RNA–Protein interactions for RNA: ENST00000423966.5

AFF3-206, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-206ENST00000423966 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
AFF3-206ENST00000423966 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
AFF3-206ENST00000423966 LRRCC1Q9C099 1032 aa11.74□□□□□ -0.53
AFF3-206ENST00000423966 NOP58Q9Y2X3 529 aaKnown RBP11.74□□□□□ -0.53
AFF3-206ENST00000423966 ANKRD18BA2A2Z9 1011 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 CSF1RP07333 972 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 ST5P78524 1137 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 NFIXQ14938 502 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 SLC10A5Q5PT55 438 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 DDX60Q8IY21 1712 aaKnown RBP11.73□□□□□ -0.53
AFF3-206ENST00000423966 CNBD1Q8NA66 436 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 KIF1BPQ96EK5 621 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 COPRSQ9NQ92 184 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 FBXO3Q9UK99 471 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
AFF3-206ENST00000423966 PNPLA7Q6ZV29 1317 aa11.72□□□□□ -0.53
AFF3-206ENST00000423966 APBB1O00213 710 aa11.72□□□□□ -0.53
AFF3-206ENST00000423966 HCLS1P14317 486 aaPredicted RBP11.72□□□□□ -0.53
AFF3-206ENST00000423966 NLRP3Q96P20 1036 aa11.72□□□□□ -0.53
AFF3-206ENST00000423966 PARP3Q9Y6F1 533 aa11.72□□□□□ -0.53
AFF3-206ENST00000423966 RTL9Q8NET4 1388 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 TM4SF1P30408 202 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 ERFEQ4G0M1 354 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 PLCD3Q8N3E9 789 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 TTLL11Q8NHH1 800 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 SLC16A10Q8TF71 515 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 HS3ST6Q96QI5 342 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 LNPKQ9C0E8 428 aa11.71□□□□□ -0.53
AFF3-206ENST00000423966 RIC1Q4ADV7 1423 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 CASZ1Q86V15 1759 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 CIAO1O76071 339 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 SERPINB2P05120 415 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 ITGA6P23229 1130 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 IL15P40933 162 aaPredicted RBP11.7□□□□□ -0.54
AFF3-206ENST00000423966 RFX5P48382 616 aaPredicted RBP11.7□□□□□ -0.54
AFF3-206ENST00000423966 RGS3P49796 1198 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 PTPN12Q05209 780 aaKnown RBP11.7□□□□□ -0.54
AFF3-206ENST00000423966 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 SYNE4Q8N205 404 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 CLASRPQ8N2M8 674 aaKnown RBP11.7□□□□□ -0.54
AFF3-206ENST00000423966 RHPN1Q8TCX5 695 aa11.7□□□□□ -0.54
AFF3-206ENST00000423966 UPF1Q92900 1129 aaKnown RBP eCLIP11.7□□□□□ -0.54
AFF3-206ENST00000423966 CDC5LQ99459 802 aaKnown RBP11.7□□□□□ -0.54
AFF3-206ENST00000423966 ANO8Q9HCE9 1232 aaPredicted RBP11.7□□□□□ -0.54
AFF3-206ENST00000423966 EYA2O00167 538 aa11.69□□□□□ -0.54
AFF3-206ENST00000423966 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
AFF3-206ENST00000423966 SF3B3Q15393 1217 aaKnown RBP11.69□□□□□ -0.54
AFF3-206ENST00000423966 GPATCH3Q96I76 525 aa11.69□□□□□ -0.54
AFF3-206ENST00000423966 SIL1Q9H173 461 aa11.69□□□□□ -0.54
AFF3-206ENST00000423966 GREM2Q9H772 168 aa11.69□□□□□ -0.54
AFF3-206ENST00000423966 PA2G4Q9UQ80 394 aaKnown RBP11.69□□□□□ -0.54
AFF3-206ENST00000423966 POLRMTO00411 1230 aaKnown RBP11.68□□□□□ -0.54
AFF3-206ENST00000423966 DDX46Q7L014 1031 aaKnown RBP11.68□□□□□ -0.54
AFF3-206ENST00000423966 CCDC85AQ96PX6 553 aaPredicted RBP11.68□□□□□ -0.54
AFF3-206ENST00000423966 MPHOSPH8Q99549 860 aa11.68□□□□□ -0.54
AFF3-206ENST00000423966 CNNM1Q9NRU3 951 aa11.68□□□□□ -0.54
AFF3-206ENST00000423966 CEP126Q9P2H0 1117 aa11.68□□□□□ -0.54
AFF3-206ENST00000423966 SMARCA5O60264 1052 aaPredicted RBP11.67□□□□□ -0.54
AFF3-206ENST00000423966 MMP10P09238 476 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 IFIT2P09913 472 aaKnown RBP11.67□□□□□ -0.54
AFF3-206ENST00000423966 PRR5LQ6MZQ0 368 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 LDHAL6AQ6ZMR3 332 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 ANKRD18AQ8IVF6 992 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 BCL11AQ9H165 835 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 AKAP2Q9Y2D5 859 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 ABCC12Q96J65 1359 aa11.67□□□□□ -0.54
AFF3-206ENST00000423966 NRXN2Q9P2S2 1712 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 SPEF2Q9C093 1822 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 FAM205CA6NFA0 338 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 PDE6BP35913 854 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 DDR1Q08345 913 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 KLHDC4Q8TBB5 520 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 RPGRQ92834 1020 aaKnown RBP11.66□□□□□ -0.54
AFF3-206ENST00000423966 RBM17Q96I25 401 aaKnown RBP11.66□□□□□ -0.54
AFF3-206ENST00000423966 GPR108Q9NPR9 543 aa11.66□□□□□ -0.54
AFF3-206ENST00000423966 SRCAPQ6ZRS2 3230 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 AOX1Q06278 1338 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 MROH5Q6ZUA9 1318 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 ERC2O15083 957 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 PDE4AP27815 886 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 METTL24Q5JXM2 366 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 MSL1Q68DK7 614 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 PDCD7Q8N8D1 485 aaKnown RBP11.65□□□□□ -0.54
AFF3-206ENST00000423966 ZNF594Q96JF6 807 aaPredicted RBP11.65□□□□□ -0.54
AFF3-206ENST00000423966 BRIP1Q9BX63 1249 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 IL1RAPL2Q9NP60 686 aa11.65□□□□□ -0.54
AFF3-206ENST00000423966 SASH1O94885 1247 aa11.64□□□□□ -0.55
AFF3-206ENST00000423966 MX1P20591 662 aa11.64□□□□□ -0.55
AFF3-206ENST00000423966 TFCP2Q12800 502 aa11.64□□□□□ -0.55
AFF3-206ENST00000423966 ATG9AQ7Z3C6 839 aa11.64□□□□□ -0.55
AFF3-206ENST00000423966 AACSQ86V21 672 aa11.64□□□□□ -0.55
AFF3-206ENST00000423966 PLEKHM2Q8IWE5 1019 aa11.64□□□□□ -0.55
AFF3-206ENST00000423966 TTC41PQ6P2S7 1318 aa11.63□□□□□ -0.55
AFF3-206ENST00000423966 EIF5BO60841 1220 aaKnown RBP11.63□□□□□ -0.55
AFF3-206ENST00000423966 POLD1P28340 1107 aa11.63□□□□□ -0.55
AFF3-206ENST00000423966 PDE1AP54750 535 aa11.63□□□□□ -0.55
AFF3-206ENST00000423966 RPS8P62241 208 aaKnown RBP11.63□□□□□ -0.55
AFF3-206ENST00000423966 LRRC24Q50LG9 513 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms