RNA–Protein interactions for RNA: ENST00000422713.1

TTC38-204, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 5

Gene TTC38, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-204ENST00000422713 CNTROBQ8N137 903 aa16.78■□□□□ 0.28
TTC38-204ENST00000422713 TTLL11Q8NHH1 800 aa16.78■□□□□ 0.28
TTC38-204ENST00000422713 BCL2L13Q9BXK5 485 aa16.78■□□□□ 0.28
TTC38-204ENST00000422713 PODXL2Q9NZ53 605 aa16.78■□□□□ 0.28
TTC38-204ENST00000422713 GGA1Q9UJY5 639 aa16.78■□□□□ 0.28
TTC38-204ENST00000422713 F6X3S4 739 aa16.77■□□□□ 0.28
TTC38-204ENST00000422713 H7C1W4 665 aa16.77■□□□□ 0.28
TTC38-204ENST00000422713 ECE2O60344 883 aa16.77■□□□□ 0.28
TTC38-204ENST00000422713 DOK7Q18PE1 504 aa16.77■□□□□ 0.28
TTC38-204ENST00000422713 MKRN1Q9UHC7 482 aaKnown RBP16.77■□□□□ 0.28
TTC38-204ENST00000422713 SCN9AQ15858 1988 aa16.77■□□□□ 0.27
TTC38-204ENST00000422713 XDHP47989 1333 aa16.76■□□□□ 0.27
TTC38-204ENST00000422713 PSMD14O00487 310 aa16.76■□□□□ 0.27
TTC38-204ENST00000422713 FAM161AQ3B820 660 aa16.76■□□□□ 0.27
TTC38-204ENST00000422713 ZC3H12CQ9C0D7 883 aaKnown RBP16.76■□□□□ 0.27
TTC38-204ENST00000422713 CNTNAP1P78357 1384 aa16.76■□□□□ 0.27
TTC38-204ENST00000422713 TMEM88BA6NKF7 163 aa16.75■□□□□ 0.27
TTC38-204ENST00000422713 CASP7P55210 303 aa16.75■□□□□ 0.27
TTC38-204ENST00000422713 PLA2G12BQ9BX93 195 aa16.75■□□□□ 0.27
TTC38-204ENST00000422713 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
TTC38-204ENST00000422713 SHTN1A0MZ66 631 aa16.74■□□□□ 0.27
TTC38-204ENST00000422713 MICALL2Q8IY33 904 aa16.74■□□□□ 0.27
TTC38-204ENST00000422713 TRPM4Q8TD43 1214 aa16.74■□□□□ 0.27
TTC38-204ENST00000422713 PSME4Q14997 1843 aa16.73■□□□□ 0.27
TTC38-204ENST00000422713 E9PSI1 815 aa16.73■□□□□ 0.27
TTC38-204ENST00000422713 G3V3G9 751 aa16.73■□□□□ 0.27
TTC38-204ENST00000422713 ITGA6P23229 1130 aa16.73■□□□□ 0.27
TTC38-204ENST00000422713 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
TTC38-204ENST00000422713 BEND3Q5T5X7 828 aa16.73■□□□□ 0.27
TTC38-204ENST00000422713 DCAF8Q5TAQ9 597 aa16.73■□□□□ 0.27
TTC38-204ENST00000422713 BSDC1Q9NW68 430 aaPredicted RBP16.73■□□□□ 0.27
TTC38-204ENST00000422713 TRPM7Q96QT4 1865 aa16.72■□□□□ 0.27
TTC38-204ENST00000422713 TRAF5O00463 557 aa16.72■□□□□ 0.27
TTC38-204ENST00000422713 ATP2B4P23634 1241 aa16.72■□□□□ 0.27
TTC38-204ENST00000422713 CNOT7Q9UIV1 285 aaKnown RBP16.72■□□□□ 0.27
TTC38-204ENST00000422713 MINPP1Q9UNW1 487 aa16.72■□□□□ 0.27
TTC38-204ENST00000422713 MED23Q9ULK4 1368 aa16.72■□□□□ 0.27
TTC38-204ENST00000422713 H7C1D1 291 aa16.71■□□□□ 0.27
TTC38-204ENST00000422713 HSPA1AP0DMV8 641 aaKnown RBP16.71■□□□□ 0.27
TTC38-204ENST00000422713 HSPA1BP0DMV9 641 aaKnown RBP16.71■□□□□ 0.27
TTC38-204ENST00000422713 RPS12P25398 132 aaKnown RBP16.71■□□□□ 0.27
TTC38-204ENST00000422713 FMR1Q06787 632 aaKnown RBP eCLIP16.71■□□□□ 0.27
TTC38-204ENST00000422713 SLC4A10Q6U841 1118 aa16.71■□□□□ 0.27
TTC38-204ENST00000422713 DPF2Q92785 391 aa16.71■□□□□ 0.27
TTC38-204ENST00000422713 KCNQ5Q9NR82 932 aa16.71■□□□□ 0.27
TTC38-204ENST00000422713 ABT1Q9ULW3 272 aaKnown RBP16.71■□□□□ 0.27
TTC38-204ENST00000422713 A0A1B0GUL6 1792 aa16.71■□□□□ 0.27
TTC38-204ENST00000422713 ZNF609O15014 1411 aa16.7■□□□□ 0.26
TTC38-204ENST00000422713 GRM8O00222 908 aa16.7■□□□□ 0.26
TTC38-204ENST00000422713 HIRAP54198 1017 aaPredicted RBP16.7■□□□□ 0.26
TTC38-204ENST00000422713 MPHOSPH8Q99549 860 aa16.7■□□□□ 0.26
TTC38-204ENST00000422713 CHMP3Q9Y3E7 222 aa16.7■□□□□ 0.26
TTC38-204ENST00000422713 CCER2I3L3R5 266 aa16.69■□□□□ 0.26
TTC38-204ENST00000422713 CSF1RP07333 972 aa16.69■□□□□ 0.26
TTC38-204ENST00000422713 CCT4P50991 539 aaKnown RBP16.69■□□□□ 0.26
TTC38-204ENST00000422713 TBC1D10BQ4KMP7 808 aaPredicted RBP16.69■□□□□ 0.26
TTC38-204ENST00000422713 SAMD7Q7Z3H4 446 aa16.69■□□□□ 0.26
TTC38-204ENST00000422713 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
TTC38-204ENST00000422713 SRCIN1Q9C0H9 1055 aa16.69■□□□□ 0.26
TTC38-204ENST00000422713 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
TTC38-204ENST00000422713 WTIPA6NIX2 430 aaPredicted RBP16.68■□□□□ 0.26
TTC38-204ENST00000422713 RASSF10A6NK89 507 aa16.68■□□□□ 0.26
TTC38-204ENST00000422713 SLFN5Q08AF3 891 aa16.68■□□□□ 0.26
TTC38-204ENST00000422713 ZC3H15Q8WU90 426 aaKnown RBP16.68■□□□□ 0.26
TTC38-204ENST00000422713 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
TTC38-204ENST00000422713 THSD7BQ9C0I4 1608 aa16.67■□□□□ 0.26
TTC38-204ENST00000422713 ALDH1L1O75891 902 aa16.67■□□□□ 0.26
TTC38-204ENST00000422713 EGFRP00533 1210 aa16.67■□□□□ 0.26
TTC38-204ENST00000422713 VIL1P09327 827 aaKnown RBP16.67■□□□□ 0.26
TTC38-204ENST00000422713 VEGFBP49765 207 aa16.67■□□□□ 0.26
TTC38-204ENST00000422713 FOXO4P98177 505 aa16.67■□□□□ 0.26
TTC38-204ENST00000422713 RSBN1LQ6PCB5 846 aaPredicted RBP16.67■□□□□ 0.26
TTC38-204ENST00000422713 MRPL50Q8N5N7 158 aaKnown RBP16.67■□□□□ 0.26
TTC38-204ENST00000422713 C9orf78Q9NZ63 289 aaPredicted RBP16.67■□□□□ 0.26
TTC38-204ENST00000422713 PGAP2Q9UHJ9 254 aa16.67■□□□□ 0.26
TTC38-204ENST00000422713 KCNJ4P48050 445 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 CHRNDQ07001 517 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 IFIT5Q13325 482 aaKnown RBP16.66■□□□□ 0.26
TTC38-204ENST00000422713 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 EPHA10Q5JZY3 1008 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 LMBR1LQ6UX01 489 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 SSH1Q8WYL5 1049 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 CDCA7LQ96GN5 454 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 ANKRD2Q9GZV1 360 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 ZNF804BA4D1E1 1349 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 PTPRCP08575 1304 aa16.66■□□□□ 0.26
TTC38-204ENST00000422713 KLRK1P26718 216 aa16.65■□□□□ 0.26
TTC38-204ENST00000422713 RBM26Q5T8P6 1007 aaKnown RBP16.65■□□□□ 0.26
TTC38-204ENST00000422713 PAXIP1Q6ZW49 1069 aaPredicted RBP16.65■□□□□ 0.26
TTC38-204ENST00000422713 PODNQ7Z5L7 613 aa16.65■□□□□ 0.26
TTC38-204ENST00000422713 ZNF408Q9H9D4 720 aa16.65■□□□□ 0.26
TTC38-204ENST00000422713 LEMD3Q9Y2U8 911 aa16.65■□□□□ 0.26
TTC38-204ENST00000422713 USP17L3A6NCW0 530 aa16.64■□□□□ 0.25
TTC38-204ENST00000422713 USP17L4A6NCW7 530 aa16.64■□□□□ 0.25
TTC38-204ENST00000422713 CELF2O95319 508 aaKnown RBP16.64■□□□□ 0.25
TTC38-204ENST00000422713 DEFB115Q30KQ5 88 aa16.64■□□□□ 0.25
TTC38-204ENST00000422713 TAF7LQ5H9L4 462 aa16.64■□□□□ 0.25
TTC38-204ENST00000422713 CST9Q5W186 159 aa16.64■□□□□ 0.25
TTC38-204ENST00000422713 CDC37L1Q7L3B6 337 aa16.64■□□□□ 0.25
TTC38-204ENST00000422713 USP17L1Q7RTZ2 530 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms