RNA–Protein interactions for RNA: ENST00000419654.6

SEC24D-202, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC24D, Length 2,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-202ENST00000419654 CHGBP05060 677 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 TFCP2Q12800 502 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 NHSQ6T4R5 1651 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 TAF6LQ9Y6J9 622 aa18.28■□□□□ 0.52
SEC24D-202ENST00000419654 GPTP24298 496 aa18.27■□□□□ 0.52
SEC24D-202ENST00000419654 ATG9AQ7Z3C6 839 aa18.27■□□□□ 0.52
SEC24D-202ENST00000419654 NMIQ13287 307 aaPredicted RBP18.27■□□□□ 0.51
SEC24D-202ENST00000419654 ZNF34Q8IZ26 560 aa18.27■□□□□ 0.51
SEC24D-202ENST00000419654 PDRG1Q9NUG6 133 aa18.27■□□□□ 0.51
SEC24D-202ENST00000419654 ONECUT3O60422 494 aaPredicted RBP18.26■□□□□ 0.51
SEC24D-202ENST00000419654 CSF1RP07333 972 aa18.26■□□□□ 0.51
SEC24D-202ENST00000419654 TNNI3KQ59H18 835 aa18.26■□□□□ 0.51
SEC24D-202ENST00000419654 FPGT-TNNI3KV9GXZ4 949 aa18.26■□□□□ 0.51
SEC24D-202ENST00000419654 BTAF1O14981 1849 aa18.26■□□□□ 0.51
SEC24D-202ENST00000419654 VPS37CA5D8V6 355 aaPredicted RBP18.26■□□□□ 0.51
SEC24D-202ENST00000419654 STX6O43752 255 aa18.26■□□□□ 0.51
SEC24D-202ENST00000419654 GJB2P29033 226 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 TSPY26PQ9H489 355 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 ZSCAN22P10073 491 aaPredicted RBP18.25■□□□□ 0.51
SEC24D-202ENST00000419654 PTF1AQ7RTS3 328 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 RBM8AQ9Y5S9 174 aaKnown RBP18.25■□□□□ 0.51
SEC24D-202ENST00000419654 UBN2Q6ZU65 1347 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 A0A0D9SFI3 127 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 CIAO1O76071 339 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 IL15P40933 162 aaPredicted RBP18.25■□□□□ 0.51
SEC24D-202ENST00000419654 FERMT3Q86UX7 667 aa18.25■□□□□ 0.51
SEC24D-202ENST00000419654 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.25■□□□□ 0.51
SEC24D-202ENST00000419654 MYH3P11055 1940 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 CAMTA2O94983 1202 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 FAM173BQ6P4H8 233 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 SYNE4Q8N205 404 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
SEC24D-202ENST00000419654 EYA2O00167 538 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 DNM1Q05193 864 aaKnown RBP18.24■□□□□ 0.51
SEC24D-202ENST00000419654 RUFY2Q8WXA3 655 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 GPR108Q9NPR9 543 aa18.24■□□□□ 0.51
SEC24D-202ENST00000419654 TRPC5Q9UL62 973 aaPredicted RBP18.24■□□□□ 0.51
SEC24D-202ENST00000419654 STK3Q13188 491 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 ME3Q16798 604 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 EVI5LQ96CN4 794 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 ZNF594Q96JF6 807 aaPredicted RBP18.23■□□□□ 0.51
SEC24D-202ENST00000419654 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
SEC24D-202ENST00000419654 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 CCDC57Q2TAC2 916 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 FBXO3Q9UK99 471 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 CYP46A1Q9Y6A2 500 aa18.23■□□□□ 0.51
SEC24D-202ENST00000419654 SBF2Q86WG5 1849 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 PTMAP06454 111 aaKnown RBP18.22■□□□□ 0.51
SEC24D-202ENST00000419654 ST3GAL1Q11201 340 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 PDLIM2Q96JY6 352 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 TRMT112Q9UI30 125 aaKnown RBP18.22■□□□□ 0.51
SEC24D-202ENST00000419654 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 CCDC171Q6TFL3 1326 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 CREB3L3Q68CJ9 461 aa18.22■□□□□ 0.51
SEC24D-202ENST00000419654 F13A1P00488 732 aa18.21■□□□□ 0.51
SEC24D-202ENST00000419654 ATP5JP18859 108 aa18.21■□□□□ 0.51
SEC24D-202ENST00000419654 ZNF589Q86UQ0 364 aaPredicted RBP18.21■□□□□ 0.51
SEC24D-202ENST00000419654 ZNF830Q96NB3 372 aaPredicted RBP18.21■□□□□ 0.51
SEC24D-202ENST00000419654 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.21■□□□□ 0.51
SEC24D-202ENST00000419654 IRS4O14654 1257 aaPredicted RBP18.21■□□□□ 0.51
SEC24D-202ENST00000419654 TTLL11Q8NHH1 800 aa18.21■□□□□ 0.51
SEC24D-202ENST00000419654 IL17RAQ96F46 866 aa18.21■□□□□ 0.51
SEC24D-202ENST00000419654 TPCN1Q9ULQ1 816 aa18.21■□□□□ 0.51
SEC24D-202ENST00000419654 R3HCC1Q9Y3T6 440 aaKnown RBP18.21■□□□□ 0.51
SEC24D-202ENST00000419654 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
SEC24D-202ENST00000419654 HCLS1P14317 486 aaPredicted RBP18.2■□□□□ 0.5
SEC24D-202ENST00000419654 CTSWP56202 376 aa18.2■□□□□ 0.5
SEC24D-202ENST00000419654 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
SEC24D-202ENST00000419654 NECTIN1Q15223 517 aa18.2■□□□□ 0.5
SEC24D-202ENST00000419654 FAM182BQ5T319 152 aa18.2■□□□□ 0.5
SEC24D-202ENST00000419654 GIMAP6Q6P9H5 292 aa18.2■□□□□ 0.5
SEC24D-202ENST00000419654 SYAP1Q96A49 352 aaPredicted RBP18.2■□□□□ 0.5
SEC24D-202ENST00000419654 DBNDD2Q9BQY9 259 aa18.2■□□□□ 0.5
SEC24D-202ENST00000419654 IFIT5Q13325 482 aaKnown RBP18.19■□□□□ 0.5
SEC24D-202ENST00000419654 USP25Q9UHP3 1055 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 PDE8AO60658 829 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 ZKSCAN1P17029 563 aaPredicted RBP18.19■□□□□ 0.5
SEC24D-202ENST00000419654 SLFNL1Q499Z3 407 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 CCDC129Q6ZRS4 1044 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 AK7Q96M32 723 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 ZNF609O15014 1411 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 LY75O60449 1722 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 SLC27A2O14975 620 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 PARP10Q53GL7 1025 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 SUSD4Q5VX71 490 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 DNAJC2Q99543 621 aaKnown RBP18.19■□□□□ 0.5
SEC24D-202ENST00000419654 ZSWIM6Q9HCJ5 1215 aa18.19■□□□□ 0.5
SEC24D-202ENST00000419654 RC3H1Q5TC82 1133 aaKnown RBP18.18■□□□□ 0.5
SEC24D-202ENST00000419654 SEC62Q99442 399 aaKnown RBP18.18■□□□□ 0.5
SEC24D-202ENST00000419654 NOL7Q9UMY1 257 aaKnown RBP18.18■□□□□ 0.5
SEC24D-202ENST00000419654 MTMR6Q9Y217 621 aa18.18■□□□□ 0.5
SEC24D-202ENST00000419654 KCNQ4P56696 695 aa18.18■□□□□ 0.5
SEC24D-202ENST00000419654 CCDC85AQ96PX6 553 aaPredicted RBP18.18■□□□□ 0.5
SEC24D-202ENST00000419654 GREM2Q9H772 168 aa18.18■□□□□ 0.5
SEC24D-202ENST00000419654 PRKCSHP14314 528 aaPredicted RBP18.17■□□□□ 0.5
SEC24D-202ENST00000419654 VPS53Q5VIR6 699 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 951.7 ms