8NCW6 608 aa8.26□□□□□ -1.09
PTPN4-205ENST00000433888 PSMG3-AS1Q96PY0 264 aa8.26□□□□□ -1.09
PTPN4-205ENST00000433888 CYP2E1P05181 493 aaPredicted RBP8.25□□□□□ -1.09
PTPN4-205ENST00000433888 ATP2B4P23634 1241 aa8.25□□□□□ -1.09
PTPN4-205ENST00000433888 ABTB2Q8N961 1025 aa8.25□□□□□ -1.09
PTPN4-205ENST00000433888 MUC3BQ9H195 1237 aa8.25□□□□□ -1.09
PTPN4-205ENST00000433888 ABI2Q9NYB9 513 aaPredicted RBP8.25□□□□□ -1.09
PTPN4-205ENST00000433888 PPME1Q9Y570 386 aa8.25□□□□□ -1.09
PTPN4-205ENST00000433888 TTC39BQ5VTQ0 682 aaPredicted RBP8.24□□□□□ -1.09
PTPN4-205ENST00000433888 CEP120Q8N960 986 aa8.24□□□□□ -1.09
PTPN4-205ENST00000433888 RASSF4Q9H2L5 321 aa8.24□□□□□ -1.09
PTPN4-205ENST00000433888 SERPINA10Q9UK55 444 aa8.24□□□□□ -1.09
PTPN4-205ENST00000433888 LINC01387J3KSC0 135 aa8.23□□□□□ -1.09
PTPN4-205ENST00000433888 CEP135Q66GS9 1140 aa8.23□□□□□ -1.09
PTPN4-205ENST00000433888 PDE12Q6L8Q7 609 aaKnown RBP8.23□□□□□ -1.09
PTPN4-205ENST00000433888 XKR5Q6UX68 686 aa8.23□□□□□ -1.09
PTPN4-205ENST00000433888 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
PTPN4-205ENST00000433888 ATCAYQ86WG3 371 aa8.23□□□□□ -1.09
PTPN4-205ENST00000433888 RNF112Q9ULX5 631 aa8.23□□□□□ -1.09
PTPN4-205ENST00000433888 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.23□□□□□ -1.09
PTPN4-205ENST00000433888 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
PTPN4-205ENST00000433888 DCAF11Q8TEB1 546 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 NUDT16Q96DE0 195 aaKnown RBP8.22□□□□□ -1.09
PTPN4-205ENST00000433888 CCDC97Q96F63 343 aaPredicted RBP8.22□□□□□ -1.09
PTPN4-205ENST00000433888 SPACA7Q96KW9 195 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 UBL7Q96S82 380 aaPredicted RBP8.22□□□□□ -1.09
PTPN4-205ENST00000433888 LACRTQ9GZZ8 138 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 ELP3Q9H9T3 547 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 KCNK4Q9NYG8 393 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 TMEM63CQ9P1W3 806 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 CNTN3Q9P232 1028 aa8.22□□□□□ -1.09
PTPN4-205ENST00000433888 SMNDC1O75940 238 aaKnown RBP eCLIP8.21□□□□□ -1.1
PTPN4-205ENST00000433888 WISP1O95388 367 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 CDC27P30260 824 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 SCNN1AP37088 669 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 SLC51AQ86UW1 340 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 POP1Q99575 1024 aaKnown RBP8.21□□□□□ -1.1
PTPN4-205ENST00000433888 KRTAP9-2Q9BYQ4 174 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 PBX4Q9BYU1 374 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 ADAM19Q9H013 955 aa8.21□□□□□ -1.1
PTPN4-205ENST00000433888 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
PTPN4-205ENST00000433888 TXNDC11Q6PKC3 985 aa8.2□□□□□ -1.1
PTPN4-205ENST00000433888 HELQQ8TDG4 1101 aa8.2□□□□□ -1.1
PTPN4-205ENST00000433888 GGNBP2Q9H3C7 697 aa8.2□□□□□ -1.1
PTPN4-205ENST00000433888 SALL4Q9UJQ4 1053 aa8.2□□□□□ -1.1
PTPN4-205ENST00000433888 ARID3CA6NKF2 412 aa8.19□□□□□ -1.1
PTPN4-205ENST00000433888 NFKBIEO00221 500 aa8.19□□□□□ -1.1
PTPN4-205ENST00000433888 CD68P34810 354 aaPredicted RBP8.19□□□□□ -1.1
PTPN4-205ENST00000433888 TMEM88BA6NKF7 163 aa8.18□□□□□ -1.1
PTPN4-205ENST00000433888 FSCN2O14926 492 aa8.18□□□□□ -1.1
PTPN4-205ENST00000433888 FSTP19883 344 aa8.18□□□□□ -1.1
PTPN4-205ENST00000433888 EPHA1P21709 976 aa8.18□□□□□ -1.1
PTPN4-205ENST00000433888 NBPF11Q86T75 865 aa8.18□□□□□ -1.1
PTPN4-205ENST00000433888 C1orf127Q8N9H9 656 aa8.18□□□□□ -1.1
PTPN4-205ENST00000433888 SH2B1Q9NRF2 756 aaPredicted RBP8.18□□□□□ -1.1
PTPN4-205ENST00000433888 GLB1P16278 677 aa8.17□□□□□ -1.1
PTPN4-205ENST00000433888 KIAA1211Q6ZU35 1233 aa8.17□□□□□ -1.1
PTPN4-205ENST00000433888 ZNF438Q7Z4V0 828 aa8.17□□□□□ -1.1
PTPN4-205ENST00000433888 ARMC10Q8N2F6 343 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms