RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 THRAP3Q9Y2W1 955 aaKnown RBP16.61■□□□□ 0.25
NCBP2-205ENST00000428425 RFX7Q2KHR2 1363 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 CDHR2Q9BYE9 1310 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 KCNQ2O43526 872 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 IFIT1P09914 478 aaKnown RBP16.61■□□□□ 0.25
NCBP2-205ENST00000428425 ITGA6P23229 1130 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 SCARF1Q14162 830 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 ME3Q16798 604 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 NGLY1Q96IV0 654 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 CDCA7Q9BWT1 371 aaPredicted RBP16.61■□□□□ 0.25
NCBP2-205ENST00000428425 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
NCBP2-205ENST00000428425 PALLDQ8WX93 1383 aa16.61■□□□□ 0.25
NCBP2-205ENST00000428425 IRS4O14654 1257 aaPredicted RBP16.6■□□□□ 0.25
NCBP2-205ENST00000428425 PTMSP20962 102 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 CTSWP56202 376 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 MCMDC2Q4G0Z9 681 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 TAF7LQ5H9L4 462 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 USPL1Q5W0Q7 1092 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 NECAB1Q8N987 351 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 XAGE2Q96GT9 111 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 C8orf37Q96NL8 207 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 MYH14Q7Z406 1995 aaKnown RBP16.6■□□□□ 0.25
NCBP2-205ENST00000428425 ATP6V1AP38606 617 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 CRKLP46109 303 aaKnown RBP16.6■□□□□ 0.25
NCBP2-205ENST00000428425 EIF5P55010 431 aaKnown RBP16.6■□□□□ 0.25
NCBP2-205ENST00000428425 PI16Q6UXB8 463 aa16.6■□□□□ 0.25
NCBP2-205ENST00000428425 NSFL1CQ9UNZ2 370 aaKnown RBP16.6■□□□□ 0.25
NCBP2-205ENST00000428425 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
NCBP2-205ENST00000428425 MYH3P11055 1940 aa16.59■□□□□ 0.25
NCBP2-205ENST00000428425 LOC102724428A0A0B4J2F2 783 aa16.58■□□□□ 0.25
NCBP2-205ENST00000428425 FAM177BA6PVY3 158 aa16.58■□□□□ 0.25
NCBP2-205ENST00000428425 SIK1P57059 783 aa16.58■□□□□ 0.25
NCBP2-205ENST00000428425 HSP90AB3PQ58FF7 597 aa16.58■□□□□ 0.25
NCBP2-205ENST00000428425 L1TD1Q5T7N2 865 aaKnown RBP16.58■□□□□ 0.25
NCBP2-205ENST00000428425 ZNF34Q8IZ26 560 aa16.58■□□□□ 0.25
NCBP2-205ENST00000428425 RIPOR2Q9Y4F9 1068 aa16.58■□□□□ 0.25
NCBP2-205ENST00000428425 SH3TC1Q8TE82 1336 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 ERVV-1B6SEH8 477 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 CYP21A2P08686 494 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 NCLP19338 710 aaKnown RBP16.58■□□□□ 0.24
NCBP2-205ENST00000428425 RXRBP28702 533 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 FKBP4Q02790 459 aaKnown RBP eCLIP16.58■□□□□ 0.24
NCBP2-205ENST00000428425 RNF20Q5VTR2 975 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 BLOC1S2Q6QNY1 142 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 QTRT2Q9H974 415 aaKnown RBP16.58■□□□□ 0.24
NCBP2-205ENST00000428425 CCDC87Q9NVE4 849 aa16.58■□□□□ 0.24
NCBP2-205ENST00000428425 NWD2Q9ULI1 1742 aa16.57■□□□□ 0.24
NCBP2-205ENST00000428425 RPS6KB1P23443 525 aa16.57■□□□□ 0.24
NCBP2-205ENST00000428425 TOB2Q14106 344 aaPredicted RBP16.57■□□□□ 0.24
NCBP2-205ENST00000428425 CAVIN1Q6NZI2 390 aaKnown RBP16.57■□□□□ 0.24
NCBP2-205ENST00000428425 LDHAL6AQ6ZMR3 332 aa16.57■□□□□ 0.24
NCBP2-205ENST00000428425 GDPD2Q9HCC8 539 aa16.57■□□□□ 0.24
NCBP2-205ENST00000428425 RBM27Q9P2N5 1060 aaKnown RBP16.57■□□□□ 0.24
NCBP2-205ENST00000428425 SYT1P21579 422 aa16.57■□□□□ 0.24
NCBP2-205ENST00000428425 FAM98CQ17RN3 349 aaKnown RBP16.57■□□□□ 0.24
NCBP2-205ENST00000428425 ZMYM1Q5SVZ6 1142 aa16.57■□□□□ 0.24
NCBP2-205ENST00000428425 MAST3O60307 1309 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 M0R2C6 588 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 HCLS1P14317 486 aaPredicted RBP16.56■□□□□ 0.24
NCBP2-205ENST00000428425 KCNQ4P56696 695 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 TSGA10IPQ3SY00 556 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 METTL24Q5JXM2 366 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 SUSD4Q5VX71 490 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 HMG20BQ9P0W2 317 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 SMC3Q9UQE7 1217 aa16.56■□□□□ 0.24
NCBP2-205ENST00000428425 PSMA5P28066 241 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 GJB2P29033 226 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 TTC39AQ5SRH9 613 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 GORABQ5T7V8 394 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 PTF1AQ7RTS3 328 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 GRPEL1Q9HAV7 217 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 USP21Q9UK80 565 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 ANKRD18BA2A2Z9 1011 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 RBM6P78332 1123 aaKnown RBP16.55■□□□□ 0.24
NCBP2-205ENST00000428425 ATP2B3Q16720 1220 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 VGLL2Q8N8G2 317 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 AKAP2Q9Y2D5 859 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
NCBP2-205ENST00000428425 TCHHQ07283 1943 aa16.55■□□□□ 0.24
NCBP2-205ENST00000428425 WDR33Q9C0J8 1336 aaKnown RBP16.55■□□□□ 0.24
NCBP2-205ENST00000428425 RNF113AO15541 343 aaKnown RBP16.54■□□□□ 0.24
NCBP2-205ENST00000428425 PDE8AO60658 829 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 ZAP70P43403 619 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 CCDC158Q5M9N0 1113 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 OSBP2Q969R2 916 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 RTN4Q9NQC3 1192 aaKnown RBP16.54■□□□□ 0.24
NCBP2-205ENST00000428425 TRPC5Q9UL62 973 aaPredicted RBP16.54■□□□□ 0.24
NCBP2-205ENST00000428425 U3KPZ7 1027 aaPredicted RBP16.54■□□□□ 0.24
NCBP2-205ENST00000428425 RREB1Q92766 1687 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 STX6O43752 255 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 ZSCAN31Q96LW9 406 aaPredicted RBP16.54■□□□□ 0.24
NCBP2-205ENST00000428425 SH2B1Q9NRF2 756 aaPredicted RBP16.54■□□□□ 0.24
NCBP2-205ENST00000428425 CNNM1Q9NRU3 951 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 HELLSQ9NRZ9 838 aa16.54■□□□□ 0.24
NCBP2-205ENST00000428425 SPEF2Q9C093 1822 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms