RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 BCL2L13Q9BXK5 485 aa10.42□□□□□ -0.74
ECHDC1-207ENST00000430841 SLC4A5Q9BY07 1137 aa10.42□□□□□ -0.74
ECHDC1-207ENST00000430841 TSKSQ9UJT2 592 aa10.42□□□□□ -0.74
ECHDC1-207ENST00000430841 TCERG1O14776 1098 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 PPEF1O14829 653 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 GTPBP6O43824 516 aaPredicted RBP10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 CELF2O95319 508 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 PRKAR2BP31323 418 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 DGKZQ13574 1117 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 OLFM4Q6UX06 510 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 NGEFQ8N5V2 710 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 SUPT20HQ8NEM7 779 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 IL17REQ8NFR9 667 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 C7orf43Q8WVR3 580 aa10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 ADARB2Q9NS39 739 aaKnown RBP10.41□□□□□ -0.74
ECHDC1-207ENST00000430841 LAMB4A4D0S4 1761 aa10.4□□□□□ -0.74
ECHDC1-207ENST00000430841 USP16Q9Y5T5 823 aa10.4□□□□□ -0.74
ECHDC1-207ENST00000430841 TLL2Q9Y6L7 1015 aa10.4□□□□□ -0.74
ECHDC1-207ENST00000430841 TRAF5O00463 557 aa10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 AOC2O75106 756 aa10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 EPS15P42566 896 aa10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 BRPF1P55201 1214 aaPredicted RBP10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 MCOLN1Q9GZU1 580 aa10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 GPHNQ9NQX3 736 aaPredicted RBP10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 CEMIPQ8WUJ3 1361 aa10.39□□□□□ -0.75
ECHDC1-207ENST00000430841 KLRG2A4D1S0 409 aaPredicted RBP10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 NOGQ13253 232 aa10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 TNIP1Q15025 636 aa10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 PPP1R42Q7Z4L9 355 aa10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 NUTM1Q86Y26 1132 aa10.38□□□□□ -0.75
ECHDC1-207ENST00000430841 CDHR2Q9BYE9 1310 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 KCNQ3O43525 872 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 GPTP24298 496 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 SCNN1DP51172 638 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 LTBP1Q14766 1721 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 AOC3Q16853 763 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 MCM10Q7L590 875 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 OXER1Q8TDS5 423 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 GPRC5DQ9NZD1 345 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 ABCC12Q96J65 1359 aa10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 IBTKQ9P2D0 1353 aaPredicted RBP10.37□□□□□ -0.75
ECHDC1-207ENST00000430841 PDE4DIPQ5VU43 2346 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 KIF7Q2M1P5 1343 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 H7C1D1 291 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 RGS19P49795 217 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 CRY2Q49AN0 593 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 CIAPIN1Q6FI81 312 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 DPP8Q6V1X1 898 aaPredicted RBP10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 SAPCD2Q86UD0 394 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 CCER1Q8TC90 406 aaPredicted RBP10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 PNISRQ8TF01 805 aaKnown RBP10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 HHIPL1Q96JK4 782 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 NLRP3Q96P20 1036 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 CRAMP1Q96RY5 1269 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 VPS33BQ9H267 617 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 ZBTB3Q9H5J0 574 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 ZNRF3Q9ULT6 936 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 RRP7AQ9Y3A4 280 aaKnown RBP10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 NPC1L1Q9UHC9 1359 aa10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 COL3A1P02461 1466 aaPredicted RBP10.36□□□□□ -0.75
ECHDC1-207ENST00000430841 CASP8AP2Q9UKL3 1982 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 MAP3K15Q6ZN16 1313 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 RIC1Q4ADV7 1423 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 PRAMEF22A3QJZ6 481 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 ERVV-1B6SEH8 477 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 MYL6BP14649 208 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 GMPSP49915 693 aaPredicted RBP10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 HUNKP57058 714 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 FMR1Q06787 632 aaKnown RBP eCLIP10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 HLFQ16534 295 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 PARP10Q53GL7 1025 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 CDC37L1Q7L3B6 337 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 WNT2BQ93097 391 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 GLIS2Q9BZE0 524 aaPredicted RBP10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 NUP98P52948 1817 aa10.35□□□□□ -0.75
ECHDC1-207ENST00000430841 HTATSF1O43719 755 aaKnown RBP10.34□□□□□ -0.75
ECHDC1-207ENST00000430841 TAF7Q15545 349 aaPredicted RBP10.34□□□□□ -0.75
ECHDC1-207ENST00000430841 CST9Q5W186 159 aa10.34□□□□□ -0.75
ECHDC1-207ENST00000430841 C2orf69Q8N8R5 385 aa10.34□□□□□ -0.75
ECHDC1-207ENST00000430841 ZC3H15Q8WU90 426 aaKnown RBP10.34□□□□□ -0.75
ECHDC1-207ENST00000430841 RSPH6AQ9H0K4 717 aa10.34□□□□□ -0.75
ECHDC1-207ENST00000430841 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 RAD17O75943 681 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 HOXA10P31260 410 aaPredicted RBP10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 NBPF10Q6P3W6 841 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 DDX46Q7L014 1031 aaKnown RBP10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 MPNDQ8N594 471 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 NBPF15Q8N660 670 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 ZNF454Q8N9F8 522 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 PHACTR3Q96KR7 559 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 ATP6V0A2Q9Y487 856 aa10.33□□□□□ -0.76
ECHDC1-207ENST00000430841 FOSBP53539 338 aa10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 SOX10P56693 466 aa10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 CXCL9Q07325 125 aa10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 DCTN1Q14203 1278 aa10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
ECHDC1-207ENST00000430841 DCPSQ96C86 337 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms