RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 CNOT7Q9UIV1 285 aaKnown RBP21.94■■□□□ 1.1
TRIM39-209ENST00000428728 IL16Q14005 1332 aa21.94■■□□□ 1.1
TRIM39-209ENST00000428728 FOXN1O15353 648 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 UFL1O94874 794 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 IGKV5-2P06315 115 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 NEXNQ0ZGT2 675 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 G2E3Q7L622 706 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 FANCIQ9NVI1 1328 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 ANKIB1Q9P2G1 1089 aa21.93■■□□□ 1.1
TRIM39-209ENST00000428728 RTL9Q8NET4 1388 aa21.92■■□□□ 1.1
TRIM39-209ENST00000428728 CWF19L2Q2TBE0 894 aaKnown RBP21.92■■□□□ 1.1
TRIM39-209ENST00000428728 AIDAQ96BJ3 306 aa21.92■■□□□ 1.1
TRIM39-209ENST00000428728 GLIS2Q9BZE0 524 aaPredicted RBP21.92■■□□□ 1.1
TRIM39-209ENST00000428728 WDR33Q9C0J8 1336 aaKnown RBP21.91■■□□□ 1.1
TRIM39-209ENST00000428728 H7C1D1 291 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 CAPN15O75808 1086 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 HIRAP54198 1017 aaPredicted RBP21.91■■□□□ 1.1
TRIM39-209ENST00000428728 CTSWP56202 376 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 GRM1Q13255 1194 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 CST9Q5W186 159 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 ANKRD18AQ8IVF6 992 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 KCNQ5Q9NR82 932 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 GGA1Q9UJY5 639 aa21.91■■□□□ 1.1
TRIM39-209ENST00000428728 SLC4A2P04920 1241 aa21.9■■□□□ 1.1
TRIM39-209ENST00000428728 ZC3H12CQ9C0D7 883 aaKnown RBP21.9■■□□□ 1.1
TRIM39-209ENST00000428728 PODXL2Q9NZ53 605 aa21.9■■□□□ 1.1
TRIM39-209ENST00000428728 ZNF646O15015 1829 aaPredicted RBP21.9■■□□□ 1.1
TRIM39-209ENST00000428728 NEURL1BA8MQ27 555 aa21.89■■□□□ 1.09
TRIM39-209ENST00000428728 G3V3G9 751 aa21.89■■□□□ 1.09
TRIM39-209ENST00000428728 DCAF8Q5TAQ9 597 aa21.89■■□□□ 1.09
TRIM39-209ENST00000428728 ZNF408Q9H9D4 720 aa21.89■■□□□ 1.09
TRIM39-209ENST00000428728 A0A1B0GUL6 1792 aa21.89■■□□□ 1.09
TRIM39-209ENST00000428728 XDHP47989 1333 aa21.88■■□□□ 1.09
TRIM39-209ENST00000428728 CELF2O95319 508 aaKnown RBP21.88■■□□□ 1.09
TRIM39-209ENST00000428728 FLIIQ13045 1269 aa21.88■■□□□ 1.09
TRIM39-209ENST00000428728 TBC1D10BQ4KMP7 808 aaPredicted RBP21.88■■□□□ 1.09
TRIM39-209ENST00000428728 SAMD7Q7Z3H4 446 aa21.88■■□□□ 1.09
TRIM39-209ENST00000428728 UBE3BQ7Z3V4 1068 aa21.88■■□□□ 1.09
TRIM39-209ENST00000428728 DPF2Q92785 391 aa21.88■■□□□ 1.09
TRIM39-209ENST00000428728 CAPNS2Q96L46 248 aa21.88■■□□□ 1.09
TRIM39-209ENST00000428728 CDC5LQ99459 802 aaKnown RBP21.88■■□□□ 1.09
TRIM39-209ENST00000428728 FKBP5Q13451 457 aaPredicted RBP21.87■■□□□ 1.09
TRIM39-209ENST00000428728 NCBP3Q53F19 620 aaKnown RBP21.87■■□□□ 1.09
TRIM39-209ENST00000428728 CYP4F22Q6NT55 531 aa21.87■■□□□ 1.09
TRIM39-209ENST00000428728 ZC3H15Q8WU90 426 aaKnown RBP21.87■■□□□ 1.09
TRIM39-209ENST00000428728 GREM2Q9H772 168 aa21.87■■□□□ 1.09
TRIM39-209ENST00000428728 WBP1LQ9NX94 342 aa21.87■■□□□ 1.09
TRIM39-209ENST00000428728 PGAP2Q9UHJ9 254 aa21.87■■□□□ 1.09
TRIM39-209ENST00000428728 TLL2Q9Y6L7 1015 aa21.87■■□□□ 1.09
TRIM39-209ENST00000428728 EGFRP00533 1210 aa21.86■■□□□ 1.09
TRIM39-209ENST00000428728 RPS12P25398 132 aaKnown RBP21.86■■□□□ 1.09
TRIM39-209ENST00000428728 CTCFP49711 727 aaPredicted RBP21.86■■□□□ 1.09
TRIM39-209ENST00000428728 TTLL11Q8NHH1 800 aa21.86■■□□□ 1.09
TRIM39-209ENST00000428728 ECE1P42892 770 aa21.85■■□□□ 1.09
TRIM39-209ENST00000428728 EXOSC9Q06265 439 aaKnown RBP21.85■■□□□ 1.09
TRIM39-209ENST00000428728 RBM26Q5T8P6 1007 aaKnown RBP21.85■■□□□ 1.09
TRIM39-209ENST00000428728 CDC37L1Q7L3B6 337 aa21.84■■□□□ 1.09
TRIM39-209ENST00000428728 USP48Q86UV5 1035 aa21.84■■□□□ 1.09
TRIM39-209ENST00000428728 WDR63Q8IWG1 891 aa21.84■■□□□ 1.09
TRIM39-209ENST00000428728 FAM9BQ8IZU0 186 aa21.84■■□□□ 1.09
TRIM39-209ENST00000428728 DNAAF4Q8WXU2 420 aa21.84■■□□□ 1.09
TRIM39-209ENST00000428728 H7C1W4 665 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 VAMP4O75379 141 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 VIL1P09327 827 aaKnown RBP21.82■■□□□ 1.08
TRIM39-209ENST00000428728 ATP2B4P23634 1241 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 LBX1P52954 281 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 MAP2K1Q02750 393 aaPredicted RBP21.82■■□□□ 1.08
TRIM39-209ENST00000428728 GCKRQ14397 625 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 KIF4BQ2VIQ3 1234 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 DLK2Q6UY11 383 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 SAPCD2Q86UD0 394 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 MYH16Q9H6N6 1097 aa21.82■■□□□ 1.08
TRIM39-209ENST00000428728 WTIPA6NIX2 430 aaPredicted RBP21.81■■□□□ 1.08
TRIM39-209ENST00000428728 FAM161AQ3B820 660 aa21.81■■□□□ 1.08
TRIM39-209ENST00000428728 KRT26Q7Z3Y9 468 aa21.81■■□□□ 1.08
TRIM39-209ENST00000428728 SPINK5Q9NQ38 1064 aaPredicted RBP21.81■■□□□ 1.08
TRIM39-209ENST00000428728 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
TRIM39-209ENST00000428728 ZNF609O15014 1411 aa21.8■■□□□ 1.08
TRIM39-209ENST00000428728 MED23Q9ULK4 1368 aa21.8■■□□□ 1.08
TRIM39-209ENST00000428728 ADM5C9JUS6 153 aa21.8■■□□□ 1.08
TRIM39-209ENST00000428728 AOC2O75106 756 aa21.8■■□□□ 1.08
TRIM39-209ENST00000428728 HSPA8P11142 646 aaKnown RBP21.8■■□□□ 1.08
TRIM39-209ENST00000428728 BSDC1Q9NW68 430 aaPredicted RBP21.8■■□□□ 1.08
TRIM39-209ENST00000428728 MINPP1Q9UNW1 487 aa21.8■■□□□ 1.08
TRIM39-209ENST00000428728 RSBN1LQ6PCB5 846 aaPredicted RBP21.79■■□□□ 1.08
TRIM39-209ENST00000428728 LINS1Q8NG48 757 aa21.79■■□□□ 1.08
TRIM39-209ENST00000428728 DCPSQ96C86 337 aaKnown RBP21.79■■□□□ 1.08
TRIM39-209ENST00000428728 GGA3Q9NZ52 723 aa21.79■■□□□ 1.08
TRIM39-209ENST00000428728 F6X3S4 739 aa21.78■■□□□ 1.08
TRIM39-209ENST00000428728 ITGA6P23229 1130 aa21.78■■□□□ 1.08
TRIM39-209ENST00000428728 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
TRIM39-209ENST00000428728 CCT4P50991 539 aaKnown RBP21.78■■□□□ 1.08
TRIM39-209ENST00000428728 CASP7P55210 303 aa21.78■■□□□ 1.08
TRIM39-209ENST00000428728 PLA2G12BQ9BX93 195 aa21.78■■□□□ 1.08
TRIM39-209ENST00000428728 ASTN2O75129 1339 aaPredicted RBP21.78■■□□□ 1.08
TRIM39-209ENST00000428728 AGBL3Q8NEM8 1001 aa21.77■■□□□ 1.08
TRIM39-209ENST00000428728 BEGAINQ9BUH8 593 aa21.77■■□□□ 1.08
TRIM39-209ENST00000428728 USP17L3A6NCW0 530 aa21.76■■□□□ 1.07
TRIM39-209ENST00000428728 USP17L4A6NCW7 530 aa21.76■■□□□ 1.07
TRIM39-209ENST00000428728 USP17L1Q7RTZ2 530 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms