RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
CDC42EP3-202ENST00000422687 KNDC1Q76NI1 1749 aa6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 KIF1AQ12756 1690 aa6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 DHX9Q08211 1270 aaKnown RBP6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 SCARF1Q14162 830 aa6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 KRT27Q7Z3Y8 459 aa6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 PRIMPOLQ96LW4 560 aa6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 RBM19Q9Y4C8 960 aaKnown RBP6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 FMN2Q9NZ56 1722 aa6.87□□□□□ -1.31
CDC42EP3-202ENST00000422687 NRXN1Q9ULB1 1477 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 DISP2A7MBM2 1401 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 YTHDC2Q9H6S0 1430 aaKnown RBP6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 ARHGEF10O15013 1369 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 BRWD3Q6RI45 1802 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 FAM83GA6ND36 823 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 E9PSI1 815 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 WASLO00401 505 aaPredicted RBP6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 SCTRP47872 440 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 PSME1Q06323 249 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 NFX1Q12986 1120 aaKnown RBP6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 SF3B2Q13435 895 aaKnown RBP6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 PPP1R26Q5T8A7 1209 aaPredicted RBP6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 PGPEP1Q9NXJ5 209 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 STK26Q9P289 416 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 NWD2Q9ULI1 1742 aa6.86□□□□□ -1.31
CDC42EP3-202ENST00000422687 TMEM229AB2RXF0 380 aa6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 ERVH48-1M5A8F1 160 aa6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 MYCP01106 439 aaPredicted RBP6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 TMEM132EQ6IEE7 984 aa6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 Q6ZVU0 165 aa6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 TSEN2Q8NCE0 465 aaKnown RBP6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 PURBQ96QR8 312 aaKnown RBP6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 C14orf93Q9H972 538 aaKnown RBP6.85□□□□□ -1.31
CDC42EP3-202ENST00000422687 ANKARQ7Z5J8 1434 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 UNCXA6NJT0 531 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 ICMTO60725 284 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 BAG6P46379 1132 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 MARSP56192 900 aaKnown RBP6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 ECM1Q16610 540 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 COL26A1Q96A83 441 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 TSEN34Q9BSV6 310 aaKnown RBP6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 ZNF358Q9NW07 568 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 IFT172Q9UG01 1749 aa6.84□□□□□ -1.31
CDC42EP3-202ENST00000422687 PLCH1Q4KWH8 1693 aa6.84□□□□□ -1.32
CDC42EP3-202ENST00000422687 SCNN1DP51172 638 aa6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 FKBP5Q13451 457 aaPredicted RBP6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 NPAS3Q8IXF0 933 aa6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 OSBPL3Q9H4L5 887 aa6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 ABCA3Q99758 1704 aa6.83□□□□□ -1.32
CDC42EP3-202ENST00000422687 SPATA31A5Q5VU36 1347 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 SPATA31A7Q8IWB4 1347 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 DLC1Q96QB1 1528 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 NRAPQ86VF7 1730 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 TERTO14746 1132 aaKnown RBP6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 WFS1O76024 890 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 UPP2O95045 317 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 IGFBP4P22692 258 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 EPHA4P54764 986 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 ZNF211Q13398 564 aaPredicted RBP6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 RGL3Q3MIN7 710 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 PPARGC1BQ86YN6 1023 aaKnown RBP6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 NPAS4Q8IUM7 802 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 HINFPQ9BQA5 517 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 SEPT3Q9UH03 358 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 ADGRB2O60241 1585 aa6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 DHX57Q6P158 1386 aaKnown RBP6.82□□□□□ -1.32
CDC42EP3-202ENST00000422687 THSD7AQ9UPZ6 1657 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 H3BRB1 525 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 C21orf2O43822 256 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 PTCD1O75127 700 aaKnown RBP6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 RAB15P59190 212 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 GTF3C2Q8WUA4 911 aaPredicted RBP6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 PRAM1Q96QH2 718 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 CAMKK2Q96RR4 588 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 MPHOSPH9Q99550 1183 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 TUT1Q9H6E5 874 aaKnown RBP6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 IGSF5Q9NSI5 407 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 BTG4Q9NY30 223 aa6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 NXF1Q9UBU9 619 aaKnown RBP6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 DNMT3AQ9Y6K1 912 aaPredicted RBP6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 TRPM3Q9HCF6 1732 aaPredicted RBP6.81□□□□□ -1.32
CDC42EP3-202ENST00000422687 PRR36Q9H6K5 1346 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 ADGRB1O14514 1584 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 LGR5O75473 907 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 ABL1P00519 1130 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 R3HDM1Q15032 1099 aaKnown RBP6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 C6orf118Q5T5N4 469 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 BIN2Q9UBW5 565 aaPredicted RBP6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 ALS2Q96Q42 1657 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 PARD3Q8TEW0 1356 aa6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 COL14A1Q05707 1796 aaKnown RBP6.8□□□□□ -1.32
CDC42EP3-202ENST00000422687 SPATA31A1Q5TZJ5 1347 aa6.79□□□□□ -1.32
CDC42EP3-202ENST00000422687 RGPD1P0DJD0 1748 aa6.79□□□□□ -1.32
CDC42EP3-202ENST00000422687 UTRNP46939 3433 aa6.79□□□□□ -1.32
CDC42EP3-202ENST00000422687 SPINT1O43278 529 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms