RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 CPB1P15086 417 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 HOXB4P17483 251 aaPredicted RBP4.08□□□□□ -1.76
VPS13A-208ENST00000423463 BTBD6Q96KE9 485 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 ENAMQ9NRM1 1142 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 KANSL3Q9P2N6 904 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 J3QW42 95 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 M0R082 166 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 CYP2E1P05181 493 aaPredicted RBP4.08□□□□□ -1.76
VPS13A-208ENST00000423463 NPR3P17342 541 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 DGKGP49619 791 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 ZNF438Q7Z4V0 828 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 FAM35AQ86V20 835 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 ZNF417Q8TAU3 575 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 ZNF587Q96SQ5 575 aaPredicted RBP4.08□□□□□ -1.76
VPS13A-208ENST00000423463 TRAIPQ9BWF2 469 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 BIN2Q9UBW5 565 aaPredicted RBP4.08□□□□□ -1.76
VPS13A-208ENST00000423463 SLC6A14Q9UN76 642 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 FAM181BA6NEQ2 426 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 SOWAHDA6NJG2 315 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 EGFRP00533 1210 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 EGFL7Q9UHF1 273 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 STARD13Q9Y3M8 1113 aa4.08□□□□□ -1.76
VPS13A-208ENST00000423463 CARMIL1Q5VZK9 1371 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 GRIN2AQ12879 1464 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 PBRM1Q86U86 1689 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 ADARB2-AS1A8MUL3 147 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 EIF2AK2P19525 551 aaKnown RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 MZF1P28698 734 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 MARSP56192 900 aaKnown RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 PLAURQ03405 335 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 PSAPL1Q6NUJ1 521 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 NLRP13Q86W25 1043 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 LRRC4BQ9NT99 713 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 FAM13BQ9NYF5 915 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 ALAS2P22557 587 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 COL13A1Q5TAT6 717 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 ALKBH2Q6NS38 261 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 ELP3Q9H9T3 547 aa4.07□□□□□ -1.76
VPS13A-208ENST00000423463 JPH1Q9HDC5 661 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 ABI2Q9NYB9 513 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 FOXD3Q9UJU5 478 aaPredicted RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 GNEQ9Y223 722 aaKnown RBP4.07□□□□□ -1.76
VPS13A-208ENST00000423463 NUP160Q12769 1436 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 ADAMTS12P58397 1594 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 CHD1O14646 1710 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 PSAPP07602 524 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 IRS1P35568 1242 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 PERM1Q5SV97 790 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 SUV39H2Q9H5I1 410 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 TLR7Q9NYK1 1049 aaKnown RBP4.06□□□□□ -1.76
VPS13A-208ENST00000423463 CNTN3Q9P232 1028 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 FNDC3AQ9Y2H6 1198 aaKnown RBP4.06□□□□□ -1.76
VPS13A-208ENST00000423463 MAP3K6O95382 1288 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 ACPPP15309 386 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 GPLD1P80108 840 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 C1orf127Q8N9H9 656 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 TTC16Q8NEE8 873 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 TRPM4Q8TD43 1214 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 LPIN3Q9BQK8 851 aa4.06□□□□□ -1.76
VPS13A-208ENST00000423463 CLASP1Q7Z460 1538 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 RUSC2Q8N2Y8 1516 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 PCSK2P16519 638 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 PDE12Q6L8Q7 609 aaKnown RBP4.05□□□□□ -1.76
VPS13A-208ENST00000423463 PODNQ7Z5L7 613 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 GJD3Q8N144 294 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 TRIM11Q96F44 468 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 BRPF3Q9ULD4 1205 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 EEA1Q15075 1411 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 TNFRSF21O75509 655 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 TRPA1O75762 1119 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 ATP11AP98196 1134 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 TTC39BQ5VTQ0 682 aaPredicted RBP4.05□□□□□ -1.76
VPS13A-208ENST00000423463 MICALL1Q8N3F8 863 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 OR13H1Q8NG92 308 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 TMC1Q8TDI8 760 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 EFCC1Q9HA90 598 aa4.05□□□□□ -1.76
VPS13A-208ENST00000423463 FAM229AH3BQW9 127 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 GPR182O15218 404 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 NDUFB5O43674 189 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 NRLP54845 237 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 KCNA1Q09470 495 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 LINC00114Q6XXX2 140 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 C20orf204Q6ZNR8 217 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 SMG9Q9H0W8 520 aaKnown RBP4.04□□□□□ -1.76
VPS13A-208ENST00000423463 CHRDQ9H2X0 955 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 C11orf16Q9NQ32 467 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 MKL2Q9ULH7 1088 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 ARHGEF11O15085 1522 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 RAPGEF2Q9Y4G8 1499 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 CUL7Q14999 1698 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 PHF20L1A8MW92 1017 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 EREGO14944 169 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 LILRB5O75023 590 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 COL8A1P27658 744 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 SOX18P35713 384 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 ORC1Q13415 861 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 CYB5RLQ6IPT4 315 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 GDF6Q6KF10 455 aaPredicted RBP4.04□□□□□ -1.76
VPS13A-208ENST00000423463 ELMSAN1Q6PJG2 1045 aa4.04□□□□□ -1.76
VPS13A-208ENST00000423463 ADAMTSL4Q6UY14 1074 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms