RNA–Protein interactions for RNA: ENST00000427276.1

LINC01108-201, Transcript of long intergenic non-protein coding RNA 1108, humanhuman

TSL 2 BASIC

Gene LINC01108, Length 3,152 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01108-201ENST00000427276 TMED8Q6PL24 325 aaPredicted RBP8.75□□□□□ -1.01
LINC01108-201ENST00000427276 TMCO3Q6UWJ1 677 aa8.75□□□□□ -1.01
LINC01108-201ENST00000427276 MAP4K1Q92918 833 aa8.75□□□□□ -1.01
LINC01108-201ENST00000427276 TRIM34Q9BYJ4 488 aa8.75□□□□□ -1.01
LINC01108-201ENST00000427276 NAT10Q9H0A0 1025 aaKnown RBP8.75□□□□□ -1.01
LINC01108-201ENST00000427276 CDC42BPGQ6DT37 1551 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 RIC3Q7Z5B4 369 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 XPO4Q9C0E2 1151 aaKnown RBP8.74□□□□□ -1.01
LINC01108-201ENST00000427276 GOLPH3LQ9H4A5 285 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 ELP1O95163 1332 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 PRAMEF22A3QJZ6 481 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 SERPINC1P01008 464 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 PROSER3Q2NL68 480 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 TEX35Q5T0J7 233 aa8.74□□□□□ -1.01
LINC01108-201ENST00000427276 ZCCHC17Q9NP64 241 aaKnown RBP8.74□□□□□ -1.01
LINC01108-201ENST00000427276 ARGLU1Q9NWB6 273 aaPredicted RBP8.74□□□□□ -1.01
LINC01108-201ENST00000427276 HIP1O00291 1037 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 TPM4P67936 248 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 IQCB1Q15051 598 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 ERC1Q8IUD2 1116 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 RBM33Q96EV2 1170 aaKnown RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 BICC1Q9H694 974 aaKnown RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 SETD1BQ9UPS6 1966 aaKnown RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 TTC21AQ8NDW8 1320 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 NEMFO60524 1076 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 CLCN6P51797 869 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 CFAP100Q494V2 611 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 ZNF530Q6P9A1 599 aaPredicted RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 ZNF526Q8TF50 670 aaPredicted RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 SUCLG2Q96I99 432 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 CARD6Q9BX69 1037 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 MLH3Q9UHC1 1453 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 PTPDC1A2A3K4 754 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 EPB41L2O43491 1005 aaKnown RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 GYS2P54840 703 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 HNRNPH2P55795 449 aaKnown RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 CCZ1BP86790 482 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 CCZ1P86791 482 aaPredicted RBP8.73□□□□□ -1.01
LINC01108-201ENST00000427276 SCRN1Q12765 414 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 RESTQ13127 1097 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 CERS3Q8IU89 383 aa8.73□□□□□ -1.01
LINC01108-201ENST00000427276 SASH1O94885 1247 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 HSPA2P54652 639 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 DPCR1Q3MIW9 517 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 TTLL5Q6EMB2 1281 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 MRFAP1L1Q96HT8 127 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 ZNF396Q96N95 335 aaPredicted RBP8.72□□□□□ -1.01
LINC01108-201ENST00000427276 UTP14AQ9BVJ6 771 aaKnown RBP8.72□□□□□ -1.01
LINC01108-201ENST00000427276 MARCKSP29966 332 aaPredicted RBP8.72□□□□□ -1.01
LINC01108-201ENST00000427276 HDGFP51858 240 aaKnown RBP8.72□□□□□ -1.01
LINC01108-201ENST00000427276 HAND2P61296 217 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 SYCP1Q15431 976 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 PPP1R13BQ96KQ4 1090 aa8.72□□□□□ -1.01
LINC01108-201ENST00000427276 FER1L4A9Z1Z3 1794 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 CTAGE5O15320 804 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 GSDMDP57764 484 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 ZSCAN16Q9H4T2 348 aaPredicted RBP8.71□□□□□ -1.01
LINC01108-201ENST00000427276 GJB4Q9NTQ9 266 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 ZNF446Q9NWS9 450 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 FLT4P35916 1363 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 MAP3K5Q99683 1374 aa8.71□□□□□ -1.01
LINC01108-201ENST00000427276 SYNE3Q6ZMZ3 975 aa8.71□□□□□ -1.02
LINC01108-201ENST00000427276 CREBRFQ8IUR6 639 aa8.71□□□□□ -1.02
LINC01108-201ENST00000427276 DHX40Q8IX18 779 aaKnown RBP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 LRRC59Q96AG4 307 aaKnown RBP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 SLC3A2P08195 630 aaKnown RBP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 EIF4A1P60842 406 aaKnown RBP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 FAM160A1Q05DH4 1040 aa8.71□□□□□ -1.02
LINC01108-201ENST00000427276 E4F1Q66K89 784 aaPredicted RBP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.02
LINC01108-201ENST00000427276 MRPS27Q92552 414 aaKnown RBP8.71□□□□□ -1.02
LINC01108-201ENST00000427276 TMEM131LA2VDJ0 1609 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 GRM8O00222 908 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 CPLX1O14810 134 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 TAF5LO75529 589 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 CYP21A2P08686 494 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
LINC01108-201ENST00000427276 HOXC9P31274 260 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 NDUFA8P51970 172 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 KRT32Q14532 448 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 KRBA2Q6ZNG9 492 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 C10orf67Q8IYJ2 551 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
LINC01108-201ENST00000427276 CLTCQ00610 1675 aaKnown RBP8.7□□□□□ -1.02
LINC01108-201ENST00000427276 GOLIM4O00461 696 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 CAVIN2O95810 425 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 ATP1A3P13637 1013 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 LMAN1P49257 510 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 EVCP57679 992 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 GNG11P61952 73 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 NEXNQ0ZGT2 675 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 PCDHA7Q9UN72 937 aa8.7□□□□□ -1.02
LINC01108-201ENST00000427276 KIF2AO00139 706 aaPredicted RBP8.69□□□□□ -1.02
LINC01108-201ENST00000427276 UBASH3AP57075 661 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 SLC39A6Q13433 755 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 ARMCX5Q6P1M9 558 aa8.69□□□□□ -1.02
LINC01108-201ENST00000427276 MYD88Q99836 296 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms