RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RETREG2Q8NC44 543 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 EDEM1Q92611 657 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 PLD4Q96BZ4 506 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 SMG9Q9H0W8 520 aaKnown RBP8.03□□□□□ -1.12
LINC00397-201ENST00000422074 GGNBP2Q9H3C7 697 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 ELP3Q9H9T3 547 aa8.03□□□□□ -1.12
LINC00397-201ENST00000422074 FAM229AH3BQW9 127 aa8.02□□□□□ -1.13
LINC00397-201ENST00000422074 J3QW42 95 aa8.02□□□□□ -1.13
LINC00397-201ENST00000422074 ELNP15502 786 aa8.02□□□□□ -1.13
LINC00397-201ENST00000422074 EIF2AK2P19525 551 aaKnown RBP8.02□□□□□ -1.13
LINC00397-201ENST00000422074 BAG6P46379 1132 aa8.02□□□□□ -1.13
LINC00397-201ENST00000422074 TTC39BQ5VTQ0 682 aaPredicted RBP8.02□□□□□ -1.13
LINC00397-201ENST00000422074 FZD6O60353 706 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 GHRHP01286 108 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 PCSK2P16519 638 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 RAC1P63000 192 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 DNM1Q05193 864 aaKnown RBP8.01□□□□□ -1.13
LINC00397-201ENST00000422074 HYAL2Q12891 473 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 ECM1Q16610 540 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 COL13A1Q5TAT6 717 aaPredicted RBP8.01□□□□□ -1.13
LINC00397-201ENST00000422074 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
LINC00397-201ENST00000422074 FMR1NBQ8N0W7 255 aaPredicted RBP8.01□□□□□ -1.13
LINC00397-201ENST00000422074 CACTIN-AS1Q8N1I8 211 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 NSUN5Q96P11 429 aaKnown RBP8.01□□□□□ -1.13
LINC00397-201ENST00000422074 NACC1Q96RE7 527 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 TMEM63CQ9P1W3 806 aa8.01□□□□□ -1.13
LINC00397-201ENST00000422074 ICMTO60725 284 aa8□□□□□ -1.13
LINC00397-201ENST00000422074 APBA3O96018 575 aa8□□□□□ -1.13
LINC00397-201ENST00000422074 ZNF438Q7Z4V0 828 aa8□□□□□ -1.13
LINC00397-201ENST00000422074 TXNDC2Q86VQ3 553 aa8□□□□□ -1.13
LINC00397-201ENST00000422074 FBXO11Q86XK2 927 aa8□□□□□ -1.13
LINC00397-201ENST00000422074 RBSNQ9H1K0 784 aa8□□□□□ -1.13
LINC00397-201ENST00000422074 C9orf172C9J069 976 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 SELPP16109 830 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 USP5P45974 858 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 GRIK4Q16099 956 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 WFDC8Q8IUA0 241 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 CEP120Q8N960 986 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 LENG1Q96BZ8 264 aaPredicted RBP7.99□□□□□ -1.13
LINC00397-201ENST00000422074 CNTN3Q9P232 1028 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 POLIQ9UNA4 740 aa7.99□□□□□ -1.13
LINC00397-201ENST00000422074 CYP2E1P05181 493 aaPredicted RBP7.98□□□□□ -1.13
LINC00397-201ENST00000422074 ZNF211Q13398 564 aaPredicted RBP7.98□□□□□ -1.13
LINC00397-201ENST00000422074 SALL4Q9UJQ4 1053 aa7.98□□□□□ -1.13
LINC00397-201ENST00000422074 ABL1P00519 1130 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 GATA4P43694 442 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 EHHADHQ08426 723 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 ADGRE1Q14246 886 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 GJD3Q8N144 294 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 PMEPA1Q969W9 287 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 CHRDQ9H2X0 955 aa7.97□□□□□ -1.13
LINC00397-201ENST00000422074 SRA1Q9HD15 236 aaKnown RBP7.97□□□□□ -1.13
LINC00397-201ENST00000422074 DEAF1O75398 565 aaPredicted RBP7.96□□□□□ -1.14
LINC00397-201ENST00000422074 NRG1Q02297 640 aaPredicted RBP7.96□□□□□ -1.14
LINC00397-201ENST00000422074 SUZ12Q15022 739 aaKnown RBP7.96□□□□□ -1.14
LINC00397-201ENST00000422074 C1orf127Q8N9H9 656 aa7.96□□□□□ -1.14
LINC00397-201ENST00000422074 ANO2Q9NQ90 1003 aa7.96□□□□□ -1.14
LINC00397-201ENST00000422074 TRIM33Q9UPN9 1127 aa7.96□□□□□ -1.14
LINC00397-201ENST00000422074 SERPINB4P48594 390 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 ARHGAP4P98171 946 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 C8orf34Q49A92 452 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 MAP4K3Q8IVH8 894 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 IL22RA1Q8N6P7 574 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 SPACA7Q96KW9 195 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 PBX4Q9BYU1 374 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 MUC3BQ9H195 1237 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 CCDC87Q9NVE4 849 aa7.95□□□□□ -1.14
LINC00397-201ENST00000422074 A6NHS1 94 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 DLL1O00548 723 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 ADAM23O75077 832 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 ATP11AP98196 1134 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 MBTPS1Q14703 1052 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 IGF2-ASQ6U949 168 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 TTC16Q8NEE8 873 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
LINC00397-201ENST00000422074 GNEQ9Y223 722 aaKnown RBP7.94□□□□□ -1.14
LINC00397-201ENST00000422074 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.94□□□□□ -1.14
LINC00397-201ENST00000422074 NFKBIEO00221 500 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 TNFRSF21O75509 655 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 SMNDC1O75940 238 aaKnown RBP eCLIP7.93□□□□□ -1.14
LINC00397-201ENST00000422074 CES1P23141 567 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 AAMPQ13685 434 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 SETDB1Q15047 1291 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 GDF6Q6KF10 455 aaPredicted RBP7.93□□□□□ -1.14
LINC00397-201ENST00000422074 SHISA2Q6UWI4 295 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 ADAM19Q9H013 955 aa7.93□□□□□ -1.14
LINC00397-201ENST00000422074 H3BRB1 525 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 TM4SF5O14894 197 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 CEP135Q66GS9 1140 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 ADAMTSL4Q6UY14 1074 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 NCAPG2Q86XI2 1143 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 SNX29Q8TEQ0 813 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 TUT1Q9H6E5 874 aaKnown RBP7.92□□□□□ -1.14
LINC00397-201ENST00000422074 DZANK1Q9NVP4 752 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 KANSL3Q9P2N6 904 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 PPME1Q9Y570 386 aa7.92□□□□□ -1.14
LINC00397-201ENST00000422074 BRD1O95696 1058 aa7.91□□□□□ -1.14
LINC00397-201ENST00000422074 TXNRD3Q86VQ6 643 aa7.91□□□□□ -1.14
LINC00397-201ENST00000422074 GLYCTKQ8IVS8 523 aa7.91□□□□□ -1.14
LINC00397-201ENST00000422074 CCER1Q8TC90 406 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 136 ms