RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
CCDC144CP-202ENST00000433419 ALDH1B1P30837 517 aa12.51□□□□□ -0.41
CCDC144CP-202ENST00000433419 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
CCDC144CP-202ENST00000433419 TRMT1LQ7Z2T5 733 aaKnown RBP12.51□□□□□ -0.41
CCDC144CP-202ENST00000433419 BEGAINQ9BUH8 593 aa12.51□□□□□ -0.41
CCDC144CP-202ENST00000433419 TBC1D2Q9BYX2 928 aa12.51□□□□□ -0.41
CCDC144CP-202ENST00000433419 TBCAO75347 108 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 HIBADHP31937 336 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 KANK3Q6NY19 840 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 BRF1Q92994 677 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 METTL22Q9BUU2 404 aaPredicted RBP12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 TMEM94Q12767 1356 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 SYCE3A1L190 88 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 PLS1Q14651 629 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 IQCEQ6IPM2 695 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 USP37Q86T82 979 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 SYCP3Q8IZU3 236 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 PARD3Q8TEW0 1356 aa12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 RNF113AO15541 343 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 MTERF4Q7Z6M4 381 aaKnown RBP12.5□□□□□ -0.41
CCDC144CP-202ENST00000433419 PA2G4Q9UQ80 394 aaKnown RBP12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 KIAA1328Q86T90 577 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 EYA2O00167 538 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 SPA17Q15506 151 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 TSHZ3Q63HK5 1081 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 DNAJC10Q8IXB1 793 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 CALML3P27482 149 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 FILIP1Q7Z7B0 1213 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 WDR66Q8TBY9 1149 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 PICK1Q9NRD5 415 aa12.49□□□□□ -0.41
CCDC144CP-202ENST00000433419 MAST1Q9Y2H9 1570 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 ARHGAP29Q52LW3 1261 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 MAGEB6Q8N7X4 407 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 QTRT2Q9H974 415 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 HCLS1P14317 486 aaPredicted RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 NUCB1Q02818 461 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 CCDC174Q6PII3 467 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 TEX11Q8IYF3 940 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 DDX17Q92841 729 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 MAP7D2Q96T17 732 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 ITGA6P23229 1130 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 IL13P35225 146 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 NAPAP54920 295 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 NCBP1Q09161 790 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 PUM3Q15397 648 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 SEPT7Q16181 437 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 HEATR3Q7Z4Q2 680 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 ZSCAN16Q9H4T2 348 aaPredicted RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 RBM8AQ9Y5S9 174 aaKnown RBP12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 RTL9Q8NET4 1388 aa12.48□□□□□ -0.41
CCDC144CP-202ENST00000433419 BIN2Q9UBW5 565 aaPredicted RBP12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 MAGI2Q86UL8 1455 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 ZRSR2Q15696 482 aaKnown RBP12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 TCERG1LQ5VWI1 586 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 NIM1KQ8IY84 436 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 FSIP1Q8NA03 581 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 RRP36Q96EU6 259 aaKnown RBP12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 DDX19AQ9NUU7 478 aaKnown RBP12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 GPR162Q16538 588 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 CAMK4Q16566 473 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 YEATS2Q9ULM3 1422 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 ADGRL2O95490 1459 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 GOLGA6L10A6NI86 522 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 A1BGP04217 495 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 SDSP20132 328 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 TFCP2Q12800 502 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 CCDC40Q4G0X9 1142 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 MIGA1Q8NAN2 632 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 BICD1Q96G01 975 aa12.47□□□□□ -0.41
CCDC144CP-202ENST00000433419 SSFA2P28290 1259 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 GJB2P29033 226 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 ANAPC15P60006 121 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 FAM114A1Q8IWE2 563 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 STX6O43752 255 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 RXRBP28702 533 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 CCDC102BQ68D86 513 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 TMOD4Q9NZQ9 345 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 CFAP74Q9C0B2 1584 aa12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 BICC1Q9H694 974 aaKnown RBP12.46□□□□□ -0.41
CCDC144CP-202ENST00000433419 NPHP4O75161 1426 aaPredicted RBP12.46□□□□□ -0.42
CCDC144CP-202ENST00000433419 GNA11P29992 359 aa12.46□□□□□ -0.42
CCDC144CP-202ENST00000433419 ALG1Q9BT22 464 aa12.46□□□□□ -0.42
CCDC144CP-202ENST00000433419 ESPNB1AK53 854 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 MTIF2P46199 727 aaKnown RBP12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 KRT24Q2M2I5 525 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 TBC1D22AQ8WUA7 517 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 NPC1L1Q9UHC9 1359 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 BRDTQ58F21 947 aaPredicted RBP12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 DPY19L2Q6NUT2 758 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 FAM196AQ6ZSG2 479 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 RAB11FIP4Q86YS3 637 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 CCDC112Q8NEF3 446 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 PBRM1Q86U86 1689 aa12.45□□□□□ -0.42
CCDC144CP-202ENST00000433419 CCDC183Q5T5S1 534 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms