RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 TRIM44Q96DX7 344 aaPredicted RBP27.65■■■□□ 2.02
LSM8-203ENST00000422760 UPF3BQ9BZI7 483 aaKnown RBP27.65■■■□□ 2.02
LSM8-203ENST00000422760 SNX14Q9Y5W7 946 aa27.65■■■□□ 2.02
LSM8-203ENST00000422760 ANKRD18BA2A2Z9 1011 aa27.64■■■□□ 2.02
LSM8-203ENST00000422760 KCNQ4P56696 695 aa27.64■■■□□ 2.02
LSM8-203ENST00000422760 FAM182BQ5T319 152 aa27.64■■■□□ 2.02
LSM8-203ENST00000422760 ZDHHC9Q9Y397 364 aa27.64■■■□□ 2.02
LSM8-203ENST00000422760 SPEF2Q9C093 1822 aa27.64■■■□□ 2.02
LSM8-203ENST00000422760 SBF2Q86WG5 1849 aa27.63■■■□□ 2.01
LSM8-203ENST00000422760 PARP10Q53GL7 1025 aa27.63■■■□□ 2.01
LSM8-203ENST00000422760 PPP1R9BQ96SB3 815 aa27.63■■■□□ 2.01
LSM8-203ENST00000422760 RRAGDQ9NQL2 400 aaPredicted RBP27.63■■■□□ 2.01
LSM8-203ENST00000422760 SCN7AQ01118 1682 aa27.63■■■□□ 2.01
LSM8-203ENST00000422760 DDX46Q7L014 1031 aaKnown RBP27.63■■■□□ 2.01
LSM8-203ENST00000422760 RASEFQ8IZ41 740 aa27.63■■■□□ 2.01
LSM8-203ENST00000422760 UTP14AQ9BVJ6 771 aaKnown RBP27.63■■■□□ 2.01
LSM8-203ENST00000422760 AKAP2Q9Y2D5 859 aa27.63■■■□□ 2.01
LSM8-203ENST00000422760 CNTNAP4Q9C0A0 1308 aa27.62■■■□□ 2.01
LSM8-203ENST00000422760 ATRNO75882 1429 aa27.62■■■□□ 2.01
LSM8-203ENST00000422760 AK7Q96M32 723 aa27.62■■■□□ 2.01
LSM8-203ENST00000422760 NASPP49321 788 aaPredicted RBP27.61■■■□□ 2.01
LSM8-203ENST00000422760 LDHAL6AQ6ZMR3 332 aa27.61■■■□□ 2.01
LSM8-203ENST00000422760 NIP7Q9Y221 180 aaKnown RBP eCLIP27.61■■■□□ 2.01
LSM8-203ENST00000422760 RIPOR2Q9Y4F9 1068 aa27.61■■■□□ 2.01
LSM8-203ENST00000422760 FAM177BA6PVY3 158 aa27.61■■■□□ 2.01
LSM8-203ENST00000422760 KLHL34Q8N239 644 aa27.6■■■□□ 2.01
LSM8-203ENST00000422760 KBTBD3Q8NAB2 608 aa27.6■■■□□ 2.01
LSM8-203ENST00000422760 ZNF652Q9Y2D9 606 aa27.6■■■□□ 2.01
LSM8-203ENST00000422760 METTL24Q5JXM2 366 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 ZNF589Q86UQ0 364 aaPredicted RBP27.59■■■□□ 2.01
LSM8-203ENST00000422760 PAG1Q9NWQ8 432 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 LY75O60449 1722 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 GOLIM4O00461 696 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 NTSR2O95665 410 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 HCLS1P14317 486 aaPredicted RBP27.59■■■□□ 2.01
LSM8-203ENST00000422760 ADORA1P30542 326 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 PKP1Q13835 747 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 ZSCAN23Q3MJ62 389 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 MAP4K1Q92918 833 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 CNNM1Q9NRU3 951 aa27.59■■■□□ 2.01
LSM8-203ENST00000422760 PRPF40BQ6NWY9 871 aaKnown RBP27.58■■■□□ 2.01
LSM8-203ENST00000422760 XAGE2Q96GT9 111 aa27.58■■■□□ 2.01
LSM8-203ENST00000422760 RBM8AQ9Y5S9 174 aaKnown RBP27.58■■■□□ 2.01
LSM8-203ENST00000422760 WDR33Q9C0J8 1336 aaKnown RBP27.58■■■□□ 2.01
LSM8-203ENST00000422760 TAF1LQ8IZX4 1826 aa27.57■■■□□ 2
LSM8-203ENST00000422760 IFIT1P09914 478 aaKnown RBP27.57■■■□□ 2
LSM8-203ENST00000422760 NECTIN1Q15223 517 aa27.57■■■□□ 2
LSM8-203ENST00000422760 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.57■■■□□ 2
LSM8-203ENST00000422760 KCNB2Q92953 911 aa27.57■■■□□ 2
LSM8-203ENST00000422760 TRPC5Q9UL62 973 aaPredicted RBP27.57■■■□□ 2
LSM8-203ENST00000422760 ESPNB1AK53 854 aa27.56■■■□□ 2
LSM8-203ENST00000422760 PRPF40AO75400 957 aaKnown RBP27.56■■■□□ 2
LSM8-203ENST00000422760 CHGBP05060 677 aa27.56■■■□□ 2
LSM8-203ENST00000422760 ATP2B3Q16720 1220 aa27.56■■■□□ 2
LSM8-203ENST00000422760 HS1BP3Q53T59 392 aa27.56■■■□□ 2
LSM8-203ENST00000422760 CCDC158Q5M9N0 1113 aa27.56■■■□□ 2
LSM8-203ENST00000422760 CAVIN1Q6NZI2 390 aaKnown RBP27.56■■■□□ 2
LSM8-203ENST00000422760 CLEC4GQ6UXB4 293 aa27.56■■■□□ 2
LSM8-203ENST00000422760 SYAP1Q96A49 352 aaPredicted RBP27.56■■■□□ 2
LSM8-203ENST00000422760 GORABQ5T7V8 394 aa27.55■■■□□ 2
LSM8-203ENST00000422760 VGLL2Q8N8G2 317 aa27.55■■■□□ 2
LSM8-203ENST00000422760 ONECUT3O60422 494 aaPredicted RBP27.55■■■□□ 2
LSM8-203ENST00000422760 PDIA4P13667 645 aaKnown RBP27.55■■■□□ 2
LSM8-203ENST00000422760 KCNJ4P48050 445 aa27.55■■■□□ 2
LSM8-203ENST00000422760 TTC39AQ5SRH9 613 aa27.55■■■□□ 2
LSM8-203ENST00000422760 NOL8Q76FK4 1167 aaKnown RBP27.55■■■□□ 2
LSM8-203ENST00000422760 ABCC12Q96J65 1359 aa27.54■■■□□ 2
LSM8-203ENST00000422760 CREB3L3Q68CJ9 461 aa27.53■■■□□ 2
LSM8-203ENST00000422760 TTC14Q96N46 770 aa27.53■■■□□ 2
LSM8-203ENST00000422760 TM6SF1Q9BZW5 370 aa27.53■■■□□ 2
LSM8-203ENST00000422760 CCNL1Q9UK58 526 aaPredicted RBP27.53■■■□□ 2
LSM8-203ENST00000422760 ARAP2Q8WZ64 1704 aa27.53■■■□□ 2
LSM8-203ENST00000422760 CASZ1Q86V15 1759 aa27.53■■■□□ 2
LSM8-203ENST00000422760 TAF5LO75529 589 aa27.53■■■□□ 2
LSM8-203ENST00000422760 NCLP19338 710 aaKnown RBP27.53■■■□□ 2
LSM8-203ENST00000422760 CASTP20810 708 aaKnown RBP27.52■■■□□ 2
LSM8-203ENST00000422760 RC3H1Q5TC82 1133 aaKnown RBP27.52■■■□□ 2
LSM8-203ENST00000422760 TICAM2Q86XR7 235 aa27.52■■■□□ 2
LSM8-203ENST00000422760 SEPT12Q8IYM1 358 aa27.52■■■□□ 2
LSM8-203ENST00000422760 SEC62Q99442 399 aaKnown RBP27.52■■■□□ 2
LSM8-203ENST00000422760 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.52■■■□□ 2
LSM8-203ENST00000422760 HSP90B1P14625 803 aaKnown RBP27.51■■■□□ 2
LSM8-203ENST00000422760 ZKSCAN1P17029 563 aaPredicted RBP27.51■■■□□ 2
LSM8-203ENST00000422760 ADCK5Q3MIX3 580 aa27.51■■■□□ 2
LSM8-203ENST00000422760 JAKMIP1Q96N16 626 aaKnown RBP27.51■■■□□ 2
LSM8-203ENST00000422760 RTL9Q8NET4 1388 aa27.51■■□□□ 1.99
LSM8-203ENST00000422760 SLC27A2O14975 620 aa27.51■■□□□ 1.99
LSM8-203ENST00000422760 PDE8BO95263 885 aa27.51■■□□□ 1.99
LSM8-203ENST00000422760 MCMDC2Q4G0Z9 681 aa27.51■■□□□ 1.99
LSM8-203ENST00000422760 GPT2Q8TD30 523 aa27.51■■□□□ 1.99
LSM8-203ENST00000422760 AKAP11Q9UKA4 1901 aa27.5■■□□□ 1.99
LSM8-203ENST00000422760 CCDC152Q4G0S7 254 aa27.5■■□□□ 1.99
LSM8-203ENST00000422760 CCDC129Q6ZRS4 1044 aa27.5■■□□□ 1.99
LSM8-203ENST00000422760 SMIM5Q71RC9 77 aa27.5■■□□□ 1.99
LSM8-203ENST00000422760 LIMCH1Q9UPQ0 1083 aa27.5■■□□□ 1.99
LSM8-203ENST00000422760 RGL2O15211 777 aa27.49■■□□□ 1.99
LSM8-203ENST00000422760 RPS6KA4O75676 772 aa27.49■■□□□ 1.99
LSM8-203ENST00000422760 PHF14O94880 888 aa27.49■■□□□ 1.99
LSM8-203ENST00000422760 SCARF1Q14162 830 aa27.49■■□□□ 1.99
LSM8-203ENST00000422760 LRSAM1Q6UWE0 723 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms