RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 IGKV5-2P06315 115 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 MMP10P09238 476 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 GPTP24298 496 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 BRPF1P55201 1214 aaPredicted RBP7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 FKBP5Q13451 457 aaPredicted RBP7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 KSR2Q6VAB6 950 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 GIGYF2Q6Y7W6 1299 aaKnown RBP7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 NPM2Q86SE8 214 aaKnown RBP7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 ZNF34Q8IZ26 560 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 SLC16A10Q8TF71 515 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 CHMP4AQ9BY43 222 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 MTFR1LQ9H019 292 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 IL21Q9HBE4 155 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 RCAN3Q9UKA8 241 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 MAP3K2Q9Y2U5 619 aa7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 ARIH1Q9Y4X5 557 aaPredicted RBP7.29□□□□□ -1.24
HERPUD2-204ENST00000426180 BCORQ6W2J9 1755 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 C3orf80F5H4A9 247 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 POLRMTO00411 1230 aaKnown RBP7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 PLIN1O60240 522 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 TCIRG1Q13488 830 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 SUSD4Q5VX71 490 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 CLEC4GQ6UXB4 293 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 SYNE4Q8N205 404 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 NLGN1Q8N2Q7 840 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 CCDC24Q8N4L8 307 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 JARID2Q92833 1246 aaPredicted RBP7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 FRAT1Q92837 279 aaPredicted RBP7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 MTRQ99707 1265 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 MYD88Q99836 296 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 ISCA1Q9BUE6 129 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 METTL22Q9BUU2 404 aaPredicted RBP7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 PRKD2Q9BZL6 878 aa7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 NIP7Q9Y221 180 aaKnown RBP eCLIP7.28□□□□□ -1.24
HERPUD2-204ENST00000426180 ATP10DQ9P241 1426 aa7.27□□□□□ -1.24
HERPUD2-204ENST00000426180 DDX58O95786 925 aaKnown RBP7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 SERPINB2P05120 415 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 CWF19L2Q2TBE0 894 aaKnown RBP7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 BEND3Q5T5X7 828 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 PPP1R18Q6NYC8 613 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 TRAF7Q6Q0C0 670 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 SLC4A10Q6U841 1118 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 NUDT18Q6ZVK8 323 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 NLRP10Q86W26 655 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 DNAAF4Q8WXU2 420 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 SETDB2Q96T68 719 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 SPON1Q9HCB6 807 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 PTPRCP08575 1304 aa7.27□□□□□ -1.25
HERPUD2-204ENST00000426180 CARMIL3Q8ND23 1372 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 RNF40O75150 1001 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 NTSR2O95665 410 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 RLBP1P12271 317 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 TRIM27P14373 513 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 OSBPP22059 807 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 ERFEQ4G0M1 354 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 C20orf194Q5TEA3 1177 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 PRR5LQ6MZQ0 368 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 NUTM1Q86Y26 1132 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 ARHGAP45Q92619 1136 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 CLUAP1Q96AJ1 413 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 ZNF652Q9Y2D9 606 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 PARP3Q9Y6F1 533 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 COL24A1Q17RW2 1714 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 ABCC4O15439 1325 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 KIF16BQ96L93 1317 aa7.26□□□□□ -1.25
HERPUD2-204ENST00000426180 ARFGEF2Q9Y6D5 1785 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 ABCC12Q96J65 1359 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 NEURL1BA8MQ27 555 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 POLD1P28340 1107 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 TRIM28Q13263 835 aaKnown RBP7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 HSP90AB3PQ58FF7 597 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 RTL5Q5HYW3 569 aaPredicted RBP7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 ZKSCAN2Q63HK3 967 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 ATF7IPQ6VMQ6 1270 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 NBPF5PQ86XG9 351 aaPredicted RBP7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 PANK1Q8TE04 598 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 ZNF516Q92618 1163 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 FAM89AQ96GI7 184 aa7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 API5Q9BZZ5 524 aaKnown RBP7.25□□□□□ -1.25
HERPUD2-204ENST00000426180 IPO8O15397 1037 aaKnown RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 HCLS1P14317 486 aaPredicted RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 APLP1P51693 650 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 CASP7P55210 303 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 NEXNQ0ZGT2 675 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 GCKRQ14397 625 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 PARP10Q53GL7 1025 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 TMEM57Q8N5G2 664 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 CNBD1Q8NA66 436 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 CCDC191Q8NCU4 936 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 LINS1Q8NG48 757 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 UTP14AQ9BVJ6 771 aaKnown RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 SRCIN1Q9C0H9 1055 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 CDHR5Q9HBB8 845 aa7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 CWC25Q9NXE8 425 aaPredicted RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 RBM27Q9P2N5 1060 aaKnown RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 TRMT112Q9UI30 125 aaKnown RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 V9GY48 417 aaPredicted RBP7.24□□□□□ -1.25
HERPUD2-204ENST00000426180 C10orf71Q711Q0 1435 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms