RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 TTC5Q8N0Z6 440 aa10.1□□□□□ -0.79
VPS8-204ENST00000424463 KLHL23Q8NBE8 558 aa10.1□□□□□ -0.79
VPS8-204ENST00000424463 PANK2Q9BZ23 570 aa10.1□□□□□ -0.79
VPS8-204ENST00000424463 DDX49Q9Y6V7 483 aaKnown RBP10.1□□□□□ -0.79
VPS8-204ENST00000424463 COL5A2P05997 1499 aaPredicted RBP10.1□□□□□ -0.79
VPS8-204ENST00000424463 IL2RBP14784 551 aa10.1□□□□□ -0.79
VPS8-204ENST00000424463 NPM3O75607 178 aaKnown RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 HSP90AB1P08238 724 aaKnown RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 SNRPA1P09661 255 aaKnown RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 SDSP20132 328 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 GSCP56915 257 aaPredicted RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 MAP9Q49MG5 647 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 COPS6Q7L5N1 327 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 DZIP3Q86Y13 1208 aaKnown RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 SSH3Q8TE77 659 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 XAGE3Q8WTP9 111 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 TEX13AQ9BXU3 409 aaPredicted RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 LRRCC1Q9C099 1032 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 BTG4Q9NY30 223 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 ADAMTS7Q9UKP4 1686 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 PXDNLA1KZ92 1463 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 SIPA1L3O60292 1781 aaPredicted RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 KAT6BQ8WYB5 2073 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 TNNT1P13805 278 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 GABPB1Q06547 395 aaPredicted RBP10.09□□□□□ -0.79
VPS8-204ENST00000424463 IL1RAPL2Q9NP60 686 aa10.09□□□□□ -0.79
VPS8-204ENST00000424463 CDC45O75419 566 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 SURF6O75683 361 aaKnown RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 PDE1AP54750 535 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 WDR78Q5VTH9 848 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 RIC3Q7Z5B4 369 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 ZNF396Q96N95 335 aaPredicted RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 FMNL2Q96PY5 1086 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 CWC25Q9NXE8 425 aaPredicted RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 C9orf78Q9NZ63 289 aaPredicted RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 RSPH14Q9UHP6 348 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 ABCC6O95255 1503 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 PCDH11XQ9BZA7 1347 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 PCDH11YQ9BZA8 1340 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 CACNA1FO60840 1977 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 PES1O00541 588 aaKnown RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 TNNT3P45378 269 aaPredicted RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 POLA2Q14181 598 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 FAM184AQ8NB25 1140 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 SPRYD3Q8NCJ5 442 aa10.08□□□□□ -0.8
VPS8-204ENST00000424463 MAGEC2Q9UBF1 373 aaPredicted RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 IBTKQ9P2D0 1353 aaPredicted RBP10.08□□□□□ -0.8
VPS8-204ENST00000424463 SCN11AQ9UI33 1791 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 ANKRD18BA2A2Z9 1011 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 PTCD1O75127 700 aaKnown RBP10.07□□□□□ -0.8
VPS8-204ENST00000424463 ALDH1L1O75891 902 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 IGKV5-2P06315 115 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 APLP1P51693 650 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 NAP1L1P55209 391 aaKnown RBP10.07□□□□□ -0.8
VPS8-204ENST00000424463 ZNF662Q6ZS27 426 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 LRP10Q7Z4F1 713 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 JARID2Q92833 1246 aaPredicted RBP10.07□□□□□ -0.8
VPS8-204ENST00000424463 ECEL1O95672 775 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
VPS8-204ENST00000424463 SF3B2Q13435 895 aaKnown RBP10.07□□□□□ -0.8
VPS8-204ENST00000424463 BECN1Q14457 450 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 ZSCAN26Q16670 478 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 LINS1Q8NG48 757 aa10.07□□□□□ -0.8
VPS8-204ENST00000424463 LARP6Q9BRS8 491 aaKnown RBP10.07□□□□□ -0.8
VPS8-204ENST00000424463 CAND2O75155 1236 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 PUF60Q9UHX1 559 aaKnown RBP10.06□□□□□ -0.8
VPS8-204ENST00000424463 SALL3Q9BXA9 1300 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 ANKRD62A6NC57 917 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 UNCXA6NJT0 531 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 ERVV-2B6SEH9 535 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 CREB3O43889 395 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 RAB11FIP3O75154 756 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 CAPN15O75808 1086 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 TRDNQ13061 729 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 NKX1-1Q15270 411 aaPredicted RBP10.06□□□□□ -0.8
VPS8-204ENST00000424463 ANKRD13DQ6ZTN6 518 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 FAM212AQ96EL1 285 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 KAZALD1Q96I82 304 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 SUCLG2Q96I99 432 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 MYD88Q99836 296 aa10.06□□□□□ -0.8
VPS8-204ENST00000424463 NBPF26B4DH59 902 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 GRM8O00222 908 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 SLFN14P0C7P3 912 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 MX1P20591 662 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 IFT88Q13099 833 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 NBPF14Q5TI25 921 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 NBPF15Q8N660 670 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 TBC1D22AQ8WUA7 517 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 KIF2CQ99661 725 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 SLKQ9H2G2 1235 aaPredicted RBP10.05□□□□□ -0.8
VPS8-204ENST00000424463 OSBPL3Q9H4L5 887 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 PA2G4Q9UQ80 394 aaKnown RBP10.05□□□□□ -0.8
VPS8-204ENST00000424463 R3HCC1Q9Y3T6 440 aaKnown RBP10.05□□□□□ -0.8
VPS8-204ENST00000424463 PKD1L3Q7Z443 1732 aa10.05□□□□□ -0.8
VPS8-204ENST00000424463 ATP5J2-PTCD1G3V325 749 aa10.04□□□□□ -0.8
VPS8-204ENST00000424463 H0YHG0 523 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms