RNA–Protein interactions for RNA: ENST00000433061.1

LINC01278-201, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 3 BASIC

Gene LINC01278, Length 529 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-201ENST00000433061 NUP98P52948 1817 aa16.75■□□□□ 0.27
LINC01278-201ENST00000433061 ALDH1A1P00352 501 aa16.74■□□□□ 0.27
LINC01278-201ENST00000433061 MYCP01106 439 aaPredicted RBP16.74■□□□□ 0.27
LINC01278-201ENST00000433061 MYL6BP14649 208 aa16.74■□□□□ 0.27
LINC01278-201ENST00000433061 GRAPQ13588 217 aa16.74■□□□□ 0.27
LINC01278-201ENST00000433061 GRAPLQ8TC17 118 aaPredicted RBP16.74■□□□□ 0.27
LINC01278-201ENST00000433061 CD99L2Q8TCZ2 262 aa16.74■□□□□ 0.27
LINC01278-201ENST00000433061 UTP14AQ9BVJ6 771 aaKnown RBP16.74■□□□□ 0.27
LINC01278-201ENST00000433061 NSFL1CQ9UNZ2 370 aaKnown RBP16.74■□□□□ 0.27
LINC01278-201ENST00000433061 HCLS1P14317 486 aaPredicted RBP16.73■□□□□ 0.27
LINC01278-201ENST00000433061 MCM10Q7L590 875 aa16.73■□□□□ 0.27
LINC01278-201ENST00000433061 DPF3Q92784 378 aa16.73■□□□□ 0.27
LINC01278-201ENST00000433061 ERO1AQ96HE7 468 aa16.73■□□□□ 0.27
LINC01278-201ENST00000433061 EFCC1Q9HA90 598 aa16.73■□□□□ 0.27
LINC01278-201ENST00000433061 PRKG1Q13976 671 aa16.72■□□□□ 0.27
LINC01278-201ENST00000433061 PARP10Q53GL7 1025 aa16.72■□□□□ 0.27
LINC01278-201ENST00000433061 SLC10A5Q5PT55 438 aa16.72■□□□□ 0.27
LINC01278-201ENST00000433061 DUOX1Q9NRD9 1551 aa16.72■□□□□ 0.27
LINC01278-201ENST00000433061 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
LINC01278-201ENST00000433061 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
LINC01278-201ENST00000433061 ZNF333Q96JL9 665 aa16.71■□□□□ 0.27
LINC01278-201ENST00000433061 G3V3G9 751 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 VIL1P09327 827 aaKnown RBP16.7■□□□□ 0.26
LINC01278-201ENST00000433061 NF2P35240 595 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 DCAF8Q5TAQ9 597 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 IFNL1Q8IU54 200 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 PHACTR3Q96KR7 559 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 MIS18AQ9NYP9 233 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 POLLQ9UGP5 575 aa16.7■□□□□ 0.26
LINC01278-201ENST00000433061 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
LINC01278-201ENST00000433061 SLC9C1Q4G0N8 1177 aa16.69■□□□□ 0.26
LINC01278-201ENST00000433061 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
LINC01278-201ENST00000433061 NBPF11Q86T75 865 aa16.69■□□□□ 0.26
LINC01278-201ENST00000433061 EYA3Q99504 573 aa16.69■□□□□ 0.26
LINC01278-201ENST00000433061 PITPNM2Q9BZ72 1349 aa16.69■□□□□ 0.26
LINC01278-201ENST00000433061 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
LINC01278-201ENST00000433061 SPRYD7Q5W111 196 aa16.68■□□□□ 0.26
LINC01278-201ENST00000433061 ARMC9Q7Z3E5 817 aa16.68■□□□□ 0.26
LINC01278-201ENST00000433061 TMC4Q7Z404 712 aa16.68■□□□□ 0.26
LINC01278-201ENST00000433061 MYOZ2Q9NPC6 264 aa16.68■□□□□ 0.26
LINC01278-201ENST00000433061 ZNF609O15014 1411 aa16.68■□□□□ 0.26
LINC01278-201ENST00000433061 GPSM2P81274 684 aa16.67■□□□□ 0.26
LINC01278-201ENST00000433061 MANSC4A6NHS7 340 aaPredicted RBP16.66■□□□□ 0.26
LINC01278-201ENST00000433061 WTIPA6NIX2 430 aaPredicted RBP16.66■□□□□ 0.26
LINC01278-201ENST00000433061 PRKAR2BP31323 418 aa16.66■□□□□ 0.26
LINC01278-201ENST00000433061 RSBN1LQ6PCB5 846 aaPredicted RBP16.66■□□□□ 0.26
LINC01278-201ENST00000433061 LRCH3Q96II8 777 aa16.66■□□□□ 0.26
LINC01278-201ENST00000433061 IGF2BP3O00425 579 aaKnown RBP eCLIP16.65■□□□□ 0.26
LINC01278-201ENST00000433061 SOX1O00570 391 aaPredicted RBP16.65■□□□□ 0.26
LINC01278-201ENST00000433061 USP17L8P0C7I0 530 aa16.65■□□□□ 0.26
LINC01278-201ENST00000433061 CRHR2Q13324 411 aa16.65■□□□□ 0.26
LINC01278-201ENST00000433061 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
LINC01278-201ENST00000433061 AGBL3Q8NEM8 1001 aa16.65■□□□□ 0.26
LINC01278-201ENST00000433061 ZNF428Q96B54 188 aa16.65■□□□□ 0.26
LINC01278-201ENST00000433061 COL25A1Q9BXS0 654 aaPredicted RBP16.65■□□□□ 0.26
LINC01278-201ENST00000433061 ZC3H12CQ9C0D7 883 aaKnown RBP16.65■□□□□ 0.26
LINC01278-201ENST00000433061 PTCH2Q9Y6C5 1203 aa16.65■□□□□ 0.26
LINC01278-201ENST00000433061 INHBEP58166 350 aa16.64■□□□□ 0.25
LINC01278-201ENST00000433061 CAP1Q01518 475 aa16.64■□□□□ 0.25
LINC01278-201ENST00000433061 SP3Q02447 781 aa16.64■□□□□ 0.25
LINC01278-201ENST00000433061 NBPF9Q3BBW0 867 aa16.64■□□□□ 0.25
LINC01278-201ENST00000433061 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
LINC01278-201ENST00000433061 ANGEL1Q9UNK9 670 aaKnown RBP16.64■□□□□ 0.25
LINC01278-201ENST00000433061 TAF1P21675 1872 aa16.64■□□□□ 0.25
LINC01278-201ENST00000433061 UNC80Q8N2C7 3258 aa16.64■□□□□ 0.25
LINC01278-201ENST00000433061 TAF7Q15545 349 aaPredicted RBP16.63■□□□□ 0.25
LINC01278-201ENST00000433061 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
LINC01278-201ENST00000433061 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
LINC01278-201ENST00000433061 SLC10A4Q96EP9 437 aa16.63■□□□□ 0.25
LINC01278-201ENST00000433061 FZD1Q9UP38 647 aa16.63■□□□□ 0.25
LINC01278-201ENST00000433061 LAMA3Q16787 3333 aa16.63■□□□□ 0.25
LINC01278-201ENST00000433061 LAMB2P55268 1798 aa16.62■□□□□ 0.25
LINC01278-201ENST00000433061 CC2D1BQ5T0F9 858 aaKnown RBP16.62■□□□□ 0.25
LINC01278-201ENST00000433061 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
LINC01278-201ENST00000433061 PRO3102Q9H379 93 aa16.62■□□□□ 0.25
LINC01278-201ENST00000433061 LAMB4A4D0S4 1761 aa16.61■□□□□ 0.25
LINC01278-201ENST00000433061 SCN9AQ15858 1988 aa16.61■□□□□ 0.25
LINC01278-201ENST00000433061 CNGB1Q14028 1251 aaPredicted RBP16.61■□□□□ 0.25
LINC01278-201ENST00000433061 OTUD7BQ6GQQ9 843 aa16.61■□□□□ 0.25
LINC01278-201ENST00000433061 SH3TC2Q8TF17 1288 aa16.61■□□□□ 0.25
LINC01278-201ENST00000433061 DDX60Q8IY21 1712 aaKnown RBP16.6■□□□□ 0.25
LINC01278-201ENST00000433061 ANKRD36CQ5JPF3 1778 aa16.6■□□□□ 0.25
LINC01278-201ENST00000433061 LDLRAD1Q5T700 205 aa16.6■□□□□ 0.25
LINC01278-201ENST00000433061 NLRP10Q86W26 655 aa16.6■□□□□ 0.25
LINC01278-201ENST00000433061 WNK4Q96J92 1243 aa16.6■□□□□ 0.25
LINC01278-201ENST00000433061 RSPH6AQ9H0K4 717 aa16.6■□□□□ 0.25
LINC01278-201ENST00000433061 SH3TC1Q8TE82 1336 aa16.6■□□□□ 0.25
LINC01278-201ENST00000433061 LRRC37AA6NMS7 1700 aa16.59■□□□□ 0.25
LINC01278-201ENST00000433061 UFL1O94874 794 aa16.59■□□□□ 0.25
LINC01278-201ENST00000433061 ARHGEF6Q15052 776 aa16.59■□□□□ 0.25
LINC01278-201ENST00000433061 NECTIN2Q92692 538 aa16.59■□□□□ 0.25
LINC01278-201ENST00000433061 GMLQ99445 158 aa16.59■□□□□ 0.25
LINC01278-201ENST00000433061 CLMNQ96JQ2 1002 aa16.58■□□□□ 0.24
LINC01278-201ENST00000433061 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
LINC01278-201ENST00000433061 NR2E3Q9Y5X4 410 aa16.58■□□□□ 0.24
LINC01278-201ENST00000433061 COL3A1P02461 1466 aaPredicted RBP16.58■□□□□ 0.24
LINC01278-201ENST00000433061 SASH1O94885 1247 aa16.57■□□□□ 0.24
LINC01278-201ENST00000433061 ZBTB48P10074 688 aaPredicted RBP16.57■□□□□ 0.24
LINC01278-201ENST00000433061 DEFB123Q8N688 67 aa16.57■□□□□ 0.24
LINC01278-201ENST00000433061 HTATIP2Q9BUP3 242 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms