RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 MEIS3Q99687 375 aa23.51■■□□□ 1.35
MCF2L-214ENST00000423251 ZNF277Q9NRM2 450 aaPredicted RBP23.51■■□□□ 1.35
MCF2L-214ENST00000423251 TAF1P21675 1872 aa23.5■■□□□ 1.35
MCF2L-214ENST00000423251 ANKRD18BA2A2Z9 1011 aa23.5■■□□□ 1.35
MCF2L-214ENST00000423251 PLIN1O60240 522 aa23.5■■□□□ 1.35
MCF2L-214ENST00000423251 BICC1Q9H694 974 aaKnown RBP23.5■■□□□ 1.35
MCF2L-214ENST00000423251 ZNF541Q9H0D2 1346 aa23.5■■□□□ 1.35
MCF2L-214ENST00000423251 CCDC57Q2TAC2 916 aa23.49■■□□□ 1.35
MCF2L-214ENST00000423251 COL13A1Q5TAT6 717 aaPredicted RBP23.49■■□□□ 1.35
MCF2L-214ENST00000423251 CHADLQ6NUI6 762 aa23.49■■□□□ 1.35
MCF2L-214ENST00000423251 ANKRD44Q8N8A2 993 aa23.49■■□□□ 1.35
MCF2L-214ENST00000423251 PANK1Q8TE04 598 aa23.49■■□□□ 1.35
MCF2L-214ENST00000423251 BSDC1Q9NW68 430 aaPredicted RBP23.49■■□□□ 1.35
MCF2L-214ENST00000423251 CHMP3Q9Y3E7 222 aa23.49■■□□□ 1.35
MCF2L-214ENST00000423251 PDE3AQ14432 1141 aa23.48■■□□□ 1.35
MCF2L-214ENST00000423251 ITPRIPQ8IWB1 547 aa23.48■■□□□ 1.35
MCF2L-214ENST00000423251 PSMD1Q99460 953 aa23.48■■□□□ 1.35
MCF2L-214ENST00000423251 SNED1Q8TER0 1413 aa23.48■■□□□ 1.35
MCF2L-214ENST00000423251 IGHMBP2P38935 993 aaKnown RBP23.47■■□□□ 1.35
MCF2L-214ENST00000423251 IQCA1LA6NCM1 817 aa23.46■■□□□ 1.35
MCF2L-214ENST00000423251 ZBTB7BO15156 539 aaPredicted RBP23.46■■□□□ 1.35
MCF2L-214ENST00000423251 MPNDQ8N594 471 aa23.46■■□□□ 1.35
MCF2L-214ENST00000423251 L3MBTL3Q96JM7 780 aaPredicted RBP23.46■■□□□ 1.35
MCF2L-214ENST00000423251 LRRFIP2Q9Y608 721 aaKnown RBP23.46■■□□□ 1.35
MCF2L-214ENST00000423251 HSPA1AP0DMV8 641 aaKnown RBP23.45■■□□□ 1.34
MCF2L-214ENST00000423251 HSPA1BP0DMV9 641 aaKnown RBP23.45■■□□□ 1.34
MCF2L-214ENST00000423251 MPHOSPH8Q99549 860 aa23.45■■□□□ 1.34
MCF2L-214ENST00000423251 RTFDC1Q9BY42 306 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-214ENST00000423251 TAF1DQ9H5J8 278 aaPredicted RBP23.45■■□□□ 1.34
MCF2L-214ENST00000423251 COL4A1P02462 1669 aa23.44■■□□□ 1.34
MCF2L-214ENST00000423251 GNAI2P04899 355 aa23.44■■□□□ 1.34
MCF2L-214ENST00000423251 DPP8Q6V1X1 898 aaPredicted RBP23.44■■□□□ 1.34
MCF2L-214ENST00000423251 SLC51AQ86UW1 340 aa23.44■■□□□ 1.34
MCF2L-214ENST00000423251 SUPT20HQ8NEM7 779 aa23.44■■□□□ 1.34
MCF2L-214ENST00000423251 VPS33BQ9H267 617 aa23.44■■□□□ 1.34
MCF2L-214ENST00000423251 IARSP41252 1262 aaKnown RBP23.43■■□□□ 1.34
MCF2L-214ENST00000423251 MVPQ14764 893 aaKnown RBP23.43■■□□□ 1.34
MCF2L-214ENST00000423251 TAF7LQ5H9L4 462 aa23.43■■□□□ 1.34
MCF2L-214ENST00000423251 PODXL2Q9NZ53 605 aa23.43■■□□□ 1.34
MCF2L-214ENST00000423251 MINPP1Q9UNW1 487 aa23.43■■□□□ 1.34
MCF2L-214ENST00000423251 NSFL1CQ9UNZ2 370 aaKnown RBP23.43■■□□□ 1.34
MCF2L-214ENST00000423251 ADAMTSL1Q8N6G6 1762 aa23.42■■□□□ 1.34
MCF2L-214ENST00000423251 COL4A5P29400 1685 aa23.42■■□□□ 1.34
MCF2L-214ENST00000423251 GPSM2P81274 684 aa23.42■■□□□ 1.34
MCF2L-214ENST00000423251 LDHDQ86WU2 507 aa23.42■■□□□ 1.34
MCF2L-214ENST00000423251 CREBZFQ9NS37 354 aa23.42■■□□□ 1.34
MCF2L-214ENST00000423251 MKRN1Q9UHC7 482 aaKnown RBP23.42■■□□□ 1.34
MCF2L-214ENST00000423251 ZNF594Q96JF6 807 aaPredicted RBP23.41■■□□□ 1.34
MCF2L-214ENST00000423251 CHMP4BQ9H444 224 aaKnown RBP23.41■■□□□ 1.34
MCF2L-214ENST00000423251 DDX19BQ9UMR2 479 aa23.41■■□□□ 1.34
MCF2L-214ENST00000423251 COG6Q9Y2V7 657 aa23.41■■□□□ 1.34
MCF2L-214ENST00000423251 LRRC37AA6NMS7 1700 aa23.4■■□□□ 1.34
MCF2L-214ENST00000423251 RRP1P56182 461 aaKnown RBP23.4■■□□□ 1.34
MCF2L-214ENST00000423251 EAPPQ56P03 285 aaPredicted RBP23.4■■□□□ 1.34
MCF2L-214ENST00000423251 C20orf194Q5TEA3 1177 aa23.4■■□□□ 1.34
MCF2L-214ENST00000423251 LDHAL6AQ6ZMR3 332 aa23.4■■□□□ 1.34
MCF2L-214ENST00000423251 ANKIB1Q9P2G1 1089 aa23.4■■□□□ 1.34
MCF2L-214ENST00000423251 PASKQ96RG2 1323 aa23.39■■□□□ 1.34
MCF2L-214ENST00000423251 FZD9O00144 591 aa23.39■■□□□ 1.33
MCF2L-214ENST00000423251 MTX1Q13505 466 aa23.39■■□□□ 1.33
MCF2L-214ENST00000423251 ANKRD2Q9GZV1 360 aa23.39■■□□□ 1.33
MCF2L-214ENST00000423251 HACL1Q9UJ83 578 aa23.39■■□□□ 1.33
MCF2L-214ENST00000423251 XDHP47989 1333 aa23.38■■□□□ 1.33
MCF2L-214ENST00000423251 RFX5P48382 616 aaPredicted RBP23.38■■□□□ 1.33
MCF2L-214ENST00000423251 TBC1D16Q8TBP0 767 aa23.38■■□□□ 1.33
MCF2L-214ENST00000423251 POLLQ9UGP5 575 aa23.38■■□□□ 1.33
MCF2L-214ENST00000423251 GGA1Q9UJY5 639 aa23.38■■□□□ 1.33
MCF2L-214ENST00000423251 C6orf229H3BNL8 230 aa23.37■■□□□ 1.33
MCF2L-214ENST00000423251 ATP2B4P23634 1241 aa23.37■■□□□ 1.33
MCF2L-214ENST00000423251 EPHX2P34913 555 aa23.37■■□□□ 1.33
MCF2L-214ENST00000423251 TNS4Q8IZW8 715 aa23.37■■□□□ 1.33
MCF2L-214ENST00000423251 CNNM1Q9NRU3 951 aa23.37■■□□□ 1.33
MCF2L-214ENST00000423251 LTBP1Q14766 1721 aa23.36■■□□□ 1.33
MCF2L-214ENST00000423251 PTPN12Q05209 780 aaKnown RBP23.36■■□□□ 1.33
MCF2L-214ENST00000423251 CHRNDQ07001 517 aa23.36■■□□□ 1.33
MCF2L-214ENST00000423251 EYA3Q99504 573 aa23.36■■□□□ 1.33
MCF2L-214ENST00000423251 RIPOR2Q9Y4F9 1068 aa23.36■■□□□ 1.33
MCF2L-214ENST00000423251 SRGAP3O43295 1099 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 KIAA2012Q0VF49 1180 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 WASHC4Q2M389 1173 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 JDP2Q8WYK2 163 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 ZBTB40Q9NUA8 1239 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 FBXO3Q9UK99 471 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 CLEC11AQ9Y240 323 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 LEMD3Q9Y2U8 911 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 CNTNAP1P78357 1384 aa23.35■■□□□ 1.33
MCF2L-214ENST00000423251 PPIP5K2O43314 1243 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 CAPN15O75808 1086 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 UFL1O94874 794 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 ATP8B2P98198 1209 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 GPC2Q8N158 579 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 LARGE2Q8N3Y3 721 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 KLHDC4Q8TBB5 520 aa23.34■■□□□ 1.33
MCF2L-214ENST00000423251 PUS3Q9BZE2 481 aaKnown RBP23.34■■□□□ 1.33
MCF2L-214ENST00000423251 ITGBL1O95965 494 aaPredicted RBP23.33■■□□□ 1.33
MCF2L-214ENST00000423251 AOC3Q16853 763 aa23.33■■□□□ 1.33
MCF2L-214ENST00000423251 COPRSQ9NQ92 184 aa23.33■■□□□ 1.33
MCF2L-214ENST00000423251 GJA3Q9Y6H8 435 aa23.33■■□□□ 1.33
MCF2L-214ENST00000423251 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.32
MCF2L-214ENST00000423251 DUOX1Q9NRD9 1551 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms