RNA–Protein interactions for RNA: ENST00000431496.1

AC055876.3-201, humanhuman

BASIC

Gene AC055876.3, Length 288 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055876.3-201ENST00000431496 ZC3H12CQ9C0D7 883 aaKnown RBP20.78■□□□□ 0.92
AC055876.3-201ENST00000431496 KCNQ5Q9NR82 932 aa20.78■□□□□ 0.92
AC055876.3-201ENST00000431496 ANKIB1Q9P2G1 1089 aa20.78■□□□□ 0.92
AC055876.3-201ENST00000431496 ZNF316A6NFI3 1004 aaPredicted RBP20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 ANP32CO43423 234 aa20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 ECE2O60344 883 aa20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 SLC4A2P04920 1241 aa20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 G2E3Q7L622 706 aa20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 MICALL2Q8IY33 904 aa20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 AIDAQ96BJ3 306 aa20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 GLIS2Q9BZE0 524 aaPredicted RBP20.77■□□□□ 0.92
AC055876.3-201ENST00000431496 NEXNQ0ZGT2 675 aa20.76■□□□□ 0.91
AC055876.3-201ENST00000431496 UFL1O94874 794 aa20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 RPS12P25398 132 aaKnown RBP20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 CTCFP49711 727 aaPredicted RBP20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 CDC37L1Q7L3B6 337 aa20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 ANKRD18AQ8IVF6 992 aa20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 GGA1Q9UJY5 639 aa20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 TLL2Q9Y6L7 1015 aa20.75■□□□□ 0.91
AC055876.3-201ENST00000431496 RTL9Q8NET4 1388 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 NEURL1BA8MQ27 555 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 CELF2O95319 508 aaKnown RBP20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 CTSWP56202 376 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 MAP2K1Q02750 393 aaPredicted RBP20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 SAMD7Q7Z3H4 446 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 WDR63Q8IWG1 891 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 TTLL11Q8NHH1 800 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 CAPNS2Q96L46 248 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 TRPM7Q96QT4 1865 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 PRDM10Q9NQV6 1147 aa20.74■□□□□ 0.91
AC055876.3-201ENST00000431496 H7C1W4 665 aa20.73■□□□□ 0.91
AC055876.3-201ENST00000431496 VIL1P09327 827 aaKnown RBP20.73■□□□□ 0.91
AC055876.3-201ENST00000431496 ECE1P42892 770 aa20.73■□□□□ 0.91
AC055876.3-201ENST00000431496 G3V3G9 751 aa20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 TBC1D10BQ4KMP7 808 aaPredicted RBP20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 DCAF8Q5TAQ9 597 aa20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 CYP4F22Q6NT55 531 aa20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 PAXIP1Q6ZW49 1069 aaPredicted RBP20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 SAPCD2Q86UD0 394 aa20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 CDC5LQ99459 802 aaKnown RBP20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 SALL2Q9Y467 1007 aaPredicted RBP20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 XDHP47989 1333 aa20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 FANCIQ9NVI1 1328 aa20.72■□□□□ 0.91
AC055876.3-201ENST00000431496 VAMP4O75379 141 aa20.71■□□□□ 0.91
AC055876.3-201ENST00000431496 CAPN15O75808 1086 aa20.71■□□□□ 0.91
AC055876.3-201ENST00000431496 FLIIQ13045 1269 aa20.71■□□□□ 0.91
AC055876.3-201ENST00000431496 USP48Q86UV5 1035 aa20.71■□□□□ 0.91
AC055876.3-201ENST00000431496 EGFRP00533 1210 aa20.7■□□□□ 0.9
AC055876.3-201ENST00000431496 ATP2B4P23634 1241 aa20.7■□□□□ 0.9
AC055876.3-201ENST00000431496 RBM26Q5T8P6 1007 aaKnown RBP20.7■□□□□ 0.9
AC055876.3-201ENST00000431496 GREM2Q9H772 168 aa20.7■□□□□ 0.9
AC055876.3-201ENST00000431496 BSDC1Q9NW68 430 aaPredicted RBP20.7■□□□□ 0.9
AC055876.3-201ENST00000431496 LBX1P52954 281 aa20.69■□□□□ 0.9
AC055876.3-201ENST00000431496 GRM1Q13255 1194 aa20.69■□□□□ 0.9
AC055876.3-201ENST00000431496 GCKRQ14397 625 aa20.69■□□□□ 0.9
AC055876.3-201ENST00000431496 UBE3BQ7Z3V4 1068 aa20.69■□□□□ 0.9
AC055876.3-201ENST00000431496 HHIPL1Q96JK4 782 aa20.69■□□□□ 0.9
AC055876.3-201ENST00000431496 MINPP1Q9UNW1 487 aa20.69■□□□□ 0.9
AC055876.3-201ENST00000431496 WTIPA6NIX2 430 aaPredicted RBP20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 MAP2K2P36507 400 aa20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 EXOSC9Q06265 439 aaKnown RBP20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 FKBP5Q13451 457 aaPredicted RBP20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 DNAAF4Q8WXU2 420 aa20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 ZNF408Q9H9D4 720 aa20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 SCN9AQ15858 1988 aa20.68■□□□□ 0.9
AC055876.3-201ENST00000431496 HSPA8P11142 646 aaKnown RBP20.67■□□□□ 0.9
AC055876.3-201ENST00000431496 DLK2Q6UY11 383 aa20.67■□□□□ 0.9
AC055876.3-201ENST00000431496 KRT26Q7Z3Y9 468 aa20.67■□□□□ 0.9
AC055876.3-201ENST00000431496 AGBL3Q8NEM8 1001 aa20.67■□□□□ 0.9
AC055876.3-201ENST00000431496 LINS1Q8NG48 757 aa20.67■□□□□ 0.9
AC055876.3-201ENST00000431496 PLA2G12BQ9BX93 195 aa20.67■□□□□ 0.9
AC055876.3-201ENST00000431496 POLR2AP24928 1970 aaKnown RBP20.66■□□□□ 0.9
AC055876.3-201ENST00000431496 CASP7P55210 303 aa20.66■□□□□ 0.9
AC055876.3-201ENST00000431496 RSBN1LQ6PCB5 846 aaPredicted RBP20.66■□□□□ 0.9
AC055876.3-201ENST00000431496 PODNQ7Z5L7 613 aa20.66■□□□□ 0.9
AC055876.3-201ENST00000431496 DCPSQ96C86 337 aaKnown RBP20.66■□□□□ 0.9
AC055876.3-201ENST00000431496 MYH16Q9H6N6 1097 aa20.66■□□□□ 0.9
AC055876.3-201ENST00000431496 AOC2O75106 756 aa20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 ZNF280AP59817 542 aaPredicted RBP20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 KIF4BQ2VIQ3 1234 aa20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 GMLQ99445 158 aa20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 BEGAINQ9BUH8 593 aa20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 CACNA1FO60840 1977 aa20.65■□□□□ 0.9
AC055876.3-201ENST00000431496 USP17L3A6NCW0 530 aa20.64■□□□□ 0.89
AC055876.3-201ENST00000431496 USP17L4A6NCW7 530 aa20.64■□□□□ 0.89
AC055876.3-201ENST00000431496 CSF1RP07333 972 aa20.64■□□□□ 0.89
AC055876.3-201ENST00000431496 CCT4P50991 539 aaKnown RBP20.64■□□□□ 0.89
AC055876.3-201ENST00000431496 USP17L1Q7RTZ2 530 aa20.64■□□□□ 0.89
AC055876.3-201ENST00000431496 ITGA6P23229 1130 aa20.63■□□□□ 0.89
AC055876.3-201ENST00000431496 IGHMBP2P38935 993 aaKnown RBP20.63■□□□□ 0.89
AC055876.3-201ENST00000431496 FAM9BQ8IZU0 186 aa20.63■□□□□ 0.89
AC055876.3-201ENST00000431496 MYH3P11055 1940 aa20.63■□□□□ 0.89
AC055876.3-201ENST00000431496 ZNF609O15014 1411 aa20.62■□□□□ 0.89
AC055876.3-201ENST00000431496 MED23Q9ULK4 1368 aa20.62■□□□□ 0.89
AC055876.3-201ENST00000431496 ADM5C9JUS6 153 aa20.62■□□□□ 0.89
AC055876.3-201ENST00000431496 USP17L8P0C7I0 530 aa20.62■□□□□ 0.89
AC055876.3-201ENST00000431496 HUNKP57058 714 aa20.62■□□□□ 0.89
AC055876.3-201ENST00000431496 LEMD3Q9Y2U8 911 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms