RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 ECHDC1Q9NTX5 307 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 SPTLC3Q9NUV7 552 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 KIF3AQ9Y496 699 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 UBN2Q6ZU65 1347 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 GLRX3O76003 335 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 EAF2Q96CJ1 260 aaPredicted RBP17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 TMEM63CQ9P1W3 806 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 BTAF1O14981 1849 aa17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 PARP10Q53GL7 1025 aa17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 SUSD4Q5VX71 490 aa17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 CNTROBQ8N137 903 aa17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 PLA2G12BQ9BX93 195 aa17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 DIAPH3Q9NSV4 1193 aa17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 RTCBQ9Y3I0 505 aaKnown RBP17.62■□□□□ 0.41
SEMA4D-204ENST00000420101 SYCE3A1L190 88 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 PDE8AO60658 829 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 TRIM37O94972 964 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 RC3H1Q5TC82 1133 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 SMIM5Q71RC9 77 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 PI4K2BQ8TCG2 481 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 SH3TC1Q8TE82 1336 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 ZPR1O75312 459 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 RPS6KA4O75676 772 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 IL15P40933 162 aaPredicted RBP17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 CTSWP56202 376 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 DNTTIP2Q5QJE6 756 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 BICDL1Q6ZP65 573 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 INTS4Q96HW7 963 aaKnown RBP17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 AK7Q96M32 723 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 FEZ1Q99689 392 aa17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.61■□□□□ 0.41
SEMA4D-204ENST00000420101 EYA2O00167 538 aa17.6■□□□□ 0.41
SEMA4D-204ENST00000420101 FGD1P98174 961 aa17.6■□□□□ 0.41
SEMA4D-204ENST00000420101 NOLC1Q14978 699 aaKnown RBP eCLIP17.6■□□□□ 0.41
SEMA4D-204ENST00000420101 TNNI3KQ59H18 835 aa17.6■□□□□ 0.41
SEMA4D-204ENST00000420101 FPGT-TNNI3KV9GXZ4 949 aa17.6■□□□□ 0.41
SEMA4D-204ENST00000420101 CICQ96RK0 1608 aaPredicted RBP17.6■□□□□ 0.41
SEMA4D-204ENST00000420101 ANKRD18BA2A2Z9 1011 aa17.59■□□□□ 0.41
SEMA4D-204ENST00000420101 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
SEMA4D-204ENST00000420101 CLEC4GQ6UXB4 293 aa17.59■□□□□ 0.41
SEMA4D-204ENST00000420101 NEUROD6Q96NK8 337 aa17.59■□□□□ 0.41
SEMA4D-204ENST00000420101 TLR7Q9NYK1 1049 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-204ENST00000420101 USP42Q9H9J4 1324 aaKnown RBP17.59■□□□□ 0.41
SEMA4D-204ENST00000420101 CSF1RP07333 972 aa17.58■□□□□ 0.41
SEMA4D-204ENST00000420101 HCLS1P14317 486 aaPredicted RBP17.58■□□□□ 0.41
SEMA4D-204ENST00000420101 ITGA6P23229 1130 aa17.58■□□□□ 0.41
SEMA4D-204ENST00000420101 SYCP1Q15431 976 aa17.58■□□□□ 0.41
SEMA4D-204ENST00000420101 TTLL11Q8NHH1 800 aa17.58■□□□□ 0.41
SEMA4D-204ENST00000420101 HSP90B1P14625 803 aaKnown RBP17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 RXRBP28702 533 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 GTF2E1P29083 439 aaPredicted RBP17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 CHAF1AQ13111 956 aaPredicted RBP17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 USPL1Q5W0Q7 1092 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 PUS3Q9BZE2 481 aaKnown RBP17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 GREM2Q9H772 168 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 CEP126Q9P2H0 1117 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 ZDHHC9Q9Y397 364 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 MYH14Q7Z406 1995 aaKnown RBP17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 NUP98P52948 1817 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 RREB1Q92766 1687 aa17.58■□□□□ 0.4
SEMA4D-204ENST00000420101 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
SEMA4D-204ENST00000420101 CIAO1O76071 339 aa17.57■□□□□ 0.4
SEMA4D-204ENST00000420101 BRD1O95696 1058 aa17.57■□□□□ 0.4
SEMA4D-204ENST00000420101 ATG9AQ7Z3C6 839 aa17.57■□□□□ 0.4
SEMA4D-204ENST00000420101 BOLA2Q9H3K6 86 aa17.57■□□□□ 0.4
SEMA4D-204ENST00000420101 ZNF831Q5JPB2 1677 aa17.57■□□□□ 0.4
SEMA4D-204ENST00000420101 ANKRD36CQ5JPF3 1778 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 CNNM1Q9NRU3 951 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 SRP68Q9UHB9 627 aaKnown RBP17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 NARFQ9UHQ1 456 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 EPB41L2O43491 1005 aaKnown RBP17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 CHMLP26374 656 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 RFC4P35249 363 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 TRAPPC3LQ5T215 181 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 LDHAL6AQ6ZMR3 332 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 PDCL2Q8N4E4 241 aa17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 RBM27Q9P2N5 1060 aaKnown RBP17.56■□□□□ 0.4
SEMA4D-204ENST00000420101 CUL4AQ13619 759 aa17.55■□□□□ 0.4
SEMA4D-204ENST00000420101 DBNDD2Q9BQY9 259 aa17.55■□□□□ 0.4
SEMA4D-204ENST00000420101 NPHP1O15259 732 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 NTSR2O95665 410 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 ANAPC15P60006 121 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 PPP4R3BQ5MIZ7 849 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 ZNF710Q8N1W2 664 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 ARHGEF1Q92888 912 aaKnown RBP17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 IL17RAQ96F46 866 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 SETDB2Q96T68 719 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 ESYT1Q9BSJ8 1104 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 TIMM10P62072 90 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 FAM193AP78312 1265 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 METTL24Q5JXM2 366 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 TBC1D9BQ66K14 1250 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 TMEM87AQ8NBN3 555 aa17.54■□□□□ 0.4
SEMA4D-204ENST00000420101 EVI5LQ96CN4 794 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms