RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SRRTQ9BXP5 876 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 UPF3BQ9BZI7 483 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 MKRN1Q9UHC7 482 aaKnown RBP7.47□□□□□ -1.21
CCNT1-202ENST00000417344 PPP1R12AO14974 1030 aaPredicted RBP7.46□□□□□ -1.22
CCNT1-202ENST00000417344 TADA3O75528 432 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 CAVIN2O95810 425 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 MAP2K1Q02750 393 aaPredicted RBP7.46□□□□□ -1.22
CCNT1-202ENST00000417344 LRCH2Q5VUJ6 765 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 FOXR1Q6PIV2 292 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 RNF217Q8TC41 542 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 PPP1R13BQ96KQ4 1090 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 ESYT1Q9BSJ8 1104 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 PDRG1Q9NUG6 133 aa7.46□□□□□ -1.22
CCNT1-202ENST00000417344 GOLGA6L19H0YKK7 550 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 SMAPO00193 183 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 LIG1P18858 919 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 SSTR3P32745 418 aaPredicted RBP7.45□□□□□ -1.22
CCNT1-202ENST00000417344 GORABQ5T7V8 394 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 E4F1Q66K89 784 aaPredicted RBP7.45□□□□□ -1.22
CCNT1-202ENST00000417344 POTEGQ6S5H5 508 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 RBM43Q6ZSC3 357 aaKnown RBP7.45□□□□□ -1.22
CCNT1-202ENST00000417344 TADA2BQ86TJ2 420 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 DNAAF4Q8WXU2 420 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 NECTIN2Q92692 538 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 SGSM3Q96HU1 749 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 REPIN1Q9BWE0 567 aaKnown RBP7.45□□□□□ -1.22
CCNT1-202ENST00000417344 DNAJC25Q9H1X3 360 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 ARFGAP3Q9NP61 516 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 RAPGEF6Q8TEU7 1601 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 FAM135BQ49AJ0 1406 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 TRAPPC8Q9Y2L5 1435 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 TTC21BQ7Z4L5 1316 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 IFT140Q96RY7 1462 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 DISP1Q96F81 1524 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 H3BQF6 201 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 GSDMDP57764 484 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 FUT8Q9BYC5 575 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 ANO2Q9NQ90 1003 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 DDX19AQ9NUU7 478 aaKnown RBP7.45□□□□□ -1.22
CCNT1-202ENST00000417344 DACT1Q9NYF0 836 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 SEPT9Q9UHD8 586 aaPredicted RBP7.45□□□□□ -1.22
CCNT1-202ENST00000417344 SMC3Q9UQE7 1217 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 CHMP3Q9Y3E7 222 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 USP16Q9Y5T5 823 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 PHLPP2Q6ZVD8 1323 aa7.45□□□□□ -1.22
CCNT1-202ENST00000417344 DUOX2Q9NRD8 1548 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 A0A087WUV0 522 aaPredicted RBP7.44□□□□□ -1.22
CCNT1-202ENST00000417344 POTEMA6NI47 508 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 CALRP27797 417 aaKnown RBP7.44□□□□□ -1.22
CCNT1-202ENST00000417344 MNAT1P51948 309 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 CLSTN2Q9H4D0 955 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 OSBPL3Q9H4L5 887 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 RBM28Q9NW13 759 aaKnown RBP7.44□□□□□ -1.22
CCNT1-202ENST00000417344 VPS18Q9P253 973 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 MTMR6Q9Y217 621 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 SSH2Q76I76 1423 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 KIF24Q5T7B8 1368 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 UNC13BO14795 1591 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 SMC2O95347 1197 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 USP8P40818 1118 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 EVCP57679 992 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 KRT85P78386 507 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 DIXDC1Q155Q3 683 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 ANKRD13DQ6ZTN6 518 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 TTC6Q86TZ1 520 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 HOMEZQ8IX15 550 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 SLF2Q8IX21 1173 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 MICALL1Q8N3F8 863 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 GPR161Q8N6U8 529 aaKnown RBP7.44□□□□□ -1.22
CCNT1-202ENST00000417344 ANKRD44Q8N8A2 993 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 SYTL4Q96C24 671 aaPredicted RBP7.44□□□□□ -1.22
CCNT1-202ENST00000417344 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 STK26Q9P289 416 aa7.44□□□□□ -1.22
CCNT1-202ENST00000417344 PTPRTO14522 1441 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 ANKRD65E5RJM6 399 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 APBB1O00213 710 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 VAMP4O75379 141 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 KCNJ6P48051 423 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 HNRNPMP52272 730 aaKnown RBP eCLIP7.43□□□□□ -1.22
CCNT1-202ENST00000417344 ETF1P62495 437 aaKnown RBP7.43□□□□□ -1.22
CCNT1-202ENST00000417344 IQCB1Q15051 598 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 PPP2R5AQ15172 486 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 LRRFIP1Q32MZ4 808 aaKnown RBP7.43□□□□□ -1.22
CCNT1-202ENST00000417344 HOMER1Q86YM7 354 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 RPAP2Q8IXW5 612 aaPredicted RBP7.43□□□□□ -1.22
CCNT1-202ENST00000417344 TACO1Q9BSH4 297 aaKnown RBP7.43□□□□□ -1.22
CCNT1-202ENST00000417344 CARD6Q9BX69 1037 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 API5Q9BZZ5 524 aaKnown RBP7.43□□□□□ -1.22
CCNT1-202ENST00000417344 EPC1Q9H2F5 836 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 DNAI1Q9UI46 699 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 TTC41PQ6P2S7 1318 aa7.43□□□□□ -1.22
CCNT1-202ENST00000417344 MAP2K7O14733 419 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 GNAI3P08754 354 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 PDE1AP54750 535 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 EIF5P55010 431 aaKnown RBP7.42□□□□□ -1.22
CCNT1-202ENST00000417344 MAP9Q49MG5 647 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 CWC27Q6UX04 472 aaKnown RBP7.42□□□□□ -1.22
CCNT1-202ENST00000417344 LRRC31Q6UY01 552 aa7.42□□□□□ -1.22
CCNT1-202ENST00000417344 NLRP7Q8WX94 980 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms