RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 WAPLQ7Z5K2 1190 aa15.39■□□□□ 0.05
CALD1-205ENST00000422748 CNTROBQ8N137 903 aa15.39■□□□□ 0.05
CALD1-205ENST00000422748 TM6SF1Q9BZW5 370 aa15.39■□□□□ 0.05
CALD1-205ENST00000422748 COL9A3Q14050 684 aaPredicted RBP15.39■□□□□ 0.05
CALD1-205ENST00000422748 GPATCH11Q8N954 259 aa15.39■□□□□ 0.05
CALD1-205ENST00000422748 CCDC150Q8NCX0 1101 aa15.39■□□□□ 0.05
CALD1-205ENST00000422748 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
CALD1-205ENST00000422748 SRRTQ9BXP5 876 aaKnown RBP15.39■□□□□ 0.05
CALD1-205ENST00000422748 ARHGAP23Q9P227 1491 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 SLIT1O75093 1534 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 PRR29P0C7W0 189 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 SFPQP23246 707 aaKnown RBP eCLIP15.38■□□□□ 0.05
CALD1-205ENST00000422748 SART3Q15020 963 aaKnown RBP15.38■□□□□ 0.05
CALD1-205ENST00000422748 FUT8Q9BYC5 575 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 LRRFIP1Q32MZ4 808 aaKnown RBP15.38■□□□□ 0.05
CALD1-205ENST00000422748 FOXR1Q6PIV2 292 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 TRIM65Q6PJ69 517 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 LEKR1Q6ZMV7 388 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 ARFGAP3Q9NP61 516 aa15.38■□□□□ 0.05
CALD1-205ENST00000422748 PLEKHG1Q9ULL1 1385 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 KCNJ6P48051 423 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 PARP3Q9Y6F1 533 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 RAB11FIP3O75154 756 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 IVLP07476 585 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 ATP2B1P20020 1258 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 CDK19Q9BWU1 502 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 ANO10Q9NW15 660 aa15.37■□□□□ 0.05
CALD1-205ENST00000422748 CPS1P31327 1500 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 CTAGE5O15320 804 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 SMC2O95347 1197 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 APPP05067 770 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 CEBPZQ03701 1054 aaKnown RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 GNL2Q13823 731 aaKnown RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 CEP57L1Q8IYX8 460 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 ERCC4Q92889 916 aaPredicted RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 XPO4Q9C0E2 1151 aaKnown RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 MIS18AQ9NYP9 233 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 TTC41PQ6P2S7 1318 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 EIF3CLB5ME19 914 aaKnown RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 TCEANC2Q96MN5 208 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 EIF3CQ99613 913 aaKnown RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 GOLPH3LQ9H4A5 285 aa15.36■□□□□ 0.05
CALD1-205ENST00000422748 SOS1Q07889 1333 aaPredicted RBP15.36■□□□□ 0.05
CALD1-205ENST00000422748 CCAR1Q8IX12 1150 aaKnown RBP15.35■□□□□ 0.05
CALD1-205ENST00000422748 GPR161Q8N6U8 529 aaKnown RBP15.35■□□□□ 0.05
CALD1-205ENST00000422748 KCNB2Q92953 911 aa15.35■□□□□ 0.05
CALD1-205ENST00000422748 IFNKQ9P0W0 207 aa15.35■□□□□ 0.05
CALD1-205ENST00000422748 RESTQ13127 1097 aa15.35■□□□□ 0.05
CALD1-205ENST00000422748 DDX11Q96FC9 970 aa15.35■□□□□ 0.05
CALD1-205ENST00000422748 PARD6BQ9BYG5 372 aa15.35■□□□□ 0.05
CALD1-205ENST00000422748 CHD2O14647 1828 aaKnown RBP15.34■□□□□ 0.05
CALD1-205ENST00000422748 GIGYF1O75420 1035 aaPredicted RBP15.34■□□□□ 0.05
CALD1-205ENST00000422748 STK3Q13188 491 aa15.34■□□□□ 0.05
CALD1-205ENST00000422748 NRDCO43847 1150 aa15.34■□□□□ 0.05
CALD1-205ENST00000422748 NECTIN1Q15223 517 aa15.34■□□□□ 0.05
CALD1-205ENST00000422748 VPS18Q9P253 973 aa15.34■□□□□ 0.05
CALD1-205ENST00000422748 PATL2C9JE40 543 aaKnown RBP15.33■□□□□ 0.05
CALD1-205ENST00000422748 CLGNO14967 610 aa15.33■□□□□ 0.05
CALD1-205ENST00000422748 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.05
CALD1-205ENST00000422748 E2F4Q16254 413 aa15.33■□□□□ 0.05
CALD1-205ENST00000422748 CT47A1Q5JQC4 288 aaPredicted RBP15.33■□□□□ 0.05
CALD1-205ENST00000422748 CC2D2BQ6DHV5 1058 aa15.33■□□□□ 0.05
CALD1-205ENST00000422748 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.05
CALD1-205ENST00000422748 DEF6Q9H4E7 631 aa15.33■□□□□ 0.05
CALD1-205ENST00000422748 ATP7BP35670 1465 aa15.33■□□□□ 0.04
CALD1-205ENST00000422748 ANKRD65E5RJM6 399 aa15.33■□□□□ 0.04
CALD1-205ENST00000422748 ZKSCAN1P17029 563 aaPredicted RBP15.33■□□□□ 0.04
CALD1-205ENST00000422748 RRS1Q15050 365 aaKnown RBP15.33■□□□□ 0.04
CALD1-205ENST00000422748 LONRF2Q1L5Z9 754 aa15.33■□□□□ 0.04
CALD1-205ENST00000422748 TXNDC2Q86VQ3 553 aa15.33■□□□□ 0.04
CALD1-205ENST00000422748 ZRANB1Q9UGI0 708 aa15.33■□□□□ 0.04
CALD1-205ENST00000422748 CCP110O43303 1012 aa15.32■□□□□ 0.04
CALD1-205ENST00000422748 CREB3L3Q68CJ9 461 aa15.32■□□□□ 0.04
CALD1-205ENST00000422748 FAM177A1Q8N128 213 aaPredicted RBP15.32■□□□□ 0.04
CALD1-205ENST00000422748 JAK2O60674 1132 aa15.32■□□□□ 0.04
CALD1-205ENST00000422748 RUFY2Q8WXA3 655 aa15.32■□□□□ 0.04
CALD1-205ENST00000422748 FTOQ9C0B1 505 aaKnown RBP eCLIP15.32■□□□□ 0.042e-6■■□□□ 12.1
CALD1-205ENST00000422748 NAT10Q9H0A0 1025 aaKnown RBP15.32■□□□□ 0.04
CALD1-205ENST00000422748 RBM8AQ9Y5S9 174 aaKnown RBP15.32■□□□□ 0.04
CALD1-205ENST00000422748 KINO60870 393 aaKnown RBP15.31■□□□□ 0.04
CALD1-205ENST00000422748 RSRC2Q7L4I2 434 aaKnown RBP15.31■□□□□ 0.04
CALD1-205ENST00000422748 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 CFAP45Q9UL16 551 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 ROBO2Q9HCK4 1378 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 MAP2K7O14733 419 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 PPP2R3AQ06190 1150 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 CCDC73Q6ZRK6 1079 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 EP400NLQ6ZTU2 488 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 SSH3Q8TE77 659 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 BRF1Q92994 677 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 PDE11AQ9HCR9 933 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 ADAMTSL3P82987 1691 aa15.31■□□□□ 0.04
CALD1-205ENST00000422748 RPS6KA5O75582 802 aa15.3■□□□□ 0.04
CALD1-205ENST00000422748 CORO7P57737 925 aa15.3■□□□□ 0.04
CALD1-205ENST00000422748 AXDND1Q5T1B0 1012 aaPredicted RBP15.3■□□□□ 0.04
CALD1-205ENST00000422748 ZSCAN16Q9H4T2 348 aaPredicted RBP15.3■□□□□ 0.04
CALD1-205ENST00000422748 RIMS1Q86UR5 1692 aaKnown RBP15.3■□□□□ 0.04
CALD1-205ENST00000422748 PTPRUQ92729 1446 aa15.3■□□□□ 0.04
CALD1-205ENST00000422748 CRYBG1Q9Y4K1 1723 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms