RNA–Protein interactions for RNA: ENST00000420995.6

TRIM13-204, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 2,607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-204ENST00000420995 DDX46Q7L014 1031 aaKnown RBP18.71■□□□□ 0.59
TRIM13-204ENST00000420995 ZHX1Q9UKY1 873 aaPredicted RBP18.71■□□□□ 0.59
TRIM13-204ENST00000420995 OVOS2A0A0G2JMS6 1433 aa18.71■□□□□ 0.59
TRIM13-204ENST00000420995 MRC1P22897 1456 aa18.71■□□□□ 0.59
TRIM13-204ENST00000420995 FGD1P98174 961 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 STOX1Q6ZVD7 989 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.7■□□□□ 0.58
TRIM13-204ENST00000420995 DBNDD2Q9BQY9 259 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 TNNT1P13805 278 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
TRIM13-204ENST00000420995 NCBP1Q09161 790 aaKnown RBP18.7■□□□□ 0.58
TRIM13-204ENST00000420995 SLFNL1Q499Z3 407 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 DMTNQ08495 405 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 ARID5BQ14865 1188 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 COPRSQ9NQ92 184 aa18.7■□□□□ 0.58
TRIM13-204ENST00000420995 RFX5P48382 616 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-204ENST00000420995 METTL22Q9BUU2 404 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-204ENST00000420995 ADD1P35611 737 aaKnown RBP18.69■□□□□ 0.58
TRIM13-204ENST00000420995 IQCB1Q15051 598 aa18.69■□□□□ 0.58
TRIM13-204ENST00000420995 UBE3BQ7Z3V4 1068 aa18.69■□□□□ 0.58
TRIM13-204ENST00000420995 GOLPH3LQ9H4A5 285 aa18.69■□□□□ 0.58
TRIM13-204ENST00000420995 ZSCAN16Q9H4T2 348 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-204ENST00000420995 CFAP45Q9UL16 551 aa18.69■□□□□ 0.58
TRIM13-204ENST00000420995 U3KPZ7 1027 aaPredicted RBP18.69■□□□□ 0.58
TRIM13-204ENST00000420995 NAA30Q147X3 362 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-204ENST00000420995 BCL11BQ9C0K0 894 aaPredicted RBP18.68■□□□□ 0.58
TRIM13-204ENST00000420995 MCMDC2Q4G0Z9 681 aa18.68■□□□□ 0.58
TRIM13-204ENST00000420995 ZNF142P52746 1687 aaPredicted RBP18.67■□□□□ 0.58
TRIM13-204ENST00000420995 GOLGA6L19H0YKK7 550 aa18.67■□□□□ 0.58
TRIM13-204ENST00000420995 TPD52L1Q16890 204 aaPredicted RBP18.67■□□□□ 0.58
TRIM13-204ENST00000420995 CCAR1Q8IX12 1150 aaKnown RBP18.67■□□□□ 0.58
TRIM13-204ENST00000420995 NSUN7Q8NE18 718 aaKnown RBP18.67■□□□□ 0.58
TRIM13-204ENST00000420995 SMARCC2Q8TAQ2 1214 aa18.67■□□□□ 0.58
TRIM13-204ENST00000420995 SMTNL1A8MU46 457 aa18.67■□□□□ 0.58
TRIM13-204ENST00000420995 CTDNEP1O95476 244 aa18.67■□□□□ 0.58
TRIM13-204ENST00000420995 APOBRQ0VD83 1088 aa18.67■□□□□ 0.58
TRIM13-204ENST00000420995 ERCC4Q92889 916 aaPredicted RBP18.67■□□□□ 0.58
TRIM13-204ENST00000420995 A0A0G2JLW4 131 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 PTPDC1A2A3K4 754 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 ATP5J2-PTCD1G3V325 749 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 PTCD1O75127 700 aaKnown RBP18.66■□□□□ 0.58
TRIM13-204ENST00000420995 CCT2P78371 535 aaKnown RBP18.66■□□□□ 0.58
TRIM13-204ENST00000420995 ANKRD13DQ6ZTN6 518 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 ZNF496Q96IT1 587 aaPredicted RBP18.66■□□□□ 0.58
TRIM13-204ENST00000420995 PHRF1Q9P1Y6 1649 aaKnown RBP18.66■□□□□ 0.58
TRIM13-204ENST00000420995 USP27XA6NNY8 438 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 HAUS7Q99871 368 aa18.66■□□□□ 0.58
TRIM13-204ENST00000420995 NCOA5Q9HCD5 579 aaKnown RBP18.66■□□□□ 0.58
TRIM13-204ENST00000420995 PFKFB2O60825 505 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 GUCY1B3Q02153 619 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 ZNF592Q92610 1267 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 LRRC8AQ8IWT6 810 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 FBXW7Q969H0 707 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 SLC52A2Q9HAB3 445 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 NAP1L2Q9ULW6 460 aaPredicted RBP18.65■□□□□ 0.58
TRIM13-204ENST00000420995 USP16Q9Y5T5 823 aa18.65■□□□□ 0.58
TRIM13-204ENST00000420995 SIPA1L3O60292 1781 aaPredicted RBP18.64■□□□□ 0.58
TRIM13-204ENST00000420995 SNW1Q13573 536 aaKnown RBP18.64■□□□□ 0.57
TRIM13-204ENST00000420995 STX1AQ16623 288 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 C5P01031 1676 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 CAVIN2O95810 425 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 CDC25BP30305 580 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 UTP14CQ5TAP6 766 aaKnown RBP18.64■□□□□ 0.57
TRIM13-204ENST00000420995 SARM1Q6SZW1 724 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 LRP10Q7Z4F1 713 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 CCDC112Q8NEF3 446 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 RCOR1Q9UKL0 485 aa18.64■□□□□ 0.57
TRIM13-204ENST00000420995 KDM6AO15550 1401 aaPredicted RBP18.64■□□□□ 0.57
TRIM13-204ENST00000420995 DHX32Q7L7V1 743 aaKnown RBP18.63■□□□□ 0.57
TRIM13-204ENST00000420995 FILIP1Q7Z7B0 1213 aa18.63■□□□□ 0.57
TRIM13-204ENST00000420995 GOLIM4O00461 696 aa18.63■□□□□ 0.57
TRIM13-204ENST00000420995 NAA16Q6N069 864 aaPredicted RBP18.63■□□□□ 0.57
TRIM13-204ENST00000420995 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
TRIM13-204ENST00000420995 KBTBD3Q8NAB2 608 aa18.63■□□□□ 0.57
TRIM13-204ENST00000420995 LLPHQ9BRT6 129 aaKnown RBP18.63■□□□□ 0.57
TRIM13-204ENST00000420995 RFX7Q2KHR2 1363 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 A0A087WZG4 1122 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 BECN2A8MW95 431 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 RABL6Q3YEC7 729 aaPredicted RBP18.62■□□□□ 0.57
TRIM13-204ENST00000420995 CCDC73Q6ZRK6 1079 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 DHX40Q8IX18 779 aaKnown RBP18.62■□□□□ 0.57
TRIM13-204ENST00000420995 ADAMTSL3P82987 1691 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 CEP135Q66GS9 1140 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 MRFAP1L1Q96HT8 127 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 ERBB3P21860 1342 aa18.62■□□□□ 0.57
TRIM13-204ENST00000420995 KINO60870 393 aaKnown RBP18.61■□□□□ 0.57
TRIM13-204ENST00000420995 ME1P48163 572 aa18.61■□□□□ 0.57
TRIM13-204ENST00000420995 ZC3H6P61129 1189 aaKnown RBP18.61■□□□□ 0.57
TRIM13-204ENST00000420995 ILDR1Q86SU0 546 aaPredicted RBP18.61■□□□□ 0.57
TRIM13-204ENST00000420995 PAXBP1Q9Y5B6 917 aa18.61■□□□□ 0.57
TRIM13-204ENST00000420995 SKILP12757 684 aa18.61■□□□□ 0.57
TRIM13-204ENST00000420995 NEUROD6Q96NK8 337 aa18.61■□□□□ 0.57
TRIM13-204ENST00000420995 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
TRIM13-204ENST00000420995 CTAGE5O15320 804 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 FSIP1Q8NA03 581 aa18.6■□□□□ 0.57
TRIM13-204ENST00000420995 ENGASEQ8NFI3 743 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms