RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 RPS8P62241 208 aaKnown RBP19.12■□□□□ 0.65
PDAP1-202ENST00000426447 KRT24Q2M2I5 525 aa19.12■□□□□ 0.65
PDAP1-202ENST00000426447 TBC1D16Q8TBP0 767 aa19.12■□□□□ 0.65
PDAP1-202ENST00000426447 GGA3Q9NZ52 723 aa19.12■□□□□ 0.65
PDAP1-202ENST00000426447 RTL9Q8NET4 1388 aa19.11■□□□□ 0.65
PDAP1-202ENST00000426447 SLC10A3P09131 477 aa19.11■□□□□ 0.65
PDAP1-202ENST00000426447 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
PDAP1-202ENST00000426447 REM2Q8IYK8 340 aaPredicted RBP19.11■□□□□ 0.65
PDAP1-202ENST00000426447 ANKIB1Q9P2G1 1089 aa19.11■□□□□ 0.65
PDAP1-202ENST00000426447 LAMB2P55268 1798 aa19.11■□□□□ 0.65
PDAP1-202ENST00000426447 DUOX1Q9NRD9 1551 aa19.1■□□□□ 0.65
PDAP1-202ENST00000426447 IRS4O14654 1257 aaPredicted RBP19.1■□□□□ 0.65
PDAP1-202ENST00000426447 VIL1P09327 827 aaKnown RBP19.1■□□□□ 0.65
PDAP1-202ENST00000426447 CTU1Q7Z7A3 348 aaKnown RBP19.1■□□□□ 0.65
PDAP1-202ENST00000426447 CDCA5Q96FF9 252 aa19.1■□□□□ 0.65
PDAP1-202ENST00000426447 ISCA1Q9BUE6 129 aa19.1■□□□□ 0.65
PDAP1-202ENST00000426447 CHL1O00533 1208 aa19.09■□□□□ 0.65
PDAP1-202ENST00000426447 SCARF1Q14162 830 aa19.09■□□□□ 0.65
PDAP1-202ENST00000426447 DBF4Q9UBU7 674 aaPredicted RBP19.09■□□□□ 0.65
PDAP1-202ENST00000426447 ASTN2O75129 1339 aaPredicted RBP19.08■□□□□ 0.65
PDAP1-202ENST00000426447 TAF1P21675 1872 aa19.08■□□□□ 0.65
PDAP1-202ENST00000426447 UFL1O94874 794 aa19.08■□□□□ 0.64
PDAP1-202ENST00000426447 ANGEL2Q5VTE6 544 aaKnown RBP19.08■□□□□ 0.64
PDAP1-202ENST00000426447 HSP90B1P14625 803 aaKnown RBP19.07■□□□□ 0.64
PDAP1-202ENST00000426447 HYPKQ9NX55 129 aa19.07■□□□□ 0.64
PDAP1-202ENST00000426447 GGA1Q9UJY5 639 aa19.07■□□□□ 0.64
PDAP1-202ENST00000426447 HDAC9Q9UKV0 1011 aa19.07■□□□□ 0.64
PDAP1-202ENST00000426447 RSBN1LQ6PCB5 846 aaPredicted RBP19.06■□□□□ 0.64
PDAP1-202ENST00000426447 RIC3Q7Z5B4 369 aa19.06■□□□□ 0.64
PDAP1-202ENST00000426447 CCDC146Q8IYE0 955 aa19.06■□□□□ 0.64
PDAP1-202ENST00000426447 AGBL3Q8NEM8 1001 aa19.06■□□□□ 0.64
PDAP1-202ENST00000426447 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
PDAP1-202ENST00000426447 FKBP1BP68106 108 aa19.05■□□□□ 0.64
PDAP1-202ENST00000426447 TRIM28Q13263 835 aaKnown RBP19.05■□□□□ 0.64
PDAP1-202ENST00000426447 RASAL3Q86YV0 1011 aa19.05■□□□□ 0.64
PDAP1-202ENST00000426447 SEC31BQ9NQW1 1179 aa19.05■□□□□ 0.64
PDAP1-202ENST00000426447 LRRC37AA6NMS7 1700 aa19.04■□□□□ 0.64
PDAP1-202ENST00000426447 HOXB7P09629 217 aa19.04■□□□□ 0.64
PDAP1-202ENST00000426447 USP17L8P0C7I0 530 aa19.04■□□□□ 0.64
PDAP1-202ENST00000426447 ZNF280AP59817 542 aaPredicted RBP19.04■□□□□ 0.64
PDAP1-202ENST00000426447 ZBTB38Q8NAP3 1195 aaPredicted RBP19.04■□□□□ 0.64
PDAP1-202ENST00000426447 MYOZ2Q9NPC6 264 aa19.04■□□□□ 0.64
PDAP1-202ENST00000426447 PKN2Q16513 984 aaKnown RBP19.03■□□□□ 0.64
PDAP1-202ENST00000426447 CCDC152Q4G0S7 254 aa19.03■□□□□ 0.64
PDAP1-202ENST00000426447 HPS5Q9UPZ3 1129 aa19.03■□□□□ 0.64
PDAP1-202ENST00000426447 TBC1D8O95759 1140 aa19.02■□□□□ 0.64
PDAP1-202ENST00000426447 GOLGA2Q08379 1002 aa19.02■□□□□ 0.64
PDAP1-202ENST00000426447 TTLL12Q14166 644 aaPredicted RBP19.02■□□□□ 0.64
PDAP1-202ENST00000426447 PRPF38BQ5VTL8 546 aaKnown RBP19.02■□□□□ 0.64
PDAP1-202ENST00000426447 DUSP27Q5VZP5 1158 aa19.02■□□□□ 0.64
PDAP1-202ENST00000426447 POLR2AP24928 1970 aaKnown RBP19.02■□□□□ 0.64
PDAP1-202ENST00000426447 DDX60Q8IY21 1712 aaKnown RBP19.01■□□□□ 0.63
PDAP1-202ENST00000426447 UBE2Q2LH0YL09 131 aa19.01■□□□□ 0.63
PDAP1-202ENST00000426447 RALBP1Q15311 655 aa19.01■□□□□ 0.63
PDAP1-202ENST00000426447 MOB2Q70IA6 237 aa19.01■□□□□ 0.63
PDAP1-202ENST00000426447 CCDC85AQ96PX6 553 aaPredicted RBP19.01■□□□□ 0.63
PDAP1-202ENST00000426447 SCAF8Q9UPN6 1271 aaKnown RBP19.01■□□□□ 0.63
PDAP1-202ENST00000426447 USP17L3A6NCW0 530 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 USP17L4A6NCW7 530 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 USP17L1Q7RTZ2 530 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 ANKRD18AQ8IVF6 992 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 ZNF296Q8WUU4 475 aaPredicted RBP19■□□□□ 0.63
PDAP1-202ENST00000426447 RUNDC1Q96C34 613 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 MYD88Q99836 296 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 TRIM35Q9UPQ4 493 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 PITPNM2Q9BZ72 1349 aa19■□□□□ 0.63
PDAP1-202ENST00000426447 PDE8AO60658 829 aa18.99■□□□□ 0.63
PDAP1-202ENST00000426447 ATP2B4P23634 1241 aa18.99■□□□□ 0.63
PDAP1-202ENST00000426447 PRAMEF18Q5VWM3 479 aa18.99■□□□□ 0.63
PDAP1-202ENST00000426447 PODNQ7Z5L7 613 aa18.99■□□□□ 0.63
PDAP1-202ENST00000426447 JARID2Q92833 1246 aaPredicted RBP18.99■□□□□ 0.63
PDAP1-202ENST00000426447 AKAP11Q9UKA4 1901 aa18.99■□□□□ 0.63
PDAP1-202ENST00000426447 XDHP47989 1333 aa18.99■□□□□ 0.63
PDAP1-202ENST00000426447 NF2P35240 595 aa18.98■□□□□ 0.63
PDAP1-202ENST00000426447 WDR43Q15061 677 aaKnown RBP eCLIP18.98■□□□□ 0.63
PDAP1-202ENST00000426447 OGFOD1Q8N543 542 aa18.98■□□□□ 0.63
PDAP1-202ENST00000426447 GMLQ99445 158 aa18.98■□□□□ 0.63
PDAP1-202ENST00000426447 COL4A1P02462 1669 aa18.98■□□□□ 0.63
PDAP1-202ENST00000426447 PCCAP05165 728 aaPredicted RBP18.97■□□□□ 0.63
PDAP1-202ENST00000426447 MKRN3Q13064 507 aaKnown RBP18.97■□□□□ 0.63
PDAP1-202ENST00000426447 CCDC191Q8NCU4 936 aa18.97■□□□□ 0.63
PDAP1-202ENST00000426447 FBXW7Q969H0 707 aa18.97■□□□□ 0.63
PDAP1-202ENST00000426447 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
PDAP1-202ENST00000426447 TNRC18O15417 2968 aaPredicted RBP18.96■□□□□ 0.63
PDAP1-202ENST00000426447 TM4SF4P48230 202 aa18.96■□□□□ 0.63
PDAP1-202ENST00000426447 NBPF9Q3BBW0 867 aa18.96■□□□□ 0.63
PDAP1-202ENST00000426447 CWC25Q9NXE8 425 aaPredicted RBP18.96■□□□□ 0.63
PDAP1-202ENST00000426447 GPR25O00155 361 aa18.95■□□□□ 0.62
PDAP1-202ENST00000426447 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
PDAP1-202ENST00000426447 MBIPQ9NS73 344 aa18.95■□□□□ 0.62
PDAP1-202ENST00000426447 ZNF609O15014 1411 aa18.94■□□□□ 0.62
PDAP1-202ENST00000426447 SREBF2Q12772 1141 aa18.94■□□□□ 0.62
PDAP1-202ENST00000426447 CDC5LQ99459 802 aaKnown RBP18.94■□□□□ 0.62
PDAP1-202ENST00000426447 PAPPA2Q9BXP8 1791 aa18.93■□□□□ 0.62
PDAP1-202ENST00000426447 SCN9AQ15858 1988 aa18.93■□□□□ 0.62
PDAP1-202ENST00000426447 DDX58O95786 925 aaKnown RBP18.93■□□□□ 0.62
PDAP1-202ENST00000426447 PRKG1Q13976 671 aa18.93■□□□□ 0.62
PDAP1-202ENST00000426447 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
PDAP1-202ENST00000426447 ARMC9Q7Z3E5 817 aa18.93■□□□□ 0.62
PDAP1-202ENST00000426447 MXD3Q9BW11 206 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms