RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 C7orf69Q9H7B7 122 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 BCS1LQ9Y276 419 aa4.57□□□□□ -1.68
CDC40-204ENST00000431461 RBM19Q9Y4C8 960 aaKnown RBP4.57□□□□□ -1.68
CDC40-204ENST00000431461 POM121CA8CG34 1229 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 J3QW42 95 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 PRRG2O14669 202 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 GRNP28799 593 aaKnown RBP4.56□□□□□ -1.68
CDC40-204ENST00000431461 SEC13P55735 322 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 ABI1Q8IZP0 508 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 GIMAP7Q8NHV1 300 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 UTP4Q969X6 686 aaKnown RBP4.56□□□□□ -1.68
CDC40-204ENST00000431461 MYRFLQ96LU7 910 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 FAM83CQ9BQN1 747 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 KRTAP9-3Q9BYQ3 159 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 ANGEL1Q9UNK9 670 aaKnown RBP4.56□□□□□ -1.68
CDC40-204ENST00000431461 USP20Q9Y2K6 914 aa4.56□□□□□ -1.68
CDC40-204ENST00000431461 PRNPP04156 253 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 INPP5BP32019 993 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 KRTAP19-4Q3LI73 84 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 ERICH6Q7L0X2 663 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 TRIM42Q8IWZ5 723 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 IL22RA1Q8N6P7 574 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 NSUN5Q96P11 429 aaKnown RBP4.55□□□□□ -1.68
CDC40-204ENST00000431461 KLK14Q9P0G3 267 aa4.55□□□□□ -1.68
CDC40-204ENST00000431461 HOXD8P13378 290 aaPredicted RBP4.54□□□□□ -1.68
CDC40-204ENST00000431461 CDC25BP30305 580 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 IDH3AP50213 366 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 TMEM132AQ24JP5 1023 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 TXNDC11Q6PKC3 985 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 PLD4Q96BZ4 506 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 IFT43Q96FT9 208 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 RBSNQ9H1K0 784 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 PIM2Q9P1W9 311 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 HIF3AQ9Y2N7 669 aa4.54□□□□□ -1.68
CDC40-204ENST00000431461 LOC102724428A0A0B4J2F2 783 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 HMX2A2RU54 273 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 WISP1O95388 367 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 EGFRP00533 1210 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 IGFBP4P22692 258 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 SIK1P57059 783 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 FLIIQ13045 1269 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 FAM20CQ8IXL6 584 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 SHKBP1Q8TBC3 707 aa4.53□□□□□ -1.68
CDC40-204ENST00000431461 TLR7Q9NYK1 1049 aaKnown RBP4.53□□□□□ -1.68
CDC40-204ENST00000431461 GHRHP01286 108 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 SOX18P35713 384 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 ARSDP51689 593 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 ACAD11Q709F0 780 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 VSIG10LQ86VR7 867 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 HINFPQ9BQA5 517 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 TFIP11Q9UBB9 837 aaKnown RBP4.52□□□□□ -1.69
CDC40-204ENST00000431461 CCDC39Q9UFE4 941 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 PPME1Q9Y570 386 aa4.52□□□□□ -1.69
CDC40-204ENST00000431461 B8ZZF3 427 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 MICAL2O94851 1124 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 UBTFP17480 764 aaKnown RBP4.51□□□□□ -1.69
CDC40-204ENST00000431461 CD68P34810 354 aaPredicted RBP4.51□□□□□ -1.69
CDC40-204ENST00000431461 PTK7Q13308 1070 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 MSMPQ1L6U9 139 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 C11orf91Q3C1V1 193 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 LARP1Q6PKG0 1096 aaKnown RBP4.51□□□□□ -1.69
CDC40-204ENST00000431461 AGBL5Q8NDL9 886 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 TRIM33Q9UPN9 1127 aa4.51□□□□□ -1.69
CDC40-204ENST00000431461 LINC01387J3KSC0 135 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 OPLAHO14841 1288 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 PSAPP07602 524 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 FOSL1P15407 271 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 DPYDQ12882 1025 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 DGKZQ13574 1117 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 KANK4Q5T7N3 995 aaPredicted RBP4.5□□□□□ -1.69
CDC40-204ENST00000431461 ANKRD34AQ69YU3 496 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.5□□□□□ -1.69
CDC40-204ENST00000431461 BEND4Q6ZU67 534 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 KLHL23Q8NBE8 558 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 GALNT11Q8NCW6 608 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 MYO19Q96H55 970 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 CARD10Q9BWT7 1032 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 LACRTQ9GZZ8 138 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 KCNF1Q9H3M0 494 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 ATG3Q9NT62 314 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 LEMD3Q9Y2U8 911 aa4.5□□□□□ -1.69
CDC40-204ENST00000431461 MAFBQ9Y5Q3 323 aaPredicted RBP4.5□□□□□ -1.69
CDC40-204ENST00000431461 WDR64B1ANS9 1081 aa4.49□□□□□ -1.69
CDC40-204ENST00000431461 ZNF865P0CJ78 1059 aaPredicted RBP4.49□□□□□ -1.69
CDC40-204ENST00000431461 HOXA10P31260 410 aaPredicted RBP4.49□□□□□ -1.69
CDC40-204ENST00000431461 CRTC2Q53ET0 693 aaPredicted RBP4.49□□□□□ -1.69
CDC40-204ENST00000431461 LILRA6Q6PI73 481 aa4.49□□□□□ -1.69
CDC40-204ENST00000431461 CMTR1Q8N1G2 835 aaKnown RBP4.49□□□□□ -1.69
CDC40-204ENST00000431461 QTRT2Q9H974 415 aaKnown RBP4.49□□□□□ -1.69
CDC40-204ENST00000431461 KCNK4Q9NYG8 393 aa4.49□□□□□ -1.69
CDC40-204ENST00000431461 RTCBQ9Y3I0 505 aaKnown RBP4.49□□□□□ -1.69
CDC40-204ENST00000431461 FAM196BA6NMK8 535 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 BIN1O00499 593 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 SART1O43290 800 aaKnown RBP4.48□□□□□ -1.69
CDC40-204ENST00000431461 FOXO3O43524 673 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 WEE1P30291 646 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 KIAA1211Q6ZU35 1233 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 ANKMY2Q8IV38 441 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 TP53INP2Q8IXH6 220 aa4.48□□□□□ -1.69
CDC40-204ENST00000431461 RGL4Q8IZJ4 473 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms