RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 SETDB2Q96T68 719 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 JADE2Q9NQC1 790 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 BCCIPQ9P287 314 aaKnown RBP eCLIP14.59□□□□□ -0.07
LDB3-205ENST00000429277 ATP8B2P98198 1209 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 FBXO31Q5XUX0 539 aaPredicted RBP14.59□□□□□ -0.07
LDB3-205ENST00000429277 NAP1L4Q99733 375 aaKnown RBP14.59□□□□□ -0.07
LDB3-205ENST00000429277 RRAGBQ5VZM2 374 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 LRSAM1Q6UWE0 723 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 SRRTQ9BXP5 876 aaKnown RBP14.59□□□□□ -0.07
LDB3-205ENST00000429277 C6orf50Q9HD87 102 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 TRMT1Q9NXH9 659 aaKnown RBP14.59□□□□□ -0.07
LDB3-205ENST00000429277 SSX2IPQ9Y2D8 614 aa14.59□□□□□ -0.07
LDB3-205ENST00000429277 LIG1P18858 919 aa14.58□□□□□ -0.07
LDB3-205ENST00000429277 UBE4AQ14139 1066 aa14.58□□□□□ -0.07
LDB3-205ENST00000429277 NAA16Q6N069 864 aaPredicted RBP14.58□□□□□ -0.07
LDB3-205ENST00000429277 OGFOD1Q8N543 542 aa14.58□□□□□ -0.07
LDB3-205ENST00000429277 TMX3Q96JJ7 454 aa14.58□□□□□ -0.07
LDB3-205ENST00000429277 CCDC77Q9BR77 488 aa14.58□□□□□ -0.07
LDB3-205ENST00000429277 STMN4Q9H169 189 aaPredicted RBP14.58□□□□□ -0.07
LDB3-205ENST00000429277 UBASH3AP57075 661 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 IMPG2Q9BZV3 1241 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 SLC4A4Q9Y6R1 1079 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 HSF2BPO75031 334 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 DNA2P51530 1060 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 GNG11P61952 73 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 ZNF622Q969S3 477 aaKnown RBP eCLIP14.58□□□□□ -0.08
LDB3-205ENST00000429277 KDM5BQ9UGL1 1544 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 RAD50Q92878 1312 aa14.58□□□□□ -0.08
LDB3-205ENST00000429277 PDE1AP54750 535 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 CEP135Q66GS9 1140 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 MAATS1Q7Z4T9 603 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 FAM200AQ8TCP9 573 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 ASXL1Q8IXJ9 1541 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 CCDC144CPQ8IYA2 1237 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 ESYT1Q9BSJ8 1104 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 PUF60Q9UHX1 559 aaKnown RBP14.57□□□□□ -0.08
LDB3-205ENST00000429277 BICDL2A1A5D9 508 aa14.57□□□□□ -0.08
LDB3-205ENST00000429277 NSRP1Q9H0G5 558 aaKnown RBP14.57□□□□□ -0.08
LDB3-205ENST00000429277 RBM8AQ9Y5S9 174 aaKnown RBP14.57□□□□□ -0.08
LDB3-205ENST00000429277 RNF187Q5TA31 235 aaPredicted RBP14.56□□□□□ -0.08
LDB3-205ENST00000429277 LINS1Q8NG48 757 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 CEP63Q96MT8 703 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 KRT83P78385 493 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 XAGE3Q8WTP9 111 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 TRIM75PA6NK02 468 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 SPDYE4A6NLX3 237 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 ATP2A1O14983 1001 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 TACC1O75410 805 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 SDSP20132 328 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 PPP1R2P41236 205 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 SNX21Q969T3 373 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 SYNCQ9H7C4 482 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 TEX14Q8IWB6 1497 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 CTAGE15A4D2H0 777 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 DYNC1I1O14576 645 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 CTAGE8P0CG41 777 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 LMAN1P49257 510 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 CTAGE6Q86UF2 777 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 CTAGE4Q8IX94 777 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 MSANTD4Q8NCY6 345 aa14.56□□□□□ -0.08
LDB3-205ENST00000429277 UHRF1BP1LA0JNW5 1464 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 ATL3Q6DD88 541 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 SMARCC2Q8TAQ2 1214 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 CHPF2Q9P2E5 772 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 TUBBP07437 444 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 NCBP1Q09161 790 aaKnown RBP14.55□□□□□ -0.08
LDB3-205ENST00000429277 PPP1R14CQ8TAE6 165 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 C11orf95C9JLR9 678 aaPredicted RBP14.55□□□□□ -0.08
LDB3-205ENST00000429277 ANKRD2Q9GZV1 360 aa14.55□□□□□ -0.08
LDB3-205ENST00000429277 PHACTR2O75167 634 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 GNA11P29992 359 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 NAPAP54920 295 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 KRT79Q5XKE5 535 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 PAXIP1Q6ZW49 1069 aaPredicted RBP14.54□□□□□ -0.08
LDB3-205ENST00000429277 COPS6Q7L5N1 327 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 PANK2Q9BZ23 570 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 GDPD2Q9HCC8 539 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 DISP3Q9P2K9 1392 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 ZSCAN23Q3MJ62 389 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 BRAPQ7Z569 592 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 IQCGQ9H095 443 aaKnown RBP14.54□□□□□ -0.08
LDB3-205ENST00000429277 FLT4P35916 1363 aa14.54□□□□□ -0.08
LDB3-205ENST00000429277 TOM1O60784 492 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 LMBR1LQ6UX01 489 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 RRP36Q96EU6 259 aaKnown RBP14.53□□□□□ -0.08
LDB3-205ENST00000429277 DUOX2Q9NRD8 1548 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 POLR3AO14802 1390 aaPredicted RBP14.53□□□□□ -0.08
LDB3-205ENST00000429277 MAGEB6P1A0A0J9YX57 407 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 SLC9C2Q5TAH2 1124 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 HEATR3Q7Z4Q2 680 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 TTC14Q96N46 770 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 OPA1O60313 960 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 ASIC1P78348 528 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 TPTE2Q6XPS3 522 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 HS2ST1Q7LGA3 356 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 EYA3Q99504 573 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 PAG1Q9NWQ8 432 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
LDB3-205ENST00000429277 SPDYE3A6NKU9 549 aa14.53□□□□□ -0.08
LDB3-205ENST00000429277 KRT86O43790 486 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms