RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 NLRP3Q96P20 1036 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 PODXL2Q9NZ53 605 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 COL4A1P02462 1669 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 LRP5O75197 1615 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 SERPINB2P05120 415 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 STK32BQ9NY57 414 aa18.29■□□□□ 0.52
CALD1-206ENST00000424922 DDR1Q08345 913 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 DBNLQ9UJU6 430 aaKnown RBP18.28■□□□□ 0.52
CALD1-206ENST00000424922 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 PRR5LQ6MZQ0 368 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 NLGN1Q8N2Q7 840 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 NEUROD6Q96NK8 337 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 MPHOSPH8Q99549 860 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 GPR108Q9NPR9 543 aa18.28■□□□□ 0.52
CALD1-206ENST00000424922 RIC1Q4ADV7 1423 aa18.27■□□□□ 0.52
CALD1-206ENST00000424922 TRIM6-TRIM34B2RNG4 842 aa18.27■□□□□ 0.52
CALD1-206ENST00000424922 ERC2O15083 957 aa18.27■□□□□ 0.52
CALD1-206ENST00000424922 TIMM10P62072 90 aa18.27■□□□□ 0.52
CALD1-206ENST00000424922 DBNDD2Q9BQY9 259 aa18.27■□□□□ 0.52
CALD1-206ENST00000424922 POLRMTO00411 1230 aaKnown RBP18.26■□□□□ 0.51
CALD1-206ENST00000424922 GLRX3O76003 335 aaKnown RBP18.26■□□□□ 0.51
CALD1-206ENST00000424922 MAP4K4O95819 1239 aaPredicted RBP18.26■□□□□ 0.51
CALD1-206ENST00000424922 IGHMBP2P38935 993 aaKnown RBP18.26■□□□□ 0.51
CALD1-206ENST00000424922 RILPL2Q969X0 211 aa18.26■□□□□ 0.51
CALD1-206ENST00000424922 CDC5LQ99459 802 aaKnown RBP18.26■□□□□ 0.51
CALD1-206ENST00000424922 ANTXR1Q9H6X2 564 aa18.26■□□□□ 0.51
CALD1-206ENST00000424922 ZNF609O15014 1411 aa18.26■□□□□ 0.51
CALD1-206ENST00000424922 A0A1B0GUL7 405 aa18.26■□□□□ 0.51
CALD1-206ENST00000424922 CDC45O75419 566 aa18.26■□□□□ 0.51
CALD1-206ENST00000424922 TBC1D9Q6ZT07 1266 aa18.26■□□□□ 0.51
CALD1-206ENST00000424922 AKAP2Q9Y2D5 859 aa18.25■□□□□ 0.51
CALD1-206ENST00000424922 A0A1B0GUL6 1792 aa18.25■□□□□ 0.51
CALD1-206ENST00000424922 ST5P78524 1137 aa18.25■□□□□ 0.51
CALD1-206ENST00000424922 MSL1Q68DK7 614 aa18.25■□□□□ 0.51
CALD1-206ENST00000424922 CCDC125Q86Z20 511 aa18.25■□□□□ 0.51
CALD1-206ENST00000424922 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
CALD1-206ENST00000424922 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
CALD1-206ENST00000424922 VGLL2Q8N8G2 317 aa18.24■□□□□ 0.51
CALD1-206ENST00000424922 NRXN2Q9P2S2 1712 aa18.24■□□□□ 0.51
CALD1-206ENST00000424922 HELBQ8NG08 1087 aaPredicted RBP18.23■□□□□ 0.51
CALD1-206ENST00000424922 ANKRD31Q8N7Z5 1873 aa18.23■□□□□ 0.51
CALD1-206ENST00000424922 PDE8BO95263 885 aa18.23■□□□□ 0.51
CALD1-206ENST00000424922 CELF1Q92879 486 aaKnown RBP18.23■□□□□ 0.51
CALD1-206ENST00000424922 SNX21Q969T3 373 aa18.23■□□□□ 0.51
CALD1-206ENST00000424922 MMP10P09238 476 aa18.22■□□□□ 0.51
CALD1-206ENST00000424922 ATP2B3Q16720 1220 aa18.22■□□□□ 0.51
CALD1-206ENST00000424922 BOLA2Q9H3K6 86 aa18.22■□□□□ 0.51
CALD1-206ENST00000424922 DDX46Q7L014 1031 aaKnown RBP18.22■□□□□ 0.51
CALD1-206ENST00000424922 TAF5LO75529 589 aa18.21■□□□□ 0.51
CALD1-206ENST00000424922 ATP5JP18859 108 aa18.21■□□□□ 0.51
CALD1-206ENST00000424922 ADORA1P30542 326 aa18.21■□□□□ 0.51
CALD1-206ENST00000424922 CNTROBQ8N137 903 aa18.21■□□□□ 0.51
CALD1-206ENST00000424922 XAGE2Q96GT9 111 aa18.21■□□□□ 0.51
CALD1-206ENST00000424922 ARAP2Q8WZ64 1704 aa18.2■□□□□ 0.5
CALD1-206ENST00000424922 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
CALD1-206ENST00000424922 CASC1Q6TDU7 716 aa18.2■□□□□ 0.5
CALD1-206ENST00000424922 BSDC1Q9NW68 430 aaPredicted RBP18.2■□□□□ 0.5
CALD1-206ENST00000424922 PARP3Q9Y6F1 533 aa18.2■□□□□ 0.5
CALD1-206ENST00000424922 FRAT2O75474 233 aaPredicted RBP18.2■□□□□ 0.5
CALD1-206ENST00000424922 CHRNDQ07001 517 aa18.2■□□□□ 0.5
CALD1-206ENST00000424922 GORABQ5T7V8 394 aa18.2■□□□□ 0.5
CALD1-206ENST00000424922 PUM3Q15397 648 aaKnown RBP18.19■□□□□ 0.5
CALD1-206ENST00000424922 HSCBQ8IWL3 235 aa18.19■□□□□ 0.5
CALD1-206ENST00000424922 PDGFDQ9GZP0 370 aaPredicted RBP18.19■□□□□ 0.5
CALD1-206ENST00000424922 CRY2Q49AN0 593 aa18.18■□□□□ 0.5
CALD1-206ENST00000424922 RPGRQ92834 1020 aaKnown RBP18.18■□□□□ 0.5
CALD1-206ENST00000424922 SLKQ9H2G2 1235 aaPredicted RBP18.18■□□□□ 0.5
CALD1-206ENST00000424922 SNAP23O00161 211 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 FGFR2P21802 821 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 CHMLP26374 656 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 CCDC158Q5M9N0 1113 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 LPIN2Q92539 896 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 EVI5LQ96CN4 794 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 MINPP1Q9UNW1 487 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 NDUFB9Q9Y6M9 179 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 AKAP11Q9UKA4 1901 aa18.17■□□□□ 0.5
CALD1-206ENST00000424922 DNAJC2Q99543 621 aaKnown RBP18.17■□□□□ 0.5
CALD1-206ENST00000424922 GSE1Q14687 1217 aa18.16■□□□□ 0.5
CALD1-206ENST00000424922 TTC39AQ5SRH9 613 aa18.16■□□□□ 0.5
CALD1-206ENST00000424922 EDC3Q96F86 508 aaKnown RBP18.16■□□□□ 0.5
CALD1-206ENST00000424922 HAUS7Q99871 368 aa18.16■□□□□ 0.5
CALD1-206ENST00000424922 SLC5A1P13866 664 aa18.16■□□□□ 0.5
CALD1-206ENST00000424922 GRAPQ13588 217 aa18.16■□□□□ 0.5
CALD1-206ENST00000424922 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
CALD1-206ENST00000424922 BRIP1Q9BX63 1249 aa18.16■□□□□ 0.5
CALD1-206ENST00000424922 IFIT1P09914 478 aaKnown RBP18.15■□□□□ 0.5
CALD1-206ENST00000424922 RBM17Q96I25 401 aaKnown RBP18.15■□□□□ 0.5
CALD1-206ENST00000424922 KIF2CQ99661 725 aa18.15■□□□□ 0.5
CALD1-206ENST00000424922 CHMP5Q9NZZ3 219 aa18.15■□□□□ 0.5
CALD1-206ENST00000424922 KLRG2A4D1S0 409 aaPredicted RBP18.14■□□□□ 0.5
CALD1-206ENST00000424922 CACNA1SQ13698 1873 aa18.14■□□□□ 0.5
CALD1-206ENST00000424922 COL11A2P13942 1736 aaPredicted RBP18.13■□□□□ 0.49
CALD1-206ENST00000424922 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.13■□□□□ 0.49
CALD1-206ENST00000424922 FSD1Q9BTV5 496 aa18.13■□□□□ 0.49
CALD1-206ENST00000424922 MYO5AQ9Y4I1 1855 aaKnown RBP18.13■□□□□ 0.49
CALD1-206ENST00000424922 WTIPA6NIX2 430 aaPredicted RBP18.13■□□□□ 0.49
CALD1-206ENST00000424922 CCDC102BQ68D86 513 aa18.13■□□□□ 0.49
CALD1-206ENST00000424922 ESYT1Q9BSJ8 1104 aa18.13■□□□□ 0.49
CALD1-206ENST00000424922 MYH7P12883 1935 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms