RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PBXIP1Q96AQ6 731 aa10.1□□□□□ -0.79
C9orf3-205ENST00000427193 PLD4Q96BZ4 506 aa10.1□□□□□ -0.79
C9orf3-205ENST00000427193 MKNK1Q9BUB5 465 aa10.1□□□□□ -0.79
C9orf3-205ENST00000427193 RBSNQ9H1K0 784 aa10.1□□□□□ -0.79
C9orf3-205ENST00000427193 TNFRSF10BO14763 440 aa10.09□□□□□ -0.79
C9orf3-205ENST00000427193 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
C9orf3-205ENST00000427193 CCDC97Q96F63 343 aaPredicted RBP10.09□□□□□ -0.79
C9orf3-205ENST00000427193 THOC2Q8NI27 1593 aaKnown RBP10.09□□□□□ -0.79
C9orf3-205ENST00000427193 J3QW42 95 aa10.08□□□□□ -0.8
C9orf3-205ENST00000427193 TRIP4Q15650 581 aaPredicted RBP10.08□□□□□ -0.8
C9orf3-205ENST00000427193 IGF2-ASQ6U949 168 aa10.08□□□□□ -0.8
C9orf3-205ENST00000427193 NSUN5Q96P11 429 aaKnown RBP10.08□□□□□ -0.8
C9orf3-205ENST00000427193 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
C9orf3-205ENST00000427193 NAA30Q147X3 362 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-205ENST00000427193 FAM26DQ5JW98 314 aa10.07□□□□□ -0.8
C9orf3-205ENST00000427193 PRSS36Q5K4E3 855 aa10.07□□□□□ -0.8
C9orf3-205ENST00000427193 CAPN12Q6ZSI9 719 aa10.07□□□□□ -0.8
C9orf3-205ENST00000427193 SSBP4Q9BWG4 385 aaPredicted RBP10.07□□□□□ -0.8
C9orf3-205ENST00000427193 UBAP1LF5GYI3 381 aa10.06□□□□□ -0.8
C9orf3-205ENST00000427193 TP53INP1Q96A56 240 aa10.06□□□□□ -0.8
C9orf3-205ENST00000427193 STIM2Q9P246 746 aa10.06□□□□□ -0.8
C9orf3-205ENST00000427193 FNDC3AQ9Y2H6 1198 aaKnown RBP10.06□□□□□ -0.8
C9orf3-205ENST00000427193 DEAF1O75398 565 aaPredicted RBP10.05□□□□□ -0.8
C9orf3-205ENST00000427193 ZAP70P43403 619 aa10.05□□□□□ -0.8
C9orf3-205ENST00000427193 CACTIN-AS1Q8N1I8 211 aa10.05□□□□□ -0.8
C9orf3-205ENST00000427193 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
C9orf3-205ENST00000427193 WFDC12Q8WWY7 111 aa10.05□□□□□ -0.8
C9orf3-205ENST00000427193 SRA1Q9HD15 236 aaKnown RBP10.05□□□□□ -0.8
C9orf3-205ENST00000427193 DLL1O00548 723 aa10.04□□□□□ -0.8
C9orf3-205ENST00000427193 OR13H1Q8NG92 308 aa10.04□□□□□ -0.8
C9orf3-205ENST00000427193 DCAF11Q8TEB1 546 aa10.04□□□□□ -0.8
C9orf3-205ENST00000427193 FOXD4L6Q3SYB3 417 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-205ENST00000427193 GDF6Q6KF10 455 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-205ENST00000427193 FOXD4L3Q6VB84 417 aaPredicted RBP10.03□□□□□ -0.8
C9orf3-205ENST00000427193 MAP4K3Q8IVH8 894 aa10.03□□□□□ -0.8
C9orf3-205ENST00000427193 ATAD2BQ9ULI0 1458 aa10.03□□□□□ -0.8
C9orf3-205ENST00000427193 NOS3P29474 1203 aa10.02□□□□□ -0.81
C9orf3-205ENST00000427193 IREB2P48200 963 aaKnown RBP10.02□□□□□ -0.81
C9orf3-205ENST00000427193 IL22RA1Q8N6P7 574 aa10.02□□□□□ -0.81
C9orf3-205ENST00000427193 SCO2A0A1W2PP80 73 aa10.01□□□□□ -0.81
C9orf3-205ENST00000427193 ATP2B4P23634 1241 aa10.01□□□□□ -0.81
C9orf3-205ENST00000427193 GPR152Q8TDT2 470 aa10.01□□□□□ -0.81
C9orf3-205ENST00000427193 MUC3BQ9H195 1237 aa10.01□□□□□ -0.81
C9orf3-205ENST00000427193 HYAL2Q12891 473 aa10□□□□□ -0.81
C9orf3-205ENST00000427193 TTC39BQ5VTQ0 682 aaPredicted RBP10□□□□□ -0.81
C9orf3-205ENST00000427193 SPACA7Q96KW9 195 aa10□□□□□ -0.81
C9orf3-205ENST00000427193 MRPL18Q9H0U6 180 aaKnown RBP10□□□□□ -0.81
C9orf3-205ENST00000427193 SLAIN2Q9P270 581 aa10□□□□□ -0.81
C9orf3-205ENST00000427193 ZBTB39O15060 712 aa9.99□□□□□ -0.81
C9orf3-205ENST00000427193 TRIM33Q9UPN9 1127 aa9.99□□□□□ -0.81
C9orf3-205ENST00000427193 HMGXB3Q12766 1538 aa9.98□□□□□ -0.81
C9orf3-205ENST00000427193 SETDB1Q15047 1291 aa9.98□□□□□ -0.81
C9orf3-205ENST00000427193 TMEM130Q8N3G9 435 aa9.98□□□□□ -0.81
C9orf3-205ENST00000427193 MEGF10Q96KG7 1140 aa9.98□□□□□ -0.81
C9orf3-205ENST00000427193 AKTIPQ9H8T0 292 aa9.98□□□□□ -0.81
C9orf3-205ENST00000427193 ABI2Q9NYB9 513 aaPredicted RBP9.98□□□□□ -0.81
C9orf3-205ENST00000427193 SMARCA2P51531 1590 aa9.97□□□□□ -0.81
C9orf3-205ENST00000427193 COL13A1Q5TAT6 717 aaPredicted RBP9.97□□□□□ -0.81
C9orf3-205ENST00000427193 PDE12Q6L8Q7 609 aaKnown RBP9.97□□□□□ -0.81
C9orf3-205ENST00000427193 PPME1Q9Y570 386 aa9.97□□□□□ -0.81
C9orf3-205ENST00000427193 SMNDC1O75940 238 aaKnown RBP eCLIP9.96□□□□□ -0.82
C9orf3-205ENST00000427193 KIF4AO95239 1232 aa9.96□□□□□ -0.82
C9orf3-205ENST00000427193 SCNN1AP37088 669 aa9.96□□□□□ -0.82
C9orf3-205ENST00000427193 ARTNQ5T4W7 220 aa9.96□□□□□ -0.82
C9orf3-205ENST00000427193 SEPT3Q9UH03 358 aa9.96□□□□□ -0.82
C9orf3-205ENST00000427193 LAMC3Q9Y6N6 1575 aa9.96□□□□□ -0.82
C9orf3-205ENST00000427193 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
C9orf3-205ENST00000427193 DZIP1LQ8IYY4 767 aaKnown RBP9.95□□□□□ -0.82
C9orf3-205ENST00000427193 ZFP64Q9NPA5 681 aa9.95□□□□□ -0.82
C9orf3-205ENST00000427193 ARID3CA6NKF2 412 aa9.94□□□□□ -0.82
C9orf3-205ENST00000427193 F8W735 103 aaPredicted RBP9.94□□□□□ -0.82
C9orf3-205ENST00000427193 ATP11AP98196 1134 aa9.94□□□□□ -0.82
C9orf3-205ENST00000427193 CEP135Q66GS9 1140 aa9.94□□□□□ -0.82
C9orf3-205ENST00000427193 HELQQ8TDG4 1101 aa9.94□□□□□ -0.82
C9orf3-205ENST00000427193 NUDT16Q96DE0 195 aaKnown RBP9.94□□□□□ -0.82
C9orf3-205ENST00000427193 PDS5BQ9NTI5 1447 aa9.93□□□□□ -0.82
C9orf3-205ENST00000427193 PRR23CQ6ZRP0 262 aa9.93□□□□□ -0.82
C9orf3-205ENST00000427193 ELP3Q9H9T3 547 aa9.93□□□□□ -0.82
C9orf3-205ENST00000427193 CDC27P30260 824 aa9.92□□□□□ -0.82
C9orf3-205ENST00000427193 Q6ZS46 218 aa9.92□□□□□ -0.82
C9orf3-205ENST00000427193 ZNF438Q7Z4V0 828 aa9.92□□□□□ -0.82
C9orf3-205ENST00000427193 RASSF4Q9H2L5 321 aa9.92□□□□□ -0.82
C9orf3-205ENST00000427193 LINC01387J3KSC0 135 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 ALX3O95076 343 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 CYP2E1P05181 493 aaPredicted RBP9.91□□□□□ -0.82
C9orf3-205ENST00000427193 LRP8Q14114 963 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 XKR5Q6UX68 686 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 ATCAYQ86WG3 371 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 NCAPG2Q86XI2 1143 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 CEP120Q8N960 986 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 PBX4Q9BYU1 374 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 LACRTQ9GZZ8 138 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 TMEM63CQ9P1W3 806 aa9.91□□□□□ -0.82
C9orf3-205ENST00000427193 BAZ1AQ9NRL2 1556 aaPredicted RBP9.91□□□□□ -0.82
C9orf3-205ENST00000427193 PCSK2P16519 638 aa9.9□□□□□ -0.82
C9orf3-205ENST00000427193 PPP1R15AO75807 674 aaPredicted RBP9.89□□□□□ -0.83
C9orf3-205ENST00000427193 NOM1Q5C9Z4 860 aaKnown RBP9.89□□□□□ -0.83
C9orf3-205ENST00000427193 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.89□□□□□ -0.83
C9orf3-205ENST00000427193 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
C9orf3-205ENST00000427193 GALNT11Q8NCW6 608 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms