RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 SIK1P57059 783 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 IGHDP01880 384 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 NEFHP12036 1026 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 CCT2P78371 535 aaKnown RBP18.06■□□□□ 0.48
PHRF1-203ENST00000416188 ARHGEF25Q86VW2 580 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 TXLNBQ8N3L3 684 aa18.06■□□□□ 0.48
PHRF1-203ENST00000416188 VAMP4O75379 141 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 ARHGAP29Q52LW3 1261 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 EAPPQ56P03 285 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-203ENST00000416188 METTL22Q9BUU2 404 aaPredicted RBP18.05■□□□□ 0.48
PHRF1-203ENST00000416188 DPY19L2Q6NUT2 758 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 TNPO1Q92973 898 aaKnown RBP18.05■□□□□ 0.48
PHRF1-203ENST00000416188 PREX2Q70Z35 1606 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 TMEM67Q5HYA8 995 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 PPP4R3BQ5MIZ7 849 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 LEKR1Q6ZMV7 388 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 GDPD2Q9HCC8 539 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 RIMBP3CA6NJZ7 1639 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 RIMBP3BA6NNM3 1639 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 RIMBP3Q9UFD9 1639 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 ZSCAN30Q86W11 494 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 WDR17Q8IZU2 1322 aa18.05■□□□□ 0.48
PHRF1-203ENST00000416188 ATP8B2P98198 1209 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 CCDC183Q5T5S1 534 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 GOLGA6L10A6NI86 522 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 ERLIN1O75477 346 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 MAGEB6P1A0A0J9YX57 407 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 HOXB7P09629 217 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 BMP2KLQ5H9B9 411 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 PPIP5K2O43314 1243 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 SFPQP23246 707 aaKnown RBP eCLIP18.04■□□□□ 0.488e-6■■■■□ 25.1
PHRF1-203ENST00000416188 C2CD5Q86YS7 1000 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 VTI1AQ96AJ9 217 aa18.04■□□□□ 0.48
PHRF1-203ENST00000416188 CKAP2LQ8IYA6 745 aa18.03■□□□□ 0.48
PHRF1-203ENST00000416188 CENPHQ9H3R5 247 aa18.03■□□□□ 0.48
PHRF1-203ENST00000416188 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
PHRF1-203ENST00000416188 ANO10Q9NW15 660 aa18.03■□□□□ 0.48
PHRF1-203ENST00000416188 CCDC66A2RUB6 948 aa18.03■□□□□ 0.48
PHRF1-203ENST00000416188 NLRP5P59047 1200 aa18.03■□□□□ 0.48
PHRF1-203ENST00000416188 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
PHRF1-203ENST00000416188 KIAA1328Q86T90 577 aa18.03■□□□□ 0.48
PHRF1-203ENST00000416188 BIN2Q9UBW5 565 aaPredicted RBP18.03■□□□□ 0.48
PHRF1-203ENST00000416188 A2ML1A8K2U0 1454 aa18.02■□□□□ 0.48
PHRF1-203ENST00000416188 CCDC194A0A1B0GVG4 234 aa18.02■□□□□ 0.48
PHRF1-203ENST00000416188 PLS1Q14651 629 aa18.02■□□□□ 0.48
PHRF1-203ENST00000416188 BICC1Q9H694 974 aaKnown RBP18.02■□□□□ 0.48
PHRF1-203ENST00000416188 ADGBQ8N7X0 1667 aa18.02■□□□□ 0.48
PHRF1-203ENST00000416188 PTPRTO14522 1441 aa18.02■□□□□ 0.48
PHRF1-203ENST00000416188 RBM6P78332 1123 aaKnown RBP18.02■□□□□ 0.47
PHRF1-203ENST00000416188 TMEM87AQ8NBN3 555 aa18.02■□□□□ 0.47
PHRF1-203ENST00000416188 MCM9Q9NXL9 1143 aa18.02■□□□□ 0.47
PHRF1-203ENST00000416188 CCDC12Q8WUD4 166 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-203ENST00000416188 DENND2AQ9ULE3 1009 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 ATF5Q9Y2D1 282 aaPredicted RBP18.01■□□□□ 0.47
PHRF1-203ENST00000416188 MIGA1Q8NAN2 632 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 INSRP06213 1382 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 ABCC3O15438 1527 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 PPFIA3O75145 1194 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 FAM193AP78312 1265 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 TFCP2Q12800 502 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 NCOA7Q8NI08 942 aa18.01■□□□□ 0.47
PHRF1-203ENST00000416188 SSRP1Q08945 709 aaKnown RBP18■□□□□ 0.47
PHRF1-203ENST00000416188 TRMT1LQ7Z2T5 733 aaKnown RBP18■□□□□ 0.47
PHRF1-203ENST00000416188 RRP9O43818 475 aaKnown RBP18■□□□□ 0.47
PHRF1-203ENST00000416188 UBXN4Q92575 508 aa18■□□□□ 0.47
PHRF1-203ENST00000416188 CCDC178Q5BJE1 867 aa18■□□□□ 0.47
PHRF1-203ENST00000416188 CCDC144CPQ8IYA2 1237 aa18■□□□□ 0.47
PHRF1-203ENST00000416188 ESR2Q92731 530 aa18■□□□□ 0.47
PHRF1-203ENST00000416188 SPATA31A3Q5VYP0 1347 aa18■□□□□ 0.47
PHRF1-203ENST00000416188 H7C1D1 291 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 USPL1Q5W0Q7 1092 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 MAGEB6Q8N7X4 407 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 EIF3JO75822 258 aaKnown RBP17.99■□□□□ 0.47
PHRF1-203ENST00000416188 TRAF1Q13077 416 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 MICU3Q86XE3 530 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 CNKSR1Q969H4 720 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 PAG1Q9NWQ8 432 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 USP25Q9UHP3 1055 aa17.99■□□□□ 0.47
PHRF1-203ENST00000416188 GJB2P29033 226 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 ANKRD44Q8N8A2 993 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 PER1O15534 1290 aaPredicted RBP17.98■□□□□ 0.47
PHRF1-203ENST00000416188 PRKG1Q13976 671 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 TTC22Q5TAA0 569 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 RAB34Q9BZG1 259 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 THRAP3Q9Y2W1 955 aaKnown RBP17.98■□□□□ 0.47
PHRF1-203ENST00000416188 G2E3Q7L622 706 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 PICK1Q9NRD5 415 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 HSPA1LP34931 641 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 FSIP1Q8NA03 581 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
PHRF1-203ENST00000416188 MAST3O60307 1309 aa17.97■□□□□ 0.47
PHRF1-203ENST00000416188 TAX1BP1Q86VP1 789 aa17.97■□□□□ 0.47
PHRF1-203ENST00000416188 TAF4BQ92750 862 aa17.97■□□□□ 0.47
PHRF1-203ENST00000416188 KRT23Q9C075 422 aa17.97■□□□□ 0.47
PHRF1-203ENST00000416188 STX6O43752 255 aa17.97■□□□□ 0.47
PHRF1-203ENST00000416188 TMEM266Q2M3C6 531 aa17.97■□□□□ 0.47
PHRF1-203ENST00000416188 EYA2O00167 538 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 178.3 ms