RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 CEP170BQ9Y4F5 1589 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-205ENST00000419964 A6NJY4 79 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 PATL2C9JE40 543 aaKnown RBP9.44□□□□□ -0.9
EPHA4-205ENST00000419964 AXIN1O15169 862 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 SPINT1O43278 529 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 ATP2B4P23634 1241 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 CENPCQ03188 943 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 SCARF1Q14162 830 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 TLR1Q15399 786 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 CRIPAKQ8N1N5 446 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 PPP4R2Q9NY27 417 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 HRH3Q9Y5N1 445 aa9.44□□□□□ -0.9
EPHA4-205ENST00000419964 ZNF142P52746 1687 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-205ENST00000419964 CD163L1Q9NR16 1453 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 PRMT3O60678 531 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 BMP2P12643 396 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 GTF2E1P29083 439 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-205ENST00000419964 GPC1P35052 558 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 MTFR1Q15390 333 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
EPHA4-205ENST00000419964 IRX2Q9BZI1 471 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-205ENST00000419964 CABP1Q9NZU7 370 aa9.43□□□□□ -0.9
EPHA4-205ENST00000419964 SCHIP1Q9P0W5 487 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-205ENST00000419964 KIF20BQ96Q89 1820 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 ADAMTSL3P82987 1691 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 RIMS1Q86UR5 1692 aaKnown RBP9.42□□□□□ -0.9
EPHA4-205ENST00000419964 CDC42BPGQ6DT37 1551 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 CPSF1Q10570 1443 aaKnown RBP9.42□□□□□ -0.9
EPHA4-205ENST00000419964 CDK2AP1O14519 115 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 SSFA2P28290 1259 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 LTKP29376 864 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 WEE1P30291 646 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-205ENST00000419964 EPHA4P54764 986 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 WAPLQ7Z5K2 1190 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 NBPF15Q8N660 670 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 RUNDC1Q96C34 613 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 PRIMPOLQ96LW4 560 aa9.42□□□□□ -0.9
EPHA4-205ENST00000419964 INSM2Q96T92 566 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-205ENST00000419964 RNF144AP50876 292 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-205ENST00000419964 OCLNQ16625 522 aa9.41□□□□□ -0.9
EPHA4-205ENST00000419964 C6orf118Q5T5N4 469 aa9.41□□□□□ -0.9
EPHA4-205ENST00000419964 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
EPHA4-205ENST00000419964 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-205ENST00000419964 SCG3Q8WXD2 468 aaKnown RBP9.41□□□□□ -0.9
EPHA4-205ENST00000419964 NUDT16Q96DE0 195 aaKnown RBP9.41□□□□□ -0.9
EPHA4-205ENST00000419964 ZSCAN10Q96SZ4 725 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-205ENST00000419964 POLMQ9NP87 494 aaPredicted RBP9.41□□□□□ -0.9
EPHA4-205ENST00000419964 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
EPHA4-205ENST00000419964 RCAN3Q9UKA8 241 aa9.41□□□□□ -0.9
EPHA4-205ENST00000419964 PLEKHH1Q9ULM0 1364 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 ITSN1Q15811 1721 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 E9PSI1 815 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 FYB1O15117 783 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 LGR5O75473 907 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 NEFMP07197 916 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 IGFBP4P22692 258 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 MTHFSP49914 203 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 FOXK2Q01167 660 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 KCNA1Q09470 495 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 CCDC27Q2M243 656 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 SLC27A3Q5K4L6 730 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 C1orf216Q8TAB5 229 aa9.4□□□□□ -0.9
EPHA4-205ENST00000419964 FHDC1Q9C0D6 1143 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-205ENST00000419964 TSPAN10Q9H1Z9 355 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-205ENST00000419964 CXXC1Q9P0U4 656 aaPredicted RBP9.4□□□□□ -0.9
EPHA4-205ENST00000419964 AATKQ6ZMQ8 1374 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 ROBO2Q9HCK4 1378 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 ZNF521Q96K83 1311 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 ZBTB7CA1YPR0 619 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 TMEM214Q6NUQ4 689 aaKnown RBP9.39□□□□□ -0.91
EPHA4-205ENST00000419964 SLC9A9Q8IVB4 645 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
EPHA4-205ENST00000419964 AMOTL2Q9Y2J4 779 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 MON2Q7Z3U7 1717 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 ANKARQ7Z5J8 1434 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 SHPRHQ149N8 1683 aa9.39□□□□□ -0.91
EPHA4-205ENST00000419964 SETD1BQ9UPS6 1966 aaKnown RBP9.38□□□□□ -0.91
EPHA4-205ENST00000419964 BMP1P13497 986 aa9.38□□□□□ -0.91
EPHA4-205ENST00000419964 CTSOP43234 321 aaPredicted RBP9.38□□□□□ -0.91
EPHA4-205ENST00000419964 WDR63Q8IWG1 891 aa9.38□□□□□ -0.91
EPHA4-205ENST00000419964 COG3Q96JB2 828 aa9.38□□□□□ -0.91
EPHA4-205ENST00000419964 GRIP2Q9C0E4 1043 aa9.38□□□□□ -0.91
EPHA4-205ENST00000419964 GGNBP2Q9H3C7 697 aa9.38□□□□□ -0.91
EPHA4-205ENST00000419964 MTMR7Q9Y216 660 aa9.38□□□□□ -0.91
EPHA4-205ENST00000419964 XRN1Q8IZH2 1706 aaKnown RBP9.38□□□□□ -0.91
EPHA4-205ENST00000419964 PNPLA6Q8IY17 1366 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 AKAP12Q02952 1782 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 TTC21AQ8NDW8 1320 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 TOPAZ1Q8N9V7 1692 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 FOXO3O43524 673 aa9.37□□□□□ -0.91
EPHA4-205ENST00000419964 PPP1R12BO60237 982 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-205ENST00000419964 DIAPH1O60610 1272 aaKnown RBP9.37□□□□□ -0.91
EPHA4-205ENST00000419964 TNNT2P45379 298 aaPredicted RBP9.37□□□□□ -0.91
EPHA4-205ENST00000419964 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
EPHA4-205ENST00000419964 PSMA6P60900 246 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms