RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 ANKRD2Q9GZV1 360 aa10.96□□□□□ -0.65
MDC1-204ENST00000422266 LEMD3Q9Y2U8 911 aa10.96□□□□□ -0.65
MDC1-204ENST00000422266 ANKRD18BA2A2Z9 1011 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 RIMBP2O15034 1052 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 ECE2O60344 883 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 RAD17O75943 681 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 ITGBL1O95965 494 aaPredicted RBP10.95□□□□□ -0.66
MDC1-204ENST00000422266 CSF1RP07333 972 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 POTEIP0CG38 1075 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 POTEJP0CG39 1038 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 ITGA6P23229 1130 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 EPS15P42566 896 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 GMPSP49915 693 aaPredicted RBP10.95□□□□□ -0.66
MDC1-204ENST00000422266 BEND3Q5T5X7 828 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 PODNQ7Z5L7 613 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 GREM2Q9H772 168 aa10.95□□□□□ -0.66
MDC1-204ENST00000422266 SPINK5Q9NQ38 1064 aaPredicted RBP10.95□□□□□ -0.66
MDC1-204ENST00000422266 C9orf78Q9NZ63 289 aaPredicted RBP10.95□□□□□ -0.66
MDC1-204ENST00000422266 GRM8O00222 908 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 IFIT5Q13325 482 aaKnown RBP10.94□□□□□ -0.66
MDC1-204ENST00000422266 ALDH1L2Q3SY69 923 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 MAP1SQ66K74 1059 aaPredicted RBP10.94□□□□□ -0.66
MDC1-204ENST00000422266 AGBL3Q8NEM8 1001 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 CCDC85AQ96PX6 553 aaPredicted RBP10.94□□□□□ -0.66
MDC1-204ENST00000422266 SRCIN1Q9C0H9 1055 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 DBNDD1Q9H9R9 158 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 CNOT7Q9UIV1 285 aaKnown RBP10.94□□□□□ -0.66
MDC1-204ENST00000422266 COL4A5P29400 1685 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 MYH3P11055 1940 aa10.94□□□□□ -0.66
MDC1-204ENST00000422266 MED23Q9ULK4 1368 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 YDJCA8MPS7 323 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 PSMD14O00487 310 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 VIL1P09327 827 aaKnown RBP10.93□□□□□ -0.66
MDC1-204ENST00000422266 CASP7P55210 303 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 SLFN5Q08AF3 891 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 CCDC57Q2TAC2 916 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 TAF7LQ5H9L4 462 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 SLC4A10Q6U841 1118 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 MICALL2Q8IY33 904 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 JARID2Q92833 1246 aaPredicted RBP10.93□□□□□ -0.66
MDC1-204ENST00000422266 PGAP2Q9UHJ9 254 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 MINPP1Q9UNW1 487 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 HDAC5Q9UQL6 1122 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 DUOX1Q9NRD9 1551 aa10.93□□□□□ -0.66
MDC1-204ENST00000422266 MYO3BQ8WXR4 1341 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 F6X3S4 739 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 KCNJ4P48050 445 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 CCT4P50991 539 aaKnown RBP10.92□□□□□ -0.66
MDC1-204ENST00000422266 HTRA3P83110 453 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 DOK7Q18PE1 504 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 CDC37L1Q7L3B6 337 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 COA1Q9GZY4 146 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 ADAMTSL1Q8N6G6 1762 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 ZNF609O15014 1411 aa10.92□□□□□ -0.66
MDC1-204ENST00000422266 TAF1P21675 1872 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 CNTNAP1P78357 1384 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 USP17L3A6NCW0 530 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 USP17L4A6NCW7 530 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 ECE1P42892 770 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 DEFB115Q30KQ5 88 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 FAM161AQ3B820 660 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 USP17L1Q7RTZ2 530 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 SLC51AQ86UW1 340 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 OGFOD1Q8N543 542 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 DCPSQ96C86 337 aaKnown RBP10.91□□□□□ -0.66
MDC1-204ENST00000422266 ABT1Q9ULW3 272 aaKnown RBP10.91□□□□□ -0.66
MDC1-204ENST00000422266 CHMP3Q9Y3E7 222 aa10.91□□□□□ -0.66
MDC1-204ENST00000422266 ZNF804BA4D1E1 1349 aa10.9□□□□□ -0.66
MDC1-204ENST00000422266 LTBP1Q14766 1721 aa10.9□□□□□ -0.66
MDC1-204ENST00000422266 RASSF10A6NK89 507 aa10.9□□□□□ -0.66
MDC1-204ENST00000422266 RSBN1LQ6PCB5 846 aaPredicted RBP10.9□□□□□ -0.66
MDC1-204ENST00000422266 MRPL50Q8N5N7 158 aaKnown RBP10.9□□□□□ -0.66
MDC1-204ENST00000422266 FOXO4P98177 505 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 STRIP1Q5VSL9 837 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 LMBR1LQ6UX01 489 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 LDHAL6AQ6ZMR3 332 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 AIDAQ96BJ3 306 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 HHIPL1Q96JK4 782 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 SMC4Q9NTJ3 1288 aa10.89□□□□□ -0.67
MDC1-204ENST00000422266 MKRN1Q9UHC7 482 aaKnown RBP10.89□□□□□ -0.67
MDC1-204ENST00000422266 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
MDC1-204ENST00000422266 UTYO14607 1347 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 USP17L8P0C7I0 530 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 BRPF1P55201 1214 aaPredicted RBP10.88□□□□□ -0.67
MDC1-204ENST00000422266 MAP2K1Q02750 393 aaPredicted RBP10.88□□□□□ -0.67
MDC1-204ENST00000422266 CHRNDQ07001 517 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 KIF4BQ2VIQ3 1234 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 C15orf52Q6ZUT6 534 aaKnown RBP10.88□□□□□ -0.67
MDC1-204ENST00000422266 ZNF804AQ7Z570 1209 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 SULF1Q8IWU6 871 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 TRMT2AQ8IZ69 625 aaKnown RBP10.88□□□□□ -0.67
MDC1-204ENST00000422266 SSH1Q8WYL5 1049 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 CNNM1Q9NRU3 951 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 HDAC9Q9UKV0 1011 aa10.88□□□□□ -0.67
MDC1-204ENST00000422266 CELF2O95319 508 aaKnown RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 HSPA1AP0DMV8 641 aaKnown RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 HSPA1BP0DMV9 641 aaKnown RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 ZNF280AP59817 542 aaPredicted RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 TBC1D10BQ4KMP7 808 aaPredicted RBP10.87□□□□□ -0.67
MDC1-204ENST00000422266 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 419.9 ms