RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
NCKIPSD-204ENST00000416649 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
NCKIPSD-204ENST00000416649 SMC2O95347 1197 aa17.19■□□□□ 0.34
NCKIPSD-204ENST00000416649 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-204ENST00000416649 E4F1Q66K89 784 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-204ENST00000416649 KDM4FA0A1W2PPD8 638 aa17.18■□□□□ 0.34
NCKIPSD-204ENST00000416649 GTF2A1P52655 376 aaPredicted RBP17.18■□□□□ 0.34
NCKIPSD-204ENST00000416649 RGS22Q8NE09 1264 aa17.18■□□□□ 0.34
NCKIPSD-204ENST00000416649 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
NCKIPSD-204ENST00000416649 TOMM22Q9NS69 142 aa17.18■□□□□ 0.34
NCKIPSD-204ENST00000416649 NLRP2Q9NX02 1062 aa17.18■□□□□ 0.34
NCKIPSD-204ENST00000416649 CSB-PGBD3P0DP91 1061 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 OS9Q13438 667 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 STX1AQ16623 288 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 TMC6Q7Z403 805 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 PI4K2BQ8TCG2 481 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 ZNF142P52746 1687 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 DHX16O60231 1041 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 RBM43Q6ZSC3 357 aaKnown RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 KCNH5Q8NCM2 988 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 L2HGDHQ9H9P8 463 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 ZNF335Q9H4Z2 1342 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 KCNQ3O43525 872 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 ZNF530Q6P9A1 599 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 SARM1Q6SZW1 724 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 CARD6Q9BX69 1037 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 EFCC1Q9HA90 598 aa17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 ORC3Q9UBD5 711 aaPredicted RBP17.17■□□□□ 0.34
NCKIPSD-204ENST00000416649 RHPN1Q8TCX5 695 aa17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 ZSWIM6Q9HCJ5 1215 aa17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 H3BQV1 296 aa17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 SMC1AQ14683 1233 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 IFFO2Q5TF58 517 aa17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 CWC15Q9P013 229 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 CCDC9Q9Y3X0 531 aaKnown RBP17.16■□□□□ 0.34
NCKIPSD-204ENST00000416649 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 ZRANB2O95218 330 aaKnown RBP eCLIP17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 IFIT2P09913 472 aaKnown RBP17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 SFPQP23246 707 aaKnown RBP eCLIP17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 FLIIQ13045 1269 aa17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 CASQ1P31415 396 aa17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 PPP1R42Q7Z4L9 355 aa17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 ARHGEF25Q86VW2 580 aa17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 C1orf167Q5SNV9 1468 aa17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 SOS1Q07889 1333 aaPredicted RBP17.15■□□□□ 0.34
NCKIPSD-204ENST00000416649 SASH3O75995 380 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 GSDMDP57764 484 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 RUFY2Q8WXA3 655 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 FTOQ9C0B1 505 aaKnown RBP eCLIP17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 JAK2O60674 1132 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 CAVIN2O95810 425 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 MUM1L1Q5H9M0 696 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 KDRP35968 1356 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 CRB1P82279 1406 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 SRGAP3O43295 1099 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 NRDCO43847 1150 aa17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 RBM8AQ9Y5S9 174 aaKnown RBP17.14■□□□□ 0.33
NCKIPSD-204ENST00000416649 KINO60870 393 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 EVCP57679 992 aa17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 DHX40Q8IX18 779 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 CEP57L1Q8IYX8 460 aa17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 AK7Q96M32 723 aa17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 PHAXQ9H814 394 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 RRP15Q9Y3B9 282 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 NOP2P46087 812 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 ZRSR1Q15695 479 aaKnown RBP17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 CCDC93Q567U6 631 aa17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 CCDC73Q6ZRK6 1079 aa17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 IFNKQ9P0W0 207 aa17.13■□□□□ 0.33
NCKIPSD-204ENST00000416649 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 ANO10Q9NW15 660 aa17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 AOX1Q06278 1338 aa17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 BRF1Q92994 677 aa17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 XPO4Q9C0E2 1151 aaKnown RBP17.12■□□□□ 0.33
NCKIPSD-204ENST00000416649 ARMCX5Q6P1M9 558 aa17.11■□□□□ 0.33
NCKIPSD-204ENST00000416649 ETF1P62495 437 aaKnown RBP17.11■□□□□ 0.33
NCKIPSD-204ENST00000416649 TEFQ10587 303 aa17.11■□□□□ 0.33
NCKIPSD-204ENST00000416649 NBPF11Q86T75 865 aa17.11■□□□□ 0.33
NCKIPSD-204ENST00000416649 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
NCKIPSD-204ENST00000416649 ANKRD65E5RJM6 399 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 TBC1D8O95759 1140 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 SRLQ86TD4 932 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 GOLGA6L1Q8N7Z2 621 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 SDF4Q9BRK5 362 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 USP44Q9H0E7 712 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 ADAM21Q9UKJ8 722 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 BIN1O00499 593 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 CADPS2Q86UW7 1296 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 GPATCH11Q8N954 259 aa17.1■□□□□ 0.33
NCKIPSD-204ENST00000416649 ICE2Q659A1 982 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
NCKIPSD-204ENST00000416649 TM6SF1Q9BZW5 370 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms