RNA–Protein interactions for RNA: ENST00000419300.3

LINC00963-202, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 9,557 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-202ENST00000419300 MYH9P35579 1960 aaKnown RBP11.44□□□□□ -0.58
LINC00963-202ENST00000419300 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
LINC00963-202ENST00000419300 AFAP1L1Q8TED9 768 aa11.44□□□□□ -0.58
LINC00963-202ENST00000419300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC00963-202ENST00000419300 NOS1P29475 1434 aa11.44□□□□□ -0.58
LINC00963-202ENST00000419300 STARD3NLO95772 234 aa11.44□□□□□ -0.58
LINC00963-202ENST00000419300 TDRD12Q587J7 1177 aaKnown RBP11.44□□□□□ -0.58
LINC00963-202ENST00000419300 BCCIPQ9P287 314 aaKnown RBP eCLIP11.44□□□□□ -0.58
LINC00963-202ENST00000419300 CEP170Q5SW79 1584 aa11.44□□□□□ -0.58
LINC00963-202ENST00000419300 ZNF76P36508 570 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 ESYT1Q9BSJ8 1104 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 SEPT6Q14141 434 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 MYH15Q9Y2K3 1946 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 PLB1Q6P1J6 1458 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 NDC80O14777 642 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 SSR1P43307 286 aaKnown RBP11.43□□□□□ -0.58
LINC00963-202ENST00000419300 ATP11AP98196 1134 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 MCM6Q14566 821 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 FBF1Q8TES7 1133 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 NEK1Q96PY6 1258 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 ATP2A1O14983 1001 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
LINC00963-202ENST00000419300 N4BP3O15049 544 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 RPGRIP1Q96KN7 1286 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 SDSP20132 328 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 RBM28Q9NW13 759 aaKnown RBP11.43□□□□□ -0.58
LINC00963-202ENST00000419300 PPP1R2P41236 205 aa11.43□□□□□ -0.58
LINC00963-202ENST00000419300 A0A1W2PRG0 241 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 GBP1P32455 592 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 LACTBP83111 547 aaPredicted RBP11.42□□□□□ -0.58
LINC00963-202ENST00000419300 PDE4BQ07343 736 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 CAVIN4Q5BKX8 364 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 IL1RAPL2Q9NP60 686 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 DNAI1Q9UI46 699 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 FERP16591 822 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 IFIT5Q13325 482 aaKnown RBP11.42□□□□□ -0.58
LINC00963-202ENST00000419300 DAAM2Q86T65 1068 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 CUL5Q93034 780 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
LINC00963-202ENST00000419300 KIF5AQ12840 1032 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 GIMAP6Q6P9H5 292 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 IPO4Q8TEX9 1081 aaKnown RBP11.42□□□□□ -0.58
LINC00963-202ENST00000419300 TRAPPC8Q9Y2L5 1435 aa11.42□□□□□ -0.58
LINC00963-202ENST00000419300 SSBP05455 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
LINC00963-202ENST00000419300 GOLGA8AA7E2F4 631 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 MYL6BP14649 208 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 MFSD6Q6ZSS7 791 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 VPS18Q9P253 973 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 USH1CQ9Y6N9 552 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 PSMA7O14818 248 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 STAT6P42226 847 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 CTNNBL1Q8WYA6 563 aaPredicted RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 TSNARE1Q96NA8 513 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 PPIP5K1Q6PFW1 1433 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 TNNC1P63316 161 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 METTL24Q5JXM2 366 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 IARSP41252 1262 aaKnown RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 CAMSAP1Q5T5Y3 1602 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 TRIM47Q96LD4 638 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 IQCGQ9H095 443 aaKnown RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 HDAC9Q9UKV0 1011 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 TTF2Q9UNY4 1162 aaKnown RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 FAM135BQ49AJ0 1406 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 IDH1O75874 414 aaKnown RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 MAPK8IP2Q13387 824 aaPredicted RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 NUTM2AQ8IVF1 878 aaPredicted RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 THEMISQ8N1K5 641 aaPredicted RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 OSCARQ8IYS5 282 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 STIM2Q9P246 746 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 SMARCA5O60264 1052 aaPredicted RBP11.41□□□□□ -0.58
LINC00963-202ENST00000419300 IGHDP01880 384 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 SH2D4BQ5SQS7 431 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 ANKRD44Q8N8A2 993 aa11.41□□□□□ -0.58
LINC00963-202ENST00000419300 RIMS2Q9UQ26 1411 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 KDM2BQ8NHM5 1336 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 MYH3P11055 1940 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 CHMP4BP1P59074 171 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 SETDB1Q15047 1291 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 CCDC38Q502W7 563 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 MATR3P43243 847 aaKnown RBP eCLIP11.4□□□□□ -0.58
LINC00963-202ENST00000419300 FAM160A1Q05DH4 1040 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 UBE4AQ14139 1066 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 BICDL1Q6ZP65 573 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 IFIT1P09914 478 aaKnown RBP11.4□□□□□ -0.58
LINC00963-202ENST00000419300 CTNNA2P26232 953 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 PDE1AP54750 535 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 PPP2R3AQ06190 1150 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 CCDC40Q4G0X9 1142 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 SMC6Q96SB8 1091 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 TRPM2O94759 1503 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 NUP153P49790 1475 aaKnown RBP11.4□□□□□ -0.58
LINC00963-202ENST00000419300 ZNF500O60304 480 aaPredicted RBP11.4□□□□□ -0.58
LINC00963-202ENST00000419300 ALDH3A1P30838 453 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 CEP83Q9Y592 693 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 MYH11P35749 1972 aa11.4□□□□□ -0.58
LINC00963-202ENST00000419300 CCDC6Q16204 474 aa11.4□□□□□ -0.59
LINC00963-202ENST00000419300 MBIPQ9NS73 344 aa11.4□□□□□ -0.59
LINC00963-202ENST00000419300 ATP2A2P16615 1042 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms