RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 OSBPL3Q9H4L5 887 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 STAP2Q9UGK3 403 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 DBNLQ9UJU6 430 aaKnown RBP10.93□□□□□ -0.66
SMC6-204ENST00000428868 RIPOR2Q9Y4F9 1068 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 FPGT-TNNI3KV9GXZ4 949 aa10.93□□□□□ -0.66
SMC6-204ENST00000428868 SNAP23O00161 211 aa10.92□□□□□ -0.66
SMC6-204ENST00000428868 SEC24BO95487 1268 aa10.92□□□□□ -0.66
SMC6-204ENST00000428868 MAP4K4O95819 1239 aaPredicted RBP10.92□□□□□ -0.66
SMC6-204ENST00000428868 MMP10P09238 476 aa10.92□□□□□ -0.66
SMC6-204ENST00000428868 ADORA1P30542 326 aa10.92□□□□□ -0.66
SMC6-204ENST00000428868 CLASRPQ8N2M8 674 aaKnown RBP10.92□□□□□ -0.66
SMC6-204ENST00000428868 VGLL2Q8N8G2 317 aa10.92□□□□□ -0.66
SMC6-204ENST00000428868 HELBQ8NG08 1087 aaPredicted RBP10.92□□□□□ -0.66
SMC6-204ENST00000428868 DBNDD2Q9BQY9 259 aa10.92□□□□□ -0.66
SMC6-204ENST00000428868 ZNF646O15015 1829 aaPredicted RBP10.91□□□□□ -0.66
SMC6-204ENST00000428868 NPHP1O15259 732 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 IFIT2P09913 472 aaKnown RBP10.91□□□□□ -0.66
SMC6-204ENST00000428868 SDSP20132 328 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 TIMM10P62072 90 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 BMP2KLQ5H9B9 411 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 LDHAL6AQ6ZMR3 332 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 NLRP3Q96P20 1036 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 CNNM1Q9NRU3 951 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 CCDC88AQ3V6T2 1871 aa10.91□□□□□ -0.66
SMC6-204ENST00000428868 AOX1Q06278 1338 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 A0A1B0GUL7 405 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 WTIPA6NIX2 430 aaPredicted RBP10.9□□□□□ -0.66
SMC6-204ENST00000428868 TAF5LO75529 589 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 HMGB2P26583 209 aaKnown RBP10.9□□□□□ -0.66
SMC6-204ENST00000428868 ST5P78524 1137 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 METTL24Q5JXM2 366 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 NLGN1Q8N2Q7 840 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 NDUFB9Q9Y6M9 179 aa10.9□□□□□ -0.66
SMC6-204ENST00000428868 GPR108Q9NPR9 543 aa10.89□□□□□ -0.67
SMC6-204ENST00000428868 CEP126Q9P2H0 1117 aa10.89□□□□□ -0.67
SMC6-204ENST00000428868 FBXO3Q9UK99 471 aa10.89□□□□□ -0.67
SMC6-204ENST00000428868 DUOX1Q9NRD9 1551 aa10.89□□□□□ -0.67
SMC6-204ENST00000428868 TTC41PQ6P2S7 1318 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 HSP90B1P14625 803 aaKnown RBP10.88□□□□□ -0.67
SMC6-204ENST00000428868 IGHMBP2P38935 993 aaKnown RBP10.88□□□□□ -0.67
SMC6-204ENST00000428868 CHRNDQ07001 517 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 ATP2B3Q16720 1220 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 CRY2Q49AN0 593 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 ANKRD18AQ8IVF6 992 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 EDC3Q96F86 508 aaKnown RBP10.88□□□□□ -0.67
SMC6-204ENST00000428868 NEUROD6Q96NK8 337 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 MPHOSPH8Q99549 860 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 ECHDC1Q9NTX5 307 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 PARP3Q9Y6F1 533 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 LAMA4Q16363 1823 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 MAST2Q6P0Q8 1798 aa10.88□□□□□ -0.67
SMC6-204ENST00000428868 C10orf71Q711Q0 1435 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 PDE8BO95263 885 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 FGFR2P21802 821 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 TBC1D9Q6ZT07 1266 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 XAGE2Q96GT9 111 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 CDC5LQ99459 802 aaKnown RBP10.87□□□□□ -0.67
SMC6-204ENST00000428868 BOLA2Q9H3K6 86 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 MINPP1Q9UNW1 487 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 CDK5RAP2Q96SN8 1893 aa10.87□□□□□ -0.67
SMC6-204ENST00000428868 MROH5Q6ZUA9 1318 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
SMC6-204ENST00000428868 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 TRIM6-TRIM34B2RNG4 842 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 KLRK1P26718 216 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 RPS8P62241 208 aaKnown RBP10.86□□□□□ -0.67
SMC6-204ENST00000428868 GRAPQ13588 217 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 SCARF1Q14162 830 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 DDX46Q7L014 1031 aaKnown RBP10.86□□□□□ -0.67
SMC6-204ENST00000428868 GRAPLQ8TC17 118 aaPredicted RBP10.86□□□□□ -0.67
SMC6-204ENST00000428868 RILPL2Q969X0 211 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 BSDC1Q9NW68 430 aaPredicted RBP10.86□□□□□ -0.67
SMC6-204ENST00000428868 COL1A1P02452 1464 aaPredicted RBP10.86□□□□□ -0.67
SMC6-204ENST00000428868 PSME4Q14997 1843 aa10.86□□□□□ -0.67
SMC6-204ENST00000428868 SCN9AQ15858 1988 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 CDC45O75419 566 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 GLRX3O76003 335 aaKnown RBP10.85□□□□□ -0.67
SMC6-204ENST00000428868 ZBTB7AO95365 584 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 CHGBP05060 677 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 PI16Q6UXB8 463 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 RPGRQ92834 1020 aaKnown RBP10.85□□□□□ -0.67
SMC6-204ENST00000428868 GPATCH3Q96I76 525 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 BRIP1Q9BX63 1249 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 IL25Q9H293 177 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 RBM19Q9Y4C8 960 aaKnown RBP10.85□□□□□ -0.67
SMC6-204ENST00000428868 ADAMTSL1Q8N6G6 1762 aa10.85□□□□□ -0.67
SMC6-204ENST00000428868 ERC2O15083 957 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 ATP5JP18859 108 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 HOXA10P31260 410 aaPredicted RBP10.84□□□□□ -0.67
SMC6-204ENST00000428868 PHKA1P46020 1223 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 PUM3Q15397 648 aaKnown RBP10.84□□□□□ -0.67
SMC6-204ENST00000428868 OLFM4Q6UX06 510 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 GPR101Q96P66 508 aaPredicted RBP10.84□□□□□ -0.67
SMC6-204ENST00000428868 DNAJC2Q99543 621 aaKnown RBP10.84□□□□□ -0.67
SMC6-204ENST00000428868 ATF5Q9Y2D1 282 aaPredicted RBP10.84□□□□□ -0.67
SMC6-204ENST00000428868 AKAP2Q9Y2D5 859 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 FER1L6Q2WGJ9 1857 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 MYH2Q9UKX2 1941 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 ARFGEF1Q9Y6D6 1849 aa10.84□□□□□ -0.67
SMC6-204ENST00000428868 IRS2Q9Y4H2 1338 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms