RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 CEP126Q9P2H0 1117 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 FPGT-TNNI3KV9GXZ4 949 aa17.51■□□□□ 0.39
SHMT1P1-201ENST00000419974 IGHMBP2P38935 993 aaKnown RBP17.5■□□□□ 0.39
SHMT1P1-201ENST00000419974 TFCP2Q12800 502 aa17.5■□□□□ 0.39
SHMT1P1-201ENST00000419974 TICAM2Q86XR7 235 aa17.5■□□□□ 0.39
SHMT1P1-201ENST00000419974 ZNF594Q96JF6 807 aaPredicted RBP17.5■□□□□ 0.39
SHMT1P1-201ENST00000419974 APBB1O00213 710 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 PDE8BO95263 885 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 IFIT2P09913 472 aaKnown RBP17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 TTC22Q5TAA0 569 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 ANKRD18AQ8IVF6 992 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 GPATCH3Q96I76 525 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 SEC31BQ9NQW1 1179 aa17.49■□□□□ 0.39
SHMT1P1-201ENST00000419974 ERC2O15083 957 aa17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 YBX3P16989 372 aaKnown RBP eCLIP17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 TGFB2P61812 414 aa17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 DDX46Q7L014 1031 aaKnown RBP17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 OTUD7AQ8TE49 926 aaPredicted RBP17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 CRAMP1Q96RY5 1269 aa17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 CNNM1Q9NRU3 951 aa17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 ECHDC1Q9NTX5 307 aa17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 ZNF609O15014 1411 aa17.48■□□□□ 0.39
SHMT1P1-201ENST00000419974 NPHP1O15259 732 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 GLRX3O76003 335 aaKnown RBP17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 FGFR2P21802 821 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 PDE6BP35913 854 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 GRAPQ13588 217 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 AACSQ86V21 672 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 GRAPLQ8TC17 118 aaPredicted RBP17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 PI4K2BQ8TCG2 481 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 BBOX1O75936 387 aa17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 ZNF512BQ96KM6 892 aaPredicted RBP17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 CCDC85AQ96PX6 553 aaPredicted RBP17.47■□□□□ 0.39
SHMT1P1-201ENST00000419974 TNRC6CQ9HCJ0 1690 aaKnown RBP17.46■□□□□ 0.39
SHMT1P1-201ENST00000419974 KIF13BQ9NQT8 1826 aa17.46■□□□□ 0.39
SHMT1P1-201ENST00000419974 EIF5BO60841 1220 aaKnown RBP17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 GSPT1P15170 499 aaKnown RBP17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 ATP5JP18859 108 aa17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 METTL24Q5JXM2 366 aa17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 ZNF784Q8NCA9 323 aaPredicted RBP17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 LPIN2Q92539 896 aa17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 RBM17Q96I25 401 aaKnown RBP17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 BACH2Q9BYV9 841 aa17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 DBNLQ9UJU6 430 aaKnown RBP17.46■□□□□ 0.38
SHMT1P1-201ENST00000419974 A0A1B0GUL7 405 aa17.45■□□□□ 0.38
SHMT1P1-201ENST00000419974 SRGNP10124 158 aa17.45■□□□□ 0.38
SHMT1P1-201ENST00000419974 C8orf34Q49A92 452 aa17.45■□□□□ 0.38
SHMT1P1-201ENST00000419974 CELF1Q92879 486 aaKnown RBP17.45■□□□□ 0.38
SHMT1P1-201ENST00000419974 ANKRD2Q9GZV1 360 aa17.45■□□□□ 0.38
SHMT1P1-201ENST00000419974 MINPP1Q9UNW1 487 aa17.45■□□□□ 0.38
SHMT1P1-201ENST00000419974 NPR1P16066 1061 aa17.44■□□□□ 0.38
SHMT1P1-201ENST00000419974 UBE4AQ14139 1066 aa17.44■□□□□ 0.38
SHMT1P1-201ENST00000419974 C10orf71Q711Q0 1435 aa17.43■□□□□ 0.38
SHMT1P1-201ENST00000419974 CHRNDQ07001 517 aa17.43■□□□□ 0.38
SHMT1P1-201ENST00000419974 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
SHMT1P1-201ENST00000419974 ALDH1B1P30837 517 aa17.42■□□□□ 0.38
SHMT1P1-201ENST00000419974 ATP2B3Q16720 1220 aa17.42■□□□□ 0.38
SHMT1P1-201ENST00000419974 STYK1Q6J9G0 422 aa17.42■□□□□ 0.38
SHMT1P1-201ENST00000419974 MASTLQ96GX5 879 aa17.42■□□□□ 0.38
SHMT1P1-201ENST00000419974 CCDC8Q9H0W5 538 aaPredicted RBP17.42■□□□□ 0.38
SHMT1P1-201ENST00000419974 SDSP20132 328 aa17.41■□□□□ 0.38
SHMT1P1-201ENST00000419974 TIMM10P62072 90 aa17.41■□□□□ 0.38
SHMT1P1-201ENST00000419974 CCDC24Q8N4L8 307 aa17.41■□□□□ 0.38
SHMT1P1-201ENST00000419974 XAGE2Q96GT9 111 aa17.41■□□□□ 0.38
SHMT1P1-201ENST00000419974 DBNDD2Q9BQY9 259 aa17.41■□□□□ 0.38
SHMT1P1-201ENST00000419974 TLR7Q9NYK1 1049 aaKnown RBP17.41■□□□□ 0.38
SHMT1P1-201ENST00000419974 COL4A1P02462 1669 aa17.4■□□□□ 0.38
SHMT1P1-201ENST00000419974 ANKRD31Q8N7Z5 1873 aa17.4■□□□□ 0.38
SHMT1P1-201ENST00000419974 C15orf52Q6ZUT6 534 aaKnown RBP17.4■□□□□ 0.38
SHMT1P1-201ENST00000419974 HAUS7Q99871 368 aa17.4■□□□□ 0.38
SHMT1P1-201ENST00000419974 PODXL2Q9NZ53 605 aa17.4■□□□□ 0.38
SHMT1P1-201ENST00000419974 RFX7Q2KHR2 1363 aa17.39■□□□□ 0.37
SHMT1P1-201ENST00000419974 IFIT1P09914 478 aaKnown RBP17.39■□□□□ 0.37
SHMT1P1-201ENST00000419974 SLC5A1P13866 664 aa17.39■□□□□ 0.37
SHMT1P1-201ENST00000419974 CCDC158Q5M9N0 1113 aa17.39■□□□□ 0.37
SHMT1P1-201ENST00000419974 EVI5LQ96CN4 794 aa17.39■□□□□ 0.37
SHMT1P1-201ENST00000419974 LEMD3Q9Y2U8 911 aa17.39■□□□□ 0.37
SHMT1P1-201ENST00000419974 KIAA1551Q9HCM1 1747 aa17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 CDC45O75419 566 aa17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 ARID4AP29374 1257 aaPredicted RBP17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 SP8Q8IXZ3 490 aa17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 CNTROBQ8N137 903 aa17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 NEUROD6Q96NK8 337 aa17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 ARAP2Q8WZ64 1704 aa17.38■□□□□ 0.37
SHMT1P1-201ENST00000419974 ZNF804BA4D1E1 1349 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 A0A0G2JLW4 131 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 H0YIN7 160 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 IGSF3O75054 1194 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 UQCRFS1P1P0C7P4 283 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 KCNA3P22001 575 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
SHMT1P1-201ENST00000419974 XDHP47989 1333 aa17.36■□□□□ 0.37
SHMT1P1-201ENST00000419974 IRS2Q9Y4H2 1338 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms