RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 HOXB7P09629 217 aa28.85■■■□□ 2.21
PTPRA-207ENST00000431048 RPS8P62241 208 aaKnown RBP28.85■■■□□ 2.21
PTPRA-207ENST00000431048 DOK7Q18PE1 504 aa28.85■■■□□ 2.21
PTPRA-207ENST00000431048 DDX60Q8IY21 1712 aaKnown RBP28.85■■■□□ 2.21
PTPRA-207ENST00000431048 TRPA1O75762 1119 aa28.84■■■□□ 2.21
PTPRA-207ENST00000431048 KRT24Q2M2I5 525 aa28.84■■■□□ 2.21
PTPRA-207ENST00000431048 KIF4BQ2VIQ3 1234 aa28.84■■■□□ 2.21
PTPRA-207ENST00000431048 SULF1Q8IWU6 871 aa28.84■■■□□ 2.21
PTPRA-207ENST00000431048 CSRNP1Q96S65 589 aa28.84■■■□□ 2.21
PTPRA-207ENST00000431048 PODXL2Q9NZ53 605 aa28.84■■■□□ 2.21
PTPRA-207ENST00000431048 ZC3H12CQ9C0D7 883 aaKnown RBP28.83■■■□□ 2.21
PTPRA-207ENST00000431048 DBF4Q9UBU7 674 aaPredicted RBP28.83■■■□□ 2.21
PTPRA-207ENST00000431048 PDE4DIPQ5VU43 2346 aa28.83■■■□□ 2.21
PTPRA-207ENST00000431048 ATP5J2-PTCD1G3V325 749 aa28.81■■■□□ 2.2
PTPRA-207ENST00000431048 IRS4O14654 1257 aaPredicted RBP28.81■■■□□ 2.2
PTPRA-207ENST00000431048 HDGFL1Q5TGJ6 251 aa28.81■■■□□ 2.2
PTPRA-207ENST00000431048 ZNF428Q96B54 188 aa28.81■■■□□ 2.2
PTPRA-207ENST00000431048 GGA3Q9NZ52 723 aa28.81■■■□□ 2.2
PTPRA-207ENST00000431048 ZNF609O15014 1411 aa28.8■■■□□ 2.2
PTPRA-207ENST00000431048 ZNF280AP59817 542 aaPredicted RBP28.8■■■□□ 2.2
PTPRA-207ENST00000431048 HYPKQ9NX55 129 aa28.8■■■□□ 2.2
PTPRA-207ENST00000431048 AGBL3Q8NEM8 1001 aa28.79■■■□□ 2.2
PTPRA-207ENST00000431048 CDCA5Q96FF9 252 aa28.79■■■□□ 2.2
PTPRA-207ENST00000431048 FKBP1BP68106 108 aa28.78■■■□□ 2.2
PTPRA-207ENST00000431048 CTU1Q7Z7A3 348 aaKnown RBP28.78■■■□□ 2.2
PTPRA-207ENST00000431048 HSP90B1P14625 803 aaKnown RBP28.77■■■□□ 2.2
PTPRA-207ENST00000431048 RALBP1Q15311 655 aa28.77■■■□□ 2.2
PTPRA-207ENST00000431048 TRIM35Q9UPQ4 493 aa28.77■■■□□ 2.2
PTPRA-207ENST00000431048 COL4A1P02462 1669 aa28.77■■■□□ 2.2
PTPRA-207ENST00000431048 ASTN2O75129 1339 aaPredicted RBP28.76■■■□□ 2.19
PTPRA-207ENST00000431048 AKAP11Q9UKA4 1901 aa28.76■■■□□ 2.19
PTPRA-207ENST00000431048 G3V3G9 751 aa28.75■■■□□ 2.19
PTPRA-207ENST00000431048 SOX10P56693 466 aa28.75■■■□□ 2.19
PTPRA-207ENST00000431048 SCARF1Q14162 830 aa28.75■■■□□ 2.19
PTPRA-207ENST00000431048 RTL5Q5HYW3 569 aaPredicted RBP28.75■■■□□ 2.19
PTPRA-207ENST00000431048 DCAF8Q5TAQ9 597 aa28.75■■■□□ 2.19
PTPRA-207ENST00000431048 RSBN1LQ6PCB5 846 aaPredicted RBP28.75■■■□□ 2.19
PTPRA-207ENST00000431048 RASAL3Q86YV0 1011 aa28.75■■■□□ 2.19
PTPRA-207ENST00000431048 ZBTB38Q8NAP3 1195 aaPredicted RBP28.75■■■□□ 2.19
PTPRA-207ENST00000431048 GGA1Q9UJY5 639 aa28.75■■■□□ 2.19
PTPRA-207ENST00000431048 SCN9AQ15858 1988 aa28.74■■■□□ 2.19
PTPRA-207ENST00000431048 UFL1O94874 794 aa28.74■■■□□ 2.19
PTPRA-207ENST00000431048 NEUROD2Q15784 382 aa28.74■■■□□ 2.19
PTPRA-207ENST00000431048 LAS1LQ9Y4W2 734 aaKnown RBP28.74■■■□□ 2.19
PTPRA-207ENST00000431048 PITPNM2Q9BZ72 1349 aa28.73■■■□□ 2.19
PTPRA-207ENST00000431048 ANGEL2Q5VTE6 544 aaKnown RBP28.73■■■□□ 2.19
PTPRA-207ENST00000431048 GMLQ99445 158 aa28.73■■■□□ 2.19
PTPRA-207ENST00000431048 SEC31BQ9NQW1 1179 aa28.73■■■□□ 2.19
PTPRA-207ENST00000431048 ANKIB1Q9P2G1 1089 aa28.73■■■□□ 2.19
PTPRA-207ENST00000431048 PKN2Q16513 984 aaKnown RBP28.71■■■□□ 2.19
PTPRA-207ENST00000431048 DUSP27Q5VZP5 1158 aa28.7■■■□□ 2.18
PTPRA-207ENST00000431048 RUNDC1Q96C34 613 aa28.7■■■□□ 2.18
PTPRA-207ENST00000431048 USP17L8P0C7I0 530 aa28.69■■■□□ 2.18
PTPRA-207ENST00000431048 CCDC152Q4G0S7 254 aa28.69■■■□□ 2.18
PTPRA-207ENST00000431048 RIC3Q7Z5B4 369 aa28.69■■■□□ 2.18
PTPRA-207ENST00000431048 CCDC146Q8IYE0 955 aa28.69■■■□□ 2.18
PTPRA-207ENST00000431048 MYOZ2Q9NPC6 264 aa28.69■■■□□ 2.18
PTPRA-207ENST00000431048 PODNQ7Z5L7 613 aa28.68■■■□□ 2.18
PTPRA-207ENST00000431048 PDE8AO60658 829 aa28.67■■■□□ 2.18
PTPRA-207ENST00000431048 PCCAP05165 728 aaPredicted RBP28.67■■■□□ 2.18
PTPRA-207ENST00000431048 PRPF38BQ5VTL8 546 aaKnown RBP28.67■■■□□ 2.18
PTPRA-207ENST00000431048 CCDC191Q8NCU4 936 aa28.67■■■□□ 2.18
PTPRA-207ENST00000431048 HPS5Q9UPZ3 1129 aa28.67■■■□□ 2.18
PTPRA-207ENST00000431048 PAPPA2Q9BXP8 1791 aa28.67■■■□□ 2.18
PTPRA-207ENST00000431048 XDHP47989 1333 aa28.67■■■□□ 2.18
PTPRA-207ENST00000431048 USP17L3A6NCW0 530 aa28.66■■■□□ 2.18
PTPRA-207ENST00000431048 USP17L4A6NCW7 530 aa28.66■■■□□ 2.18
PTPRA-207ENST00000431048 GOLGA2Q08379 1002 aa28.66■■■□□ 2.18
PTPRA-207ENST00000431048 USP17L1Q7RTZ2 530 aa28.66■■■□□ 2.18
PTPRA-207ENST00000431048 ATP2B4P23634 1241 aa28.65■■■□□ 2.18
PTPRA-207ENST00000431048 NOM1Q5C9Z4 860 aaKnown RBP28.65■■■□□ 2.18
PTPRA-207ENST00000431048 TM4SF4P48230 202 aa28.64■■■□□ 2.18
PTPRA-207ENST00000431048 ANKRD18AQ8IVF6 992 aa28.63■■■□□ 2.17
PTPRA-207ENST00000431048 PSME4Q14997 1843 aa28.63■■■□□ 2.17
PTPRA-207ENST00000431048 UBE2Q2LH0YL09 131 aa28.62■■■□□ 2.17
PTPRA-207ENST00000431048 ZNF296Q8WUU4 475 aaPredicted RBP28.62■■■□□ 2.17
PTPRA-207ENST00000431048 MYD88Q99836 296 aa28.62■■■□□ 2.17
PTPRA-207ENST00000431048 PHAXQ9H814 394 aaKnown RBP28.62■■■□□ 2.17
PTPRA-207ENST00000431048 MBIPQ9NS73 344 aa28.62■■■□□ 2.17
PTPRA-207ENST00000431048 ZNF853P0CG23 659 aa28.61■■■□□ 2.17
PTPRA-207ENST00000431048 MOB2Q70IA6 237 aa28.61■■■□□ 2.17
PTPRA-207ENST00000431048 CWC25Q9NXE8 425 aaPredicted RBP28.61■■■□□ 2.17
PTPRA-207ENST00000431048 HDAC9Q9UKV0 1011 aa28.61■■■□□ 2.17
PTPRA-207ENST00000431048 MMP14P50281 582 aa28.6■■■□□ 2.17
PTPRA-207ENST00000431048 TBC1D8O95759 1140 aa28.59■■■□□ 2.17
PTPRA-207ENST00000431048 MYBBP1AQ9BQG0 1328 aaKnown RBP28.59■■■□□ 2.17
PTPRA-207ENST00000431048 NBPF9Q3BBW0 867 aa28.58■■■□□ 2.17
PTPRA-207ENST00000431048 METTL22Q9BUU2 404 aaPredicted RBP28.58■■■□□ 2.17
PTPRA-207ENST00000431048 CFHR5Q9BXR6 569 aa28.58■■■□□ 2.17
PTPRA-207ENST00000431048 GPR25O00155 361 aa28.57■■■□□ 2.16
PTPRA-207ENST00000431048 WDR43Q15061 677 aaKnown RBP eCLIP28.57■■■□□ 2.16
PTPRA-207ENST00000431048 CDC5LQ99459 802 aaKnown RBP28.57■■■□□ 2.16
PTPRA-207ENST00000431048 ADAMTS8Q9UP79 889 aa28.57■■■□□ 2.16
PTPRA-207ENST00000431048 DACT2Q5SW24 774 aa28.56■■■□□ 2.16
PTPRA-207ENST00000431048 OGFOD1Q8N543 542 aa28.56■■■□□ 2.16
PTPRA-207ENST00000431048 CCDC85AQ96PX6 553 aaPredicted RBP28.56■■■□□ 2.16
PTPRA-207ENST00000431048 BSDC1Q9NW68 430 aaPredicted RBP28.56■■■□□ 2.16
PTPRA-207ENST00000431048 MED23Q9ULK4 1368 aa28.56■■■□□ 2.16
PTPRA-207ENST00000431048 MYO3BQ8WXR4 1341 aa28.55■■■□□ 2.16
PTPRA-207ENST00000431048 NF2P35240 595 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms