RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 TFCP2Q12800 502 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 ZSCAN23Q3MJ62 389 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 CDK5RAP3Q96JB5 506 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 CDC42BPGQ6DT37 1551 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 TCIRG1Q13488 830 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 PTPN14Q15678 1187 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 CAGE1Q8TC20 777 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 CEP89Q96ST8 783 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 IFIT3O14879 490 aaKnown RBP14.9□□□□□ -0.02
SCAF8-203ENST00000417268 SERPINC1P01008 464 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 HLA-DOAP06340 250 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 PRIMPOLQ96LW4 560 aa14.9□□□□□ -0.02
SCAF8-203ENST00000417268 LOC102724428A0A0B4J2F2 783 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 MYO1BO43795 1136 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 ITGA6P23229 1130 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 SIK1P57059 783 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 CAMK4Q16566 473 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 NAA16Q6N069 864 aaPredicted RBP14.89□□□□□ -0.03
SCAF8-203ENST00000417268 OGFOD1Q8N543 542 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 LAMC1P11047 1609 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 SLC9C2Q5TAH2 1124 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 FAM196AQ6ZSG2 479 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 FLAD1Q8NFF5 587 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 C16orf45Q96MC5 204 aaPredicted RBP14.89□□□□□ -0.03
SCAF8-203ENST00000417268 PAG1Q9NWQ8 432 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 CALCOCO1Q9P1Z2 691 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 HDAC9Q9UKV0 1011 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 LIMCH1Q9UPQ0 1083 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
SCAF8-203ENST00000417268 ME1P48163 572 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 DHX8Q14562 1220 aaKnown RBP14.88□□□□□ -0.03
SCAF8-203ENST00000417268 TNNT1P13805 278 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 TMCO3Q6UWJ1 677 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 MFSD6Q6ZSS7 791 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 C16orf71Q8IYS4 520 aaPredicted RBP14.88□□□□□ -0.03
SCAF8-203ENST00000417268 GDPD2Q9HCC8 539 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 TNS3Q68CZ2 1445 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 ADCY5O95622 1261 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 MCMDC2Q4G0Z9 681 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 TSPYL1Q9H0U9 437 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 CFAP45Q9UL16 551 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 OFD1O75665 1012 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 RXRBP28702 533 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 CCDC83Q8IWF9 413 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 DDX11Q96FC9 970 aa14.88□□□□□ -0.03
SCAF8-203ENST00000417268 SEC63Q9UGP8 760 aaKnown RBP14.88□□□□□ -0.03
SCAF8-203ENST00000417268 NBPF7P0C2Y1 421 aaPredicted RBP14.87□□□□□ -0.03
SCAF8-203ENST00000417268 NAP1L1P55209 391 aaKnown RBP14.87□□□□□ -0.03
SCAF8-203ENST00000417268 CEP57L1Q8IYX8 460 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 FERMT3Q86UX7 667 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 NCOA7Q8NI08 942 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 KIF18AQ8NI77 898 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 NEK1Q96PY6 1258 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 ASAP1Q9ULH1 1129 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 ZKSCAN5Q9Y2L8 839 aa14.87□□□□□ -0.03
SCAF8-203ENST00000417268 EIF3JO75822 258 aaKnown RBP14.86□□□□□ -0.03
SCAF8-203ENST00000417268 CATIPQ7Z7H3 387 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 JDP2Q8WYK2 163 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 ERLIN1O75477 346 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 CDR1P51861 262 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 HAND2P61296 217 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 NEURL1BA8MQ27 555 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 SUCLG2Q96I99 432 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 CABP5Q9NP86 173 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 USP31Q70CQ4 1352 aa14.86□□□□□ -0.03
SCAF8-203ENST00000417268 PIBF1Q8WXW3 757 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 ESYT1Q9BSJ8 1104 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 DEF6Q9H4E7 631 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 C1orf167Q5SNV9 1468 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 NEXMIFQ5QGS0 1516 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 ADAMTS13Q76LX8 1427 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 ZNF830Q96NB3 372 aaPredicted RBP14.85□□□□□ -0.03
SCAF8-203ENST00000417268 DLC1Q96QB1 1528 aa14.85□□□□□ -0.03
SCAF8-203ENST00000417268 KIF2AO00139 706 aaPredicted RBP14.85□□□□□ -0.03
SCAF8-203ENST00000417268 PUM3Q15397 648 aaKnown RBP14.85□□□□□ -0.03
SCAF8-203ENST00000417268 BRPF1P55201 1214 aaPredicted RBP14.84□□□□□ -0.03
SCAF8-203ENST00000417268 LRSAM1Q6UWE0 723 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 KRT27Q7Z3Y8 459 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 SLC4A4Q9Y6R1 1079 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 A0A1B0GUL7 405 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 GOLGA8BA8MQT2 603 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 PLCG2P16885 1265 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 TMEM67Q5HYA8 995 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 PIK3C2BO00750 1634 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 WDHD1O75717 1129 aaPredicted RBP14.84□□□□□ -0.03
SCAF8-203ENST00000417268 CCDC96Q2M329 555 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 GOLGA8AA7E2F4 631 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 SEC24BO95487 1268 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 PLEKHM2Q8IWE5 1019 aa14.84□□□□□ -0.03
SCAF8-203ENST00000417268 BBXQ8WY36 941 aaPredicted RBP14.84□□□□□ -0.03
SCAF8-203ENST00000417268 F8W031 263 aaPredicted RBP14.83□□□□□ -0.03
SCAF8-203ENST00000417268 RNF113AO15541 343 aaKnown RBP14.83□□□□□ -0.03
SCAF8-203ENST00000417268 GNAT2P19087 354 aa14.83□□□□□ -0.03
SCAF8-203ENST00000417268 TTLL12Q14166 644 aaPredicted RBP14.83□□□□□ -0.03
SCAF8-203ENST00000417268 NOLC1Q14978 699 aaKnown RBP eCLIP14.83□□□□□ -0.03
SCAF8-203ENST00000417268 TTLL7Q6ZT98 887 aa14.83□□□□□ -0.03
SCAF8-203ENST00000417268 DENND2AQ9ULE3 1009 aa14.83□□□□□ -0.03
SCAF8-203ENST00000417268 IL6STP40189 918 aaPredicted RBP14.83□□□□□ -0.04
SCAF8-203ENST00000417268 TIMM10P62072 90 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms