RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 DOK7Q18PE1 504 aa20.86■□□□□ 0.93
NUP50-209ENST00000432340 MANSC4A6NHS7 340 aaPredicted RBP20.85■□□□□ 0.93
NUP50-209ENST00000432340 DCTN1Q14203 1278 aa20.85■□□□□ 0.93
NUP50-209ENST00000432340 ARHGEF6Q15052 776 aa20.85■□□□□ 0.93
NUP50-209ENST00000432340 PTPN22Q9Y2R2 807 aa20.85■□□□□ 0.93
NUP50-209ENST00000432340 ZNF609O15014 1411 aa20.85■□□□□ 0.93
NUP50-209ENST00000432340 ASTN2O75129 1339 aaPredicted RBP20.84■□□□□ 0.93
NUP50-209ENST00000432340 U2AF1L5P0DN76 240 aaPredicted RBP20.84■□□□□ 0.93
NUP50-209ENST00000432340 EN2P19622 333 aaPredicted RBP20.84■□□□□ 0.93
NUP50-209ENST00000432340 EIF4A1P60842 406 aaKnown RBP20.84■□□□□ 0.93
NUP50-209ENST00000432340 U2AF1Q01081 240 aaKnown RBP eCLIP20.84■□□□□ 0.93
NUP50-209ENST00000432340 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
NUP50-209ENST00000432340 NBPF11Q86T75 865 aa20.84■□□□□ 0.93
NUP50-209ENST00000432340 MYOZ2Q9NPC6 264 aa20.84■□□□□ 0.93
NUP50-209ENST00000432340 MIS18AQ9NYP9 233 aa20.84■□□□□ 0.93
NUP50-209ENST00000432340 POLLQ9UGP5 575 aa20.84■□□□□ 0.93
NUP50-209ENST00000432340 MKRN3Q13064 507 aaKnown RBP20.83■□□□□ 0.93
NUP50-209ENST00000432340 OTUD7BQ6GQQ9 843 aa20.83■□□□□ 0.93
NUP50-209ENST00000432340 NLRP10Q86W26 655 aa20.83■□□□□ 0.93
NUP50-209ENST00000432340 MOB2Q70IA6 237 aa20.82■□□□□ 0.92
NUP50-209ENST00000432340 EFCC1Q9HA90 598 aa20.82■□□□□ 0.92
NUP50-209ENST00000432340 KCNQ5Q9NR82 932 aa20.82■□□□□ 0.92
NUP50-209ENST00000432340 OGFOD1Q8N543 542 aa20.81■□□□□ 0.92
NUP50-209ENST00000432340 TBC1D16Q8TBP0 767 aa20.81■□□□□ 0.92
NUP50-209ENST00000432340 PER1O15534 1290 aaPredicted RBP20.8■□□□□ 0.92
NUP50-209ENST00000432340 MMP14P50281 582 aa20.8■□□□□ 0.92
NUP50-209ENST00000432340 GPSM2P81274 684 aa20.8■□□□□ 0.92
NUP50-209ENST00000432340 SPRYD7Q5W111 196 aa20.8■□□□□ 0.92
NUP50-209ENST00000432340 DUOX1Q9NRD9 1551 aa20.8■□□□□ 0.92
NUP50-209ENST00000432340 H0YGN5 161 aa20.79■□□□□ 0.92
NUP50-209ENST00000432340 SF3B3Q15393 1217 aaKnown RBP20.79■□□□□ 0.92
NUP50-209ENST00000432340 SLC4A8Q2Y0W8 1093 aa20.79■□□□□ 0.92
NUP50-209ENST00000432340 IFNL1Q8IU54 200 aa20.79■□□□□ 0.92
NUP50-209ENST00000432340 R3HDMLQ9H3Y0 253 aa20.79■□□□□ 0.92
NUP50-209ENST00000432340 NUP98P52948 1817 aa20.78■□□□□ 0.92
NUP50-209ENST00000432340 HSP90B1P14625 803 aaKnown RBP20.78■□□□□ 0.92
NUP50-209ENST00000432340 OTUD5Q96G74 571 aa20.78■□□□□ 0.92
NUP50-209ENST00000432340 PODXL2Q9NZ53 605 aa20.78■□□□□ 0.92
NUP50-209ENST00000432340 ANKIB1Q9P2G1 1089 aa20.78■□□□□ 0.92
NUP50-209ENST00000432340 LAMB4A4D0S4 1761 aa20.77■□□□□ 0.92
NUP50-209ENST00000432340 ZBTB48P10074 688 aaPredicted RBP20.77■□□□□ 0.92
NUP50-209ENST00000432340 PTPN12Q05209 780 aaKnown RBP20.77■□□□□ 0.92
NUP50-209ENST00000432340 CELF1Q92879 486 aaKnown RBP20.77■□□□□ 0.92
NUP50-209ENST00000432340 GGA1Q9UJY5 639 aa20.77■□□□□ 0.92
NUP50-209ENST00000432340 UFL1O94874 794 aa20.76■□□□□ 0.91
NUP50-209ENST00000432340 RPS8P62241 208 aaKnown RBP20.76■□□□□ 0.91
NUP50-209ENST00000432340 CHRDL2Q6WN34 429 aa20.76■□□□□ 0.91
NUP50-209ENST00000432340 PODNQ7Z5L7 613 aa20.76■□□□□ 0.91
NUP50-209ENST00000432340 SLC10A4Q96EP9 437 aa20.76■□□□□ 0.91
NUP50-209ENST00000432340 USP17L3A6NCW0 530 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 USP17L4A6NCW7 530 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 UNCXA6NJT0 531 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 MNX1P50219 401 aaPredicted RBP20.75■□□□□ 0.91
NUP50-209ENST00000432340 SLC9C1Q4G0N8 1177 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 USP17L1Q7RTZ2 530 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 ZNF333Q96JL9 665 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 CLSPNQ9HAW4 1339 aa20.75■□□□□ 0.91
NUP50-209ENST00000432340 KIAA0100Q14667 2235 aaKnown RBP20.74■□□□□ 0.91
NUP50-209ENST00000432340 SP3Q02447 781 aa20.74■□□□□ 0.91
NUP50-209ENST00000432340 LDLRAD1Q5T700 205 aa20.74■□□□□ 0.91
NUP50-209ENST00000432340 APOBEC3FQ8IUX4 373 aaKnown RBP20.74■□□□□ 0.91
NUP50-209ENST00000432340 GMLQ99445 158 aa20.74■□□□□ 0.91
NUP50-209ENST00000432340 TRIOBPQ9H2D6 2365 aa20.74■□□□□ 0.91
NUP50-209ENST00000432340 EIF2S2P20042 333 aaKnown RBP20.73■□□□□ 0.91
NUP50-209ENST00000432340 PRAMEF18Q5VWM3 479 aa20.73■□□□□ 0.91
NUP50-209ENST00000432340 CD99L2Q8TCZ2 262 aa20.73■□□□□ 0.91
NUP50-209ENST00000432340 THUMPD2Q9BTF0 503 aaKnown RBP20.73■□□□□ 0.91
NUP50-209ENST00000432340 MYO3BQ8WXR4 1341 aa20.73■□□□□ 0.91
NUP50-209ENST00000432340 COPS6Q7L5N1 327 aa20.72■□□□□ 0.91
NUP50-209ENST00000432340 LRP10Q7Z4F1 713 aa20.72■□□□□ 0.91
NUP50-209ENST00000432340 ANGEL1Q9UNK9 670 aaKnown RBP20.72■□□□□ 0.91
NUP50-209ENST00000432340 PPP1R12BO60237 982 aaPredicted RBP20.71■□□□□ 0.91
NUP50-209ENST00000432340 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
NUP50-209ENST00000432340 LRRC37AA6NMS7 1700 aa20.7■□□□□ 0.9
NUP50-209ENST00000432340 AIMP1Q12904 312 aaKnown RBP20.7■□□□□ 0.9
NUP50-209ENST00000432340 PDIA6Q15084 440 aa20.7■□□□□ 0.9
NUP50-209ENST00000432340 RBM27Q9P2N5 1060 aaKnown RBP20.7■□□□□ 0.9
NUP50-209ENST00000432340 DDX60Q8IY21 1712 aaKnown RBP20.7■□□□□ 0.9
NUP50-209ENST00000432340 ANKRD36CQ5JPF3 1778 aa20.69■□□□□ 0.9
NUP50-209ENST00000432340 POLR2AP24928 1970 aaKnown RBP20.69■□□□□ 0.9
NUP50-209ENST00000432340 WNT10BO00744 389 aa20.69■□□□□ 0.9
NUP50-209ENST00000432340 CRHR2Q13324 411 aa20.69■□□□□ 0.9
NUP50-209ENST00000432340 PRKG1Q13976 671 aa20.69■□□□□ 0.9
NUP50-209ENST00000432340 CNGB1Q14028 1251 aaPredicted RBP20.69■□□□□ 0.9
NUP50-209ENST00000432340 XAGE3Q8WTP9 111 aa20.69■□□□□ 0.9
NUP50-209ENST00000432340 DPF3Q92784 378 aa20.69■□□□□ 0.9
NUP50-209ENST00000432340 A0A1W2PPC1 479 aa20.68■□□□□ 0.9
NUP50-209ENST00000432340 WDHD1O75717 1129 aaPredicted RBP20.68■□□□□ 0.9
NUP50-209ENST00000432340 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
NUP50-209ENST00000432340 SCAF8Q9UPN6 1271 aaKnown RBP20.68■□□□□ 0.9
NUP50-209ENST00000432340 NR2E3Q9Y5X4 410 aa20.68■□□□□ 0.9
NUP50-209ENST00000432340 RBBP6Q7Z6E9 1792 aaKnown RBP20.67■□□□□ 0.9
NUP50-209ENST00000432340 IGF2BP3O00425 579 aaKnown RBP eCLIP20.67■□□□□ 0.9
NUP50-209ENST00000432340 MAP3K11Q16584 847 aa20.67■□□□□ 0.9
NUP50-209ENST00000432340 WNK4Q96J92 1243 aa20.67■□□□□ 0.9
NUP50-209ENST00000432340 HTATIP2Q9BUP3 242 aa20.67■□□□□ 0.9
NUP50-209ENST00000432340 XDHP47989 1333 aa20.67■□□□□ 0.9
NUP50-209ENST00000432340 ATP2B4P23634 1241 aa20.66■□□□□ 0.9
NUP50-209ENST00000432340 NKX2-3Q8TAU0 364 aa20.66■□□□□ 0.9
NUP50-209ENST00000432340 FAM89AQ96GI7 184 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms