RNA–Protein interactions for RNA: ENST00000415824.1

AP001043.1-203, humanhuman

TSL 5 BASIC

Gene AP001043.1, Length 407 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-203ENST00000415824 SREBF2Q12772 1141 aa9.73□□□□□ -0.85
AP001043.1-203ENST00000415824 WASHC4Q2M389 1173 aa9.73□□□□□ -0.85
AP001043.1-203ENST00000415824 RTF1Q92541 710 aaKnown RBP9.73□□□□□ -0.85
AP001043.1-203ENST00000415824 R3HDMLQ9H3Y0 253 aa9.73□□□□□ -0.85
AP001043.1-203ENST00000415824 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
AP001043.1-203ENST00000415824 DLG5Q8TDM6 1919 aa9.73□□□□□ -0.85
AP001043.1-203ENST00000415824 ZNF646O15015 1829 aaPredicted RBP9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 EYSQ5T1H1 3165 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 ALDH1A1P00352 501 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 EIF4A1P60842 406 aaKnown RBP9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 ANGEL2Q5VTE6 544 aaKnown RBP9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 DDX46Q7L014 1031 aaKnown RBP9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 OTOP1Q7RTM1 612 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 PNISRQ8TF01 805 aaKnown RBP9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 GMLQ99445 158 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 DBNDD1Q9H9R9 158 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 KCNQ5Q9NR82 932 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 POLLQ9UGP5 575 aa9.72□□□□□ -0.85
AP001043.1-203ENST00000415824 COL4A1P02462 1669 aa9.71□□□□□ -0.85
AP001043.1-203ENST00000415824 ECE2O60344 883 aa9.71□□□□□ -0.86
AP001043.1-203ENST00000415824 SCARF1Q14162 830 aa9.71□□□□□ -0.86
AP001043.1-203ENST00000415824 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
AP001043.1-203ENST00000415824 NGEFQ8N5V2 710 aa9.71□□□□□ -0.86
AP001043.1-203ENST00000415824 AGBL3Q8NEM8 1001 aa9.71□□□□□ -0.86
AP001043.1-203ENST00000415824 PTPN22Q9Y2R2 807 aa9.71□□□□□ -0.86
AP001043.1-203ENST00000415824 EN2P19622 333 aaPredicted RBP9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 INHBEP58166 350 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 DCTN1Q14203 1278 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 PDIA6Q15084 440 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 MOB2Q70IA6 237 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 NLRP10Q86W26 655 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 EYA3Q99504 573 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 PODXL2Q9NZ53 605 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 RRP7AQ9Y3A4 280 aaKnown RBP9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 TRIM17Q9Y577 477 aa9.7□□□□□ -0.86
AP001043.1-203ENST00000415824 PRUNE2Q8WUY3 3088 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 UBE2Q2LH0YL09 131 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 HCLS1P14317 486 aaPredicted RBP9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 MYL6BP14649 208 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 SF3B3Q15393 1217 aaKnown RBP9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 HSP90AB3PQ58FF7 597 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 LDLRAD1Q5T700 205 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 RSBN1LQ6PCB5 846 aaPredicted RBP9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 TBC1D16Q8TBP0 767 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 SH3TC1Q8TE82 1336 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 ZNF333Q96JL9 665 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 PRO3102Q9H379 93 aa9.69□□□□□ -0.86
AP001043.1-203ENST00000415824 GPSM2P81274 684 aa9.68□□□□□ -0.86
AP001043.1-203ENST00000415824 SPRYD7Q5W111 196 aa9.68□□□□□ -0.86
AP001043.1-203ENST00000415824 CELF1Q92879 486 aaKnown RBP9.68□□□□□ -0.86
AP001043.1-203ENST00000415824 MYOZ2Q9NPC6 264 aa9.68□□□□□ -0.86
AP001043.1-203ENST00000415824 MIS18AQ9NYP9 233 aa9.68□□□□□ -0.86
AP001043.1-203ENST00000415824 NSFL1CQ9UNZ2 370 aaKnown RBP9.68□□□□□ -0.86
AP001043.1-203ENST00000415824 MANSC4A6NHS7 340 aaPredicted RBP9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 H0YGN5 161 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 USP17L8P0C7I0 530 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 MNX1P50219 401 aaPredicted RBP9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 MMP14P50281 582 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 TCIRG1Q13488 830 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 DOK7Q18PE1 504 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 CC2D1BQ5T0F9 858 aaKnown RBP9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 IFNL1Q8IU54 200 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 SLC17A8Q8NDX2 589 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 ERO1AQ96HE7 468 aa9.67□□□□□ -0.86
AP001043.1-203ENST00000415824 COL1A1P02452 1464 aaPredicted RBP9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 UNCXA6NJT0 531 aa9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 C6orf229H3BNL8 230 aa9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 RIMBP2O15034 1052 aa9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 ZBTB48P10074 688 aaPredicted RBP9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 PTPN12Q05209 780 aaKnown RBP9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 MAP3K11Q16584 847 aa9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 ZC3H12CQ9C0D7 883 aaKnown RBP9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 TRMT112Q9UI30 125 aaKnown RBP9.66□□□□□ -0.86
AP001043.1-203ENST00000415824 IGF2BP3O00425 579 aaKnown RBP eCLIP9.65□□□□□ -0.86
AP001043.1-203ENST00000415824 CAP1Q01518 475 aa9.65□□□□□ -0.86
AP001043.1-203ENST00000415824 NUDCQ9Y266 331 aa9.65□□□□□ -0.86
AP001043.1-203ENST00000415824 ECM29Q5VYK3 1845 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 TESPA1A2RU30 521 aaPredicted RBP9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 NF2P35240 595 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 PROSER3Q2NL68 480 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 NBPF9Q3BBW0 867 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 ARMC9Q7Z3E5 817 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 CFAP53Q96M91 514 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 TMEM106CQ9BVX2 250 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 EFCC1Q9HA90 598 aa9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 RBM27Q9P2N5 1060 aaKnown RBP9.64□□□□□ -0.87
AP001043.1-203ENST00000415824 A0A1W2PPC1 479 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 WNT10BO00744 389 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 RPS8P62241 208 aaKnown RBP9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 MKRN3Q13064 507 aaKnown RBP9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 PRAMEF18Q5VWM3 479 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 DIEXFQ68CQ4 756 aaKnown RBP9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 CHRDL2Q6WN34 429 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 PODNQ7Z5L7 613 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 CD99L2Q8TCZ2 262 aa9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 ZBED3Q96IU2 234 aaPredicted RBP9.63□□□□□ -0.87
AP001043.1-203ENST00000415824 THUMPD2Q9BTF0 503 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms