RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 XDHP47989 1333 aa26.16■■□□□ 1.78
HSPG2-205ENST00000427897 ITGA6P23229 1130 aa26.16■■□□□ 1.78
HSPG2-205ENST00000427897 ATP2B4P23634 1241 aa26.16■■□□□ 1.78
HSPG2-205ENST00000427897 EPS15P42566 896 aa26.16■■□□□ 1.78
HSPG2-205ENST00000427897 MIER1Q8N108 512 aa26.16■■□□□ 1.78
HSPG2-205ENST00000427897 MRPL50Q8N5N7 158 aaKnown RBP26.16■■□□□ 1.78
HSPG2-205ENST00000427897 GPR101Q96P66 508 aaPredicted RBP26.16■■□□□ 1.78
HSPG2-205ENST00000427897 BSDC1Q9NW68 430 aaPredicted RBP26.16■■□□□ 1.78
HSPG2-205ENST00000427897 COL4A1P02462 1669 aa26.15■■□□□ 1.78
HSPG2-205ENST00000427897 ECE2O60344 883 aa26.15■■□□□ 1.78
HSPG2-205ENST00000427897 ALDH1L1O75891 902 aa26.15■■□□□ 1.78
HSPG2-205ENST00000427897 SCNN1DP51172 638 aa26.15■■□□□ 1.78
HSPG2-205ENST00000427897 RTL9Q8NET4 1388 aa26.15■■□□□ 1.78
HSPG2-205ENST00000427897 ANKRD18BA2A2Z9 1011 aa26.14■■□□□ 1.78
HSPG2-205ENST00000427897 GRM8O00222 908 aa26.14■■□□□ 1.78
HSPG2-205ENST00000427897 GMPSP49915 693 aaPredicted RBP26.14■■□□□ 1.78
HSPG2-205ENST00000427897 CASP7P55210 303 aa26.14■■□□□ 1.78
HSPG2-205ENST00000427897 GPRC5DQ9NZD1 345 aa26.14■■□□□ 1.78
HSPG2-205ENST00000427897 DUOX1Q9NRD9 1551 aa26.14■■□□□ 1.78
HSPG2-205ENST00000427897 PTPRCP08575 1304 aa26.14■■□□□ 1.77
HSPG2-205ENST00000427897 FAM161AQ3B820 660 aa26.13■■□□□ 1.77
HSPG2-205ENST00000427897 USP50Q70EL3 339 aaPredicted RBP26.13■■□□□ 1.77
HSPG2-205ENST00000427897 SSH1Q8WYL5 1049 aa26.13■■□□□ 1.77
HSPG2-205ENST00000427897 ADARB2Q9NS39 739 aaKnown RBP26.13■■□□□ 1.77
HSPG2-205ENST00000427897 SMC4Q9NTJ3 1288 aa26.13■■□□□ 1.77
HSPG2-205ENST00000427897 MINPP1Q9UNW1 487 aa26.13■■□□□ 1.77
HSPG2-205ENST00000427897 SPEF2Q9C093 1822 aa26.12■■□□□ 1.77
HSPG2-205ENST00000427897 YDJCA8MPS7 323 aa26.12■■□□□ 1.77
HSPG2-205ENST00000427897 H7C1D1 291 aa26.12■■□□□ 1.77
HSPG2-205ENST00000427897 CSF1RP07333 972 aa26.12■■□□□ 1.77
HSPG2-205ENST00000427897 IFIT5Q13325 482 aaKnown RBP26.12■■□□□ 1.77
HSPG2-205ENST00000427897 ALDH1L2Q3SY69 923 aa26.12■■□□□ 1.77
HSPG2-205ENST00000427897 TAF7LQ5H9L4 462 aa26.12■■□□□ 1.77
HSPG2-205ENST00000427897 CNTROBQ8N137 903 aa26.11■■□□□ 1.77
HSPG2-205ENST00000427897 CCDC57Q2TAC2 916 aa26.1■■□□□ 1.77
HSPG2-205ENST00000427897 MAP1SQ66K74 1059 aaPredicted RBP26.1■■□□□ 1.77
HSPG2-205ENST00000427897 DNAJC5GQ8N7S2 189 aa26.1■■□□□ 1.77
HSPG2-205ENST00000427897 ANKRD2Q9GZV1 360 aa26.1■■□□□ 1.77
HSPG2-205ENST00000427897 CNOT7Q9UIV1 285 aaKnown RBP26.1■■□□□ 1.77
HSPG2-205ENST00000427897 PSMD14O00487 310 aa26.09■■□□□ 1.77
HSPG2-205ENST00000427897 CT47B1P0C2W7 299 aaPredicted RBP26.09■■□□□ 1.77
HSPG2-205ENST00000427897 KCNJ4P48050 445 aa26.09■■□□□ 1.77
HSPG2-205ENST00000427897 LMBR1LQ6UX01 489 aa26.09■■□□□ 1.77
HSPG2-205ENST00000427897 CCT4P50991 539 aaKnown RBP26.08■■□□□ 1.77
HSPG2-205ENST00000427897 FOXO4P98177 505 aa26.08■■□□□ 1.77
HSPG2-205ENST00000427897 TRMT2AQ8IZ69 625 aaKnown RBP26.08■■□□□ 1.77
HSPG2-205ENST00000427897 KLRG1Q96E93 195 aa26.08■■□□□ 1.77
HSPG2-205ENST00000427897 ZBTB12Q9Y330 459 aaPredicted RBP26.08■■□□□ 1.77
HSPG2-205ENST00000427897 LEMD3Q9Y2U8 911 aa26.07■■□□□ 1.76
HSPG2-205ENST00000427897 LTBP1Q14766 1721 aa26.06■■□□□ 1.76
HSPG2-205ENST00000427897 CREBZFQ9NS37 354 aa26.06■■□□□ 1.76
HSPG2-205ENST00000427897 ITGBL1O95965 494 aaPredicted RBP26.05■■□□□ 1.76
HSPG2-205ENST00000427897 RPS12P25398 132 aaKnown RBP26.05■■□□□ 1.76
HSPG2-205ENST00000427897 MICALL2Q8IY33 904 aa26.05■■□□□ 1.76
HSPG2-205ENST00000427897 DPF2Q92785 391 aa26.05■■□□□ 1.76
HSPG2-205ENST00000427897 KCNQ5Q9NR82 932 aa26.05■■□□□ 1.76
HSPG2-205ENST00000427897 HNRNPUQ00839 825 aaKnown RBP eCLIP26.04■■□□□ 1.76
HSPG2-205ENST00000427897 CEP350Q5VT06 3117 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 TMEM88BA6NKF7 163 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 CHRNDQ07001 517 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 PODNQ7Z5L7 613 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 FBXW7Q969H0 707 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 CNNM1Q9NRU3 951 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 ZNF804BA4D1E1 1349 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 PASKQ96RG2 1323 aa26.03■■□□□ 1.76
HSPG2-205ENST00000427897 EPHA10Q5JZY3 1008 aa26.02■■□□□ 1.76
HSPG2-205ENST00000427897 RBM26Q5T8P6 1007 aaKnown RBP26.02■■□□□ 1.76
HSPG2-205ENST00000427897 LDHAL6AQ6ZMR3 332 aa26.02■■□□□ 1.76
HSPG2-205ENST00000427897 MED23Q9ULK4 1368 aa26.02■■□□□ 1.76
HSPG2-205ENST00000427897 PLIN1O60240 522 aa26.01■■□□□ 1.75
HSPG2-205ENST00000427897 NBPF7P0C2Y1 421 aaPredicted RBP26.01■■□□□ 1.75
HSPG2-205ENST00000427897 ADAMTSL1Q8N6G6 1762 aa26.01■■□□□ 1.75
HSPG2-205ENST00000427897 SUCLG2Q96I99 432 aa26.01■■□□□ 1.75
HSPG2-205ENST00000427897 USP17L3A6NCW0 530 aa26■■□□□ 1.75
HSPG2-205ENST00000427897 USP17L4A6NCW7 530 aa26■■□□□ 1.75
HSPG2-205ENST00000427897 VIL1P09327 827 aaKnown RBP26■■□□□ 1.75
HSPG2-205ENST00000427897 USP17L1Q7RTZ2 530 aa26■■□□□ 1.75
HSPG2-205ENST00000427897 NOB1Q9ULX3 412 aaKnown RBP26■■□□□ 1.75
HSPG2-205ENST00000427897 WTIPA6NIX2 430 aaPredicted RBP25.99■■□□□ 1.75
HSPG2-205ENST00000427897 TBC1D10BQ4KMP7 808 aaPredicted RBP25.99■■□□□ 1.75
HSPG2-205ENST00000427897 HELBQ8NG08 1087 aaPredicted RBP25.99■■□□□ 1.75
HSPG2-205ENST00000427897 ZC3H15Q8WU90 426 aaKnown RBP25.99■■□□□ 1.75
HSPG2-205ENST00000427897 ZNF594Q96JF6 807 aaPredicted RBP25.99■■□□□ 1.75
HSPG2-205ENST00000427897 COA1Q9GZY4 146 aa25.99■■□□□ 1.75
HSPG2-205ENST00000427897 MKRN1Q9UHC7 482 aaKnown RBP25.99■■□□□ 1.75
HSPG2-205ENST00000427897 TAF5LO75529 589 aa25.98■■□□□ 1.75
HSPG2-205ENST00000427897 RSBN1LQ6PCB5 846 aaPredicted RBP25.98■■□□□ 1.75
HSPG2-205ENST00000427897 SAMD7Q7Z3H4 446 aa25.98■■□□□ 1.75
HSPG2-205ENST00000427897 API5Q9BZZ5 524 aaKnown RBP25.98■■□□□ 1.75
HSPG2-205ENST00000427897 ABT1Q9ULW3 272 aaKnown RBP25.98■■□□□ 1.75
HSPG2-205ENST00000427897 UTYO14607 1347 aa25.97■■□□□ 1.75
HSPG2-205ENST00000427897 SHTN1A0MZ66 631 aa25.97■■□□□ 1.75
HSPG2-205ENST00000427897 AGBL3Q8NEM8 1001 aa25.97■■□□□ 1.75
HSPG2-205ENST00000427897 TRPM4Q8TD43 1214 aa25.97■■□□□ 1.75
HSPG2-205ENST00000427897 BICC1Q9H694 974 aaKnown RBP25.96■■□□□ 1.75
HSPG2-205ENST00000427897 RARSP54136 660 aaKnown RBP25.95■■□□□ 1.74
HSPG2-205ENST00000427897 HIRAP54198 1017 aaPredicted RBP25.95■■□□□ 1.74
HSPG2-205ENST00000427897 CDC37L1Q7L3B6 337 aa25.95■■□□□ 1.74
HSPG2-205ENST00000427897 DCPSQ96C86 337 aaKnown RBP25.94■■□□□ 1.74
HSPG2-205ENST00000427897 KIF16BQ96L93 1317 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms