RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 COL4A1P02462 1669 aa21.86■■□□□ 1.09
CTDSP1-203ENST00000431127 C6orf229H3BNL8 230 aa21.86■■□□□ 1.09
CTDSP1-203ENST00000431127 WASHC4Q2M389 1173 aa21.86■■□□□ 1.09
CTDSP1-203ENST00000431127 EPHA10Q5JZY3 1008 aa21.86■■□□□ 1.09
CTDSP1-203ENST00000431127 XDHP47989 1333 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 TRIM27P14373 513 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 EIF6P56537 245 aaKnown RBP21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 ZKSCAN2Q63HK3 967 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 INTS3Q68E01 1043 aaKnown RBP21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 TBC1D16Q8TBP0 767 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 POLLQ9UGP5 575 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 GGA1Q9UJY5 639 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 MINPP1Q9UNW1 487 aa21.85■■□□□ 1.09
CTDSP1-203ENST00000431127 VEGFAP15692 232 aaPredicted RBP21.84■■□□□ 1.09
CTDSP1-203ENST00000431127 KAZALD1Q96I82 304 aa21.84■■□□□ 1.09
CTDSP1-203ENST00000431127 ZNRF3Q9ULT6 936 aa21.84■■□□□ 1.09
CTDSP1-203ENST00000431127 DDNO94850 711 aaPredicted RBP21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 UFL1O94874 794 aa21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 UBTFL1P0CB47 393 aaPredicted RBP21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 ATP2B4P23634 1241 aa21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 RABL6Q3YEC7 729 aaPredicted RBP21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 TAF7LQ5H9L4 462 aa21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 ANKRD2Q9GZV1 360 aa21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.09
CTDSP1-203ENST00000431127 ZNF541Q9H0D2 1346 aa21.82■■□□□ 1.08
CTDSP1-203ENST00000431127 GPC2Q8N158 579 aa21.82■■□□□ 1.08
CTDSP1-203ENST00000431127 ZC3H12CQ9C0D7 883 aaKnown RBP21.82■■□□□ 1.08
CTDSP1-203ENST00000431127 DUOX1Q9NRD9 1551 aa21.82■■□□□ 1.08
CTDSP1-203ENST00000431127 L3MBTL3Q96JM7 780 aaPredicted RBP21.81■■□□□ 1.08
CTDSP1-203ENST00000431127 COL4A5P29400 1685 aa21.8■■□□□ 1.08
CTDSP1-203ENST00000431127 ANKRD44Q8N8A2 993 aa21.8■■□□□ 1.08
CTDSP1-203ENST00000431127 SMC1BQ8NDV3 1235 aa21.8■■□□□ 1.08
CTDSP1-203ENST00000431127 LEMD3Q9Y2U8 911 aa21.8■■□□□ 1.08
CTDSP1-203ENST00000431127 IQCA1LA6NCM1 817 aa21.79■■□□□ 1.08
CTDSP1-203ENST00000431127 RIMBP2O15034 1052 aa21.79■■□□□ 1.08
CTDSP1-203ENST00000431127 GNAI3P08754 354 aa21.79■■□□□ 1.08
CTDSP1-203ENST00000431127 LDHAL6AQ6ZMR3 332 aa21.79■■□□□ 1.08
CTDSP1-203ENST00000431127 CLUAP1Q96AJ1 413 aa21.79■■□□□ 1.08
CTDSP1-203ENST00000431127 LTBP1Q14766 1721 aa21.79■■□□□ 1.08
CTDSP1-203ENST00000431127 POTECB2RU33 542 aa21.78■■□□□ 1.08
CTDSP1-203ENST00000431127 G3V3G9 751 aa21.78■■□□□ 1.08
CTDSP1-203ENST00000431127 DCAF8Q5TAQ9 597 aa21.78■■□□□ 1.08
CTDSP1-203ENST00000431127 FTSJ3Q8IY81 847 aaKnown RBP21.78■■□□□ 1.08
CTDSP1-203ENST00000431127 GJA3Q9Y6H8 435 aa21.78■■□□□ 1.08
CTDSP1-203ENST00000431127 WDR90Q96KV7 1748 aa21.77■■□□□ 1.08
CTDSP1-203ENST00000431127 HTRA3P83110 453 aa21.77■■□□□ 1.08
CTDSP1-203ENST00000431127 CHRNDQ07001 517 aa21.77■■□□□ 1.08
CTDSP1-203ENST00000431127 TNIP1Q15025 636 aa21.77■■□□□ 1.08
CTDSP1-203ENST00000431127 CNNM1Q9NRU3 951 aa21.77■■□□□ 1.08
CTDSP1-203ENST00000431127 CXCL9Q07325 125 aa21.76■■□□□ 1.07
CTDSP1-203ENST00000431127 ZNF594Q96JF6 807 aaPredicted RBP21.76■■□□□ 1.07
CTDSP1-203ENST00000431127 GPR101Q96P66 508 aaPredicted RBP21.76■■□□□ 1.07
CTDSP1-203ENST00000431127 MEIS3Q99687 375 aa21.76■■□□□ 1.07
CTDSP1-203ENST00000431127 RCAN3Q9UKA8 241 aa21.76■■□□□ 1.07
CTDSP1-203ENST00000431127 KCNJ4P48050 445 aa21.75■■□□□ 1.07
CTDSP1-203ENST00000431127 CIAPIN1Q6FI81 312 aa21.75■■□□□ 1.07
CTDSP1-203ENST00000431127 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
CTDSP1-203ENST00000431127 DBNDD1Q9H9R9 158 aa21.75■■□□□ 1.07
CTDSP1-203ENST00000431127 TNNQ9UQP3 1299 aa21.75■■□□□ 1.07
CTDSP1-203ENST00000431127 ZNF804BA4D1E1 1349 aa21.75■■□□□ 1.07
CTDSP1-203ENST00000431127 MED23Q9ULK4 1368 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 ECE2O60344 883 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 MS4A1P11836 297 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 DOK7Q18PE1 504 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 TMEM57Q8N5G2 664 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 KLRG1Q96E93 195 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 LRRFIP2Q9Y608 721 aaKnown RBP21.74■■□□□ 1.07
CTDSP1-203ENST00000431127 SPEF2Q9C093 1822 aa21.73■■□□□ 1.07
CTDSP1-203ENST00000431127 YDJCA8MPS7 323 aa21.73■■□□□ 1.07
CTDSP1-203ENST00000431127 RAD17O75943 681 aa21.73■■□□□ 1.07
CTDSP1-203ENST00000431127 LMOD1P29536 600 aaPredicted RBP21.73■■□□□ 1.07
CTDSP1-203ENST00000431127 TAF1DQ9H5J8 278 aaPredicted RBP21.72■■□□□ 1.07
CTDSP1-203ENST00000431127 MROH5Q6ZUA9 1318 aa21.72■■□□□ 1.07
CTDSP1-203ENST00000431127 PODNQ7Z5L7 613 aa21.71■■□□□ 1.07
CTDSP1-203ENST00000431127 HELBQ8NG08 1087 aaPredicted RBP21.71■■□□□ 1.07
CTDSP1-203ENST00000431127 RIPOR2Q9Y4F9 1068 aa21.71■■□□□ 1.07
CTDSP1-203ENST00000431127 WTIPA6NIX2 430 aaPredicted RBP21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 TAF5LO75529 589 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 GNAI2P04899 355 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 EPHX2P34913 555 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 C15orf52Q6ZUT6 534 aaKnown RBP21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 PNMA8AQ86V59 439 aaPredicted RBP21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 ITPRIPQ8IWB1 547 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 JMYQ8N9B5 988 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 YTHDC1Q96MU7 727 aaKnown RBP21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 PUS3Q9BZE2 481 aaKnown RBP21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 COA1Q9GZY4 146 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 SCN4AP35499 1836 aa21.7■■□□□ 1.06
CTDSP1-203ENST00000431127 PLIN1O60240 522 aa21.69■■□□□ 1.06
CTDSP1-203ENST00000431127 SCNN1DP51172 638 aa21.69■■□□□ 1.06
CTDSP1-203ENST00000431127 FBXO3Q9UK99 471 aa21.69■■□□□ 1.06
CTDSP1-203ENST00000431127 PSMD14O00487 310 aa21.68■■□□□ 1.06
CTDSP1-203ENST00000431127 RLBP1P12271 317 aa21.68■■□□□ 1.06
CTDSP1-203ENST00000431127 RPS12P25398 132 aaKnown RBP21.68■■□□□ 1.06
CTDSP1-203ENST00000431127 RFX5P48382 616 aaPredicted RBP21.68■■□□□ 1.06
CTDSP1-203ENST00000431127 GMPSP49915 693 aaPredicted RBP21.68■■□□□ 1.06
CTDSP1-203ENST00000431127 GPRC5DQ9NZD1 345 aa21.68■■□□□ 1.06
CTDSP1-203ENST00000431127 PTPN12Q05209 780 aaKnown RBP21.67■■□□□ 1.06
CTDSP1-203ENST00000431127 MTX1Q13505 466 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms