RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 DDNO94850 711 aaPredicted RBP11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 HSP90B1P14625 803 aaKnown RBP11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 GRIPAP1Q4V328 841 aa11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 DPP8Q6V1X1 898 aaPredicted RBP11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 LARGE2Q8N3Y3 721 aa11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 JDP2Q8WYK2 163 aa11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CELF1Q92879 486 aaKnown RBP11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CCDC85AQ96PX6 553 aaPredicted RBP11.77□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 FER1L6Q2WGJ9 1857 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 PPIP5K2O43314 1243 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 ECM2O94769 699 aaPredicted RBP11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 VEGFAP15692 232 aaPredicted RBP11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 DIEXFQ68CQ4 756 aaKnown RBP11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 UBE3BQ7Z3V4 1068 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SP8Q8IXZ3 490 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 NIM1KQ8IY84 436 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 PDCD7Q8N8D1 485 aaKnown RBP11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 RBM46Q8TBY0 533 aaKnown RBP11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 DNAAF4Q8WXU2 420 aa11.76□□□□□ -0.53
RFX3-AS1-202ENST00000427722 COL4A5P29400 1685 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 F6X3S4 739 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 PDE8AO60658 829 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 HSPA6P17066 643 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CTSWP56202 376 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 AOC3Q16853 763 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CCDC152Q4G0S7 254 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 TMC4Q7Z404 712 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 MPNDQ8N594 471 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CDHR2Q9BYE9 1310 aa11.75□□□□□ -0.53
RFX3-AS1-202ENST00000427722 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 FZD9O00144 591 aa11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 EIF6P56537 245 aaKnown RBP11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 GCKRQ14397 625 aa11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SUPT20HQ8NEM7 779 aa11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CDCA7LQ96GN5 454 aa11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 ZFP91Q96JP5 570 aaPredicted RBP11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 RTFDC1Q9BY42 306 aaPredicted RBP11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SBF1O95248 1867 aa11.74□□□□□ -0.53
RFX3-AS1-202ENST00000427722 IQCA1LA6NCM1 817 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 POTECB2RU33 542 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 COL4A1P02462 1669 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 RPS8P62241 208 aaKnown RBP11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SLFN5Q08AF3 891 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 DDX60Q8IY21 1712 aaKnown RBP11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SMC1BQ8NDV3 1235 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 LINS1Q8NG48 757 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 L3MBTL3Q96JM7 780 aaPredicted RBP11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 GJA3Q9Y6H8 435 aa11.73□□□□□ -0.53
RFX3-AS1-202ENST00000427722 H7C1W4 665 aa11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 GPSM2P81274 684 aa11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 FSTL1Q12841 308 aa11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 GREM2Q9H772 168 aa11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 NSFL1CQ9UNZ2 370 aaKnown RBP11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
RFX3-AS1-202ENST00000427722 DUOX1Q9NRD9 1551 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 C6orf229H3BNL8 230 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 KIAA2012Q0VF49 1180 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 FAM161AQ3B820 660 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 BEND3Q5T5X7 828 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 SLC4A10Q6U841 1118 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 ANKRD18AQ8IVF6 992 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 GPC2Q8N158 579 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 EFCAB3Q8N7B9 438 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 TTLL11Q8NHH1 800 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 CDC5LQ99459 802 aaKnown RBP11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 TAF1DQ9H5J8 278 aaPredicted RBP11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 HACL1Q9UJ83 578 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 TAOK2Q9UL54 1235 aa11.71□□□□□ -0.53
RFX3-AS1-202ENST00000427722 LAMB2P55268 1798 aa11.71□□□□□ -0.54
RFX3-AS1-202ENST00000427722 UFL1O94874 794 aa11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 CASP7P55210 303 aa11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 EAPPQ56P03 285 aaPredicted RBP11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 SSH1Q8WYL5 1049 aa11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 GPR101Q96P66 508 aaPredicted RBP11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 VPS33BQ9H267 617 aa11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 ZNRF3Q9ULT6 936 aa11.7□□□□□ -0.54
RFX3-AS1-202ENST00000427722 RTL9Q8NET4 1388 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 RAD17O75943 681 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 LMOD1P29536 600 aaPredicted RBP11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 EPHX2P34913 555 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 APLP1P51693 650 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 MRPL50Q8N5N7 158 aaKnown RBP11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 TBC1D16Q8TBP0 767 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 PLA2G12BQ9BX93 195 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 SMC4Q9NTJ3 1288 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 POLLQ9UGP5 575 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 GGA1Q9UJY5 639 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 LRRC37AA6NMS7 1700 aa11.69□□□□□ -0.54
RFX3-AS1-202ENST00000427722 GRM8O00222 908 aa11.68□□□□□ -0.54
RFX3-AS1-202ENST00000427722 SCNN1DP51172 638 aa11.68□□□□□ -0.54
RFX3-AS1-202ENST00000427722 CXCL9Q07325 125 aa11.68□□□□□ -0.54
RFX3-AS1-202ENST00000427722 LDHDQ86WU2 507 aa11.68□□□□□ -0.54
RFX3-AS1-202ENST00000427722 SLAIN1Q8ND83 568 aa11.68□□□□□ -0.54
RFX3-AS1-202ENST00000427722 EYA3Q99504 573 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms