RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 IFT43Q96FT9 208 aa8.98□□□□□ -0.97
SFXN1-202ENST00000421887 DMGDHQ9UI17 866 aaKnown RBP8.98□□□□□ -0.97
SFXN1-202ENST00000421887 RAXQ9Y2V3 346 aa8.98□□□□□ -0.97
SFXN1-202ENST00000421887 GSC2O15499 205 aa8.97□□□□□ -0.97
SFXN1-202ENST00000421887 IGLV1-40P01703 118 aa8.97□□□□□ -0.97
SFXN1-202ENST00000421887 IDH3AP50213 366 aa8.97□□□□□ -0.97
SFXN1-202ENST00000421887 FZD5Q13467 585 aa8.97□□□□□ -0.97
SFXN1-202ENST00000421887 LCE1DQ5T752 114 aa8.97□□□□□ -0.97
SFXN1-202ENST00000421887 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
SFXN1-202ENST00000421887 AGGF1Q8N302 714 aaeCLIP8.97□□□□□ -0.97
SFXN1-202ENST00000421887 CEP170Q5SW79 1584 aa8.97□□□□□ -0.97
SFXN1-202ENST00000421887 TSPOAP1O95153 1857 aa8.96□□□□□ -0.97
SFXN1-202ENST00000421887 RASA1P20936 1047 aa8.96□□□□□ -0.98
SFXN1-202ENST00000421887 SIX5Q8N196 739 aa8.96□□□□□ -0.98
SFXN1-202ENST00000421887 GAS2L2Q8NHY3 880 aa8.96□□□□□ -0.98
SFXN1-202ENST00000421887 KRTAP4-7Q9BYR0 210 aa8.96□□□□□ -0.98
SFXN1-202ENST00000421887 STOML1Q9UBI4 398 aa8.96□□□□□ -0.98
SFXN1-202ENST00000421887 KIAA1324LA8MWY0 1029 aaPredicted RBP8.95□□□□□ -0.98
SFXN1-202ENST00000421887 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
SFXN1-202ENST00000421887 INPP5BP32019 993 aa8.95□□□□□ -0.98
SFXN1-202ENST00000421887 IL22RA1Q8N6P7 574 aa8.95□□□□□ -0.98
SFXN1-202ENST00000421887 KLK14Q9P0G3 267 aa8.95□□□□□ -0.98
SFXN1-202ENST00000421887 ABCC10Q5T3U5 1492 aa8.95□□□□□ -0.98
SFXN1-202ENST00000421887 LGR5O75473 907 aa8.94□□□□□ -0.98
SFXN1-202ENST00000421887 PLD4Q96BZ4 506 aa8.94□□□□□ -0.98
SFXN1-202ENST00000421887 HINFPQ9BQA5 517 aa8.94□□□□□ -0.98
SFXN1-202ENST00000421887 GRIN2AQ12879 1464 aa8.94□□□□□ -0.98
SFXN1-202ENST00000421887 J3QW42 95 aa8.93□□□□□ -0.98
SFXN1-202ENST00000421887 ATP9BO43861 1147 aa8.92□□□□□ -0.98
SFXN1-202ENST00000421887 ARSDP51689 593 aa8.92□□□□□ -0.98
SFXN1-202ENST00000421887 NRLP54845 237 aa8.92□□□□□ -0.98
SFXN1-202ENST00000421887 SHROOM2Q13796 1616 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 DIP2BQ9P265 1576 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 HECW2Q9P2P5 1572 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 DHX15O43143 795 aaKnown RBP8.91□□□□□ -0.98
SFXN1-202ENST00000421887 ADAMTS4O75173 837 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 DKK1O94907 266 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 GRIK1P39086 918 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 SEC13P55735 322 aa8.91□□□□□ -0.98
SFXN1-202ENST00000421887 UBL7Q96S82 380 aaPredicted RBP8.91□□□□□ -0.98
SFXN1-202ENST00000421887 CUX1P39880 1505 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 POM121CA8CG34 1229 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 GHRHP01286 108 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 DGKZQ13574 1117 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 SETDB1Q15047 1291 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 Q6ZS46 218 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 ADAMTS19Q8TE59 1207 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 UCN2Q96RP3 112 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 TLR7Q9NYK1 1049 aaKnown RBP8.9□□□□□ -0.98
SFXN1-202ENST00000421887 USP20Q9Y2K6 914 aa8.9□□□□□ -0.98
SFXN1-202ENST00000421887 ABCA5Q8WWZ7 1642 aa8.9□□□□□ -0.99
SFXN1-202ENST00000421887 MAPKBP1O60336 1514 aa8.9□□□□□ -0.99
SFXN1-202ENST00000421887 LOC102724428A0A0B4J2F2 783 aa8.89□□□□□ -0.99
SFXN1-202ENST00000421887 SIK1P57059 783 aa8.89□□□□□ -0.99
SFXN1-202ENST00000421887 ZDHHC13Q8IUH4 622 aa8.89□□□□□ -0.99
SFXN1-202ENST00000421887 FBXO41Q8TF61 875 aa8.89□□□□□ -0.99
SFXN1-202ENST00000421887 POM121Q96HA1 1249 aa8.89□□□□□ -0.99
SFXN1-202ENST00000421887 NSUN5Q96P11 429 aaKnown RBP8.89□□□□□ -0.99
SFXN1-202ENST00000421887 SRA1Q9HD15 236 aaKnown RBP8.89□□□□□ -0.99
SFXN1-202ENST00000421887 ADGRL1O94910 1474 aa8.89□□□□□ -0.99
SFXN1-202ENST00000421887 NUP160Q12769 1436 aa8.88□□□□□ -0.99
SFXN1-202ENST00000421887 MICAL2O94851 1124 aa8.88□□□□□ -0.99
SFXN1-202ENST00000421887 NFIAQ12857 509 aa8.88□□□□□ -0.99
SFXN1-202ENST00000421887 HDGFL1Q5TGJ6 251 aa8.88□□□□□ -0.99
SFXN1-202ENST00000421887 INTS5Q6P9B9 1019 aaKnown RBP8.88□□□□□ -0.99
SFXN1-202ENST00000421887 MAP4K3Q8IVH8 894 aa8.88□□□□□ -0.99
SFXN1-202ENST00000421887 RBSNQ9H1K0 784 aa8.88□□□□□ -0.99
SFXN1-202ENST00000421887 PRG4Q92954 1404 aaPredicted RBP8.88□□□□□ -0.99
SFXN1-202ENST00000421887 ABCA10Q8WWZ4 1543 aa8.87□□□□□ -0.99
SFXN1-202ENST00000421887 PSAPP07602 524 aa8.87□□□□□ -0.99
SFXN1-202ENST00000421887 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.87□□□□□ -0.99
SFXN1-202ENST00000421887 C11orf16Q9NQ32 467 aa8.87□□□□□ -0.99
SFXN1-202ENST00000421887 ADAMTS12P58397 1594 aa8.86□□□□□ -0.99
SFXN1-202ENST00000421887 WNT11O96014 354 aa8.86□□□□□ -0.99
SFXN1-202ENST00000421887 SPINK2P20155 84 aa8.86□□□□□ -0.99
SFXN1-202ENST00000421887 ARMC10Q8N2F6 343 aa8.86□□□□□ -0.99
SFXN1-202ENST00000421887 RTCBQ9Y3I0 505 aaKnown RBP8.86□□□□□ -0.99
SFXN1-202ENST00000421887 XYLBO75191 536 aa8.85□□□□□ -0.99
SFXN1-202ENST00000421887 TRIM42Q8IWZ5 723 aa8.85□□□□□ -0.99
SFXN1-202ENST00000421887 CMTR1Q8N1G2 835 aaKnown RBP8.85□□□□□ -0.99
SFXN1-202ENST00000421887 UTP4Q969X6 686 aaKnown RBP8.85□□□□□ -0.99
SFXN1-202ENST00000421887 CEP41Q9BYV8 373 aa8.85□□□□□ -0.99
SFXN1-202ENST00000421887 TRIM33Q9UPN9 1127 aa8.85□□□□□ -0.99
SFXN1-202ENST00000421887 HMX2A2RU54 273 aa8.84□□□□□ -0.99
SFXN1-202ENST00000421887 RAD21O60216 631 aa8.84□□□□□ -0.99
SFXN1-202ENST00000421887 IGFBP4P22692 258 aa8.84□□□□□ -0.99
SFXN1-202ENST00000421887 ACAD11Q709F0 780 aa8.84□□□□□ -0.99
SFXN1-202ENST00000421887 C7orf69Q9H7B7 122 aa8.84□□□□□ -0.99
SFXN1-202ENST00000421887 PPME1Q9Y570 386 aa8.84□□□□□ -0.99
SFXN1-202ENST00000421887 FHAD1B1AJZ9 1412 aa8.83□□□□□ -1
SFXN1-202ENST00000421887 MMP20O60882 483 aa8.83□□□□□ -1
SFXN1-202ENST00000421887 WISP1O95388 367 aa8.83□□□□□ -1
SFXN1-202ENST00000421887 DTX1Q86Y01 620 aa8.83□□□□□ -1
SFXN1-202ENST00000421887 RGL4Q8IZJ4 473 aa8.83□□□□□ -1
SFXN1-202ENST00000421887 GALNT11Q8NCW6 608 aa8.83□□□□□ -1
SFXN1-202ENST00000421887 LINC01387J3KSC0 135 aa8.82□□□□□ -1
SFXN1-202ENST00000421887 C11orf91Q3C1V1 193 aa8.82□□□□□ -1
SFXN1-202ENST00000421887 RNF43Q68DV7 783 aa8.82□□□□□ -1
SFXN1-202ENST00000421887 TXNDC11Q6PKC3 985 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms