RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 EPB42P16452 691 aa9.06□□□□□ -0.96
EPHA4-204ENST00000415749 PCSK2P16519 638 aa9.06□□□□□ -0.96
EPHA4-204ENST00000415749 ZAP70P43403 619 aa9.06□□□□□ -0.96
EPHA4-204ENST00000415749 HNRNPMP52272 730 aaKnown RBP eCLIP9.06□□□□□ -0.96
EPHA4-204ENST00000415749 BTLAQ7Z6A9 289 aa9.06□□□□□ -0.96
EPHA4-204ENST00000415749 BRPF3Q9ULD4 1205 aa9.06□□□□□ -0.96
EPHA4-204ENST00000415749 KIF14Q15058 1648 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 MROH2AA6NES4 1674 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 CEP170BQ9Y4F5 1589 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-204ENST00000415749 IDH3AP50213 366 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 ARSDP51689 593 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 MARSP56192 900 aaKnown RBP9.05□□□□□ -0.96
EPHA4-204ENST00000415749 ARHGAP4P98171 946 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 FOXR1Q6PIV2 292 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 THEMISQ8N1K5 641 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-204ENST00000415749 CEP63Q96MT8 703 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 DCTN4Q9UJW0 460 aa9.05□□□□□ -0.96
EPHA4-204ENST00000415749 ATXN7O15265 892 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-204ENST00000415749 PPFIA3O75145 1194 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
EPHA4-204ENST00000415749 ZNF16P17020 682 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-204ENST00000415749 ECM1Q16610 540 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 TTC16Q8NEE8 873 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 PIK3R5Q8WYR1 880 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 ZCCHC2Q9C0B9 1178 aaKnown RBP9.04□□□□□ -0.96
EPHA4-204ENST00000415749 DMGDHQ9UI17 866 aaKnown RBP9.04□□□□□ -0.96
EPHA4-204ENST00000415749 PCDHGC4Q9Y5F7 938 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 SUPT6HQ7KZ85 1726 aaKnown RBP9.04□□□□□ -0.96
EPHA4-204ENST00000415749 FMN1Q68DA7 1419 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 KIDINS220Q9ULH0 1771 aa9.04□□□□□ -0.96
EPHA4-204ENST00000415749 A2ML1A8K2U0 1454 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 POTECB2RU33 542 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 ZBTB39O15060 712 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 FAM157BP0CG42 384 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 CDK11BP21127 795 aaKnown RBP9.03□□□□□ -0.96
EPHA4-204ENST00000415749 MAPK1P28482 360 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 MZF1P28698 734 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-204ENST00000415749 USP5P45974 858 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 TYRO3Q06418 890 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 DBN1Q16643 649 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 ZNF837Q96EG3 531 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-204ENST00000415749 CITED4Q96RK1 184 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 BCL2L13Q9BXK5 485 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 PHF24Q9UPV7 400 aa9.03□□□□□ -0.96
EPHA4-204ENST00000415749 CDC42BPBQ9Y5S2 1711 aa9.02□□□□□ -0.96
EPHA4-204ENST00000415749 FAM26DQ5JW98 314 aa9.02□□□□□ -0.97
EPHA4-204ENST00000415749 ZNF787Q6DD87 383 aa9.02□□□□□ -0.97
EPHA4-204ENST00000415749 ZSCAN29Q8IWY8 852 aaPredicted RBP9.02□□□□□ -0.97
EPHA4-204ENST00000415749 KLRG1Q96E93 195 aa9.02□□□□□ -0.97
EPHA4-204ENST00000415749 TRERF1Q96PN7 1200 aa9.02□□□□□ -0.97
EPHA4-204ENST00000415749 BRD7Q9NPI1 651 aa9.02□□□□□ -0.97
EPHA4-204ENST00000415749 MYO3AQ8NEV4 1616 aa9.02□□□□□ -0.97
EPHA4-204ENST00000415749 ABCC1P33527 1531 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 ZNF142P52746 1687 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 CLTCQ00610 1675 aaKnown RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 CDC14CA4D256 554 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 INPP5BP32019 993 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 LAMC2Q13753 1193 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 SV2AQ7L0J3 742 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 ATCAYQ86WG3 371 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 NPAS3Q8IXF0 933 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 EDEM1Q92611 657 aa9.01□□□□□ -0.97
EPHA4-204ENST00000415749 CUEDC1Q9NWM3 386 aaPredicted RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 NXF1Q9UBU9 619 aaKnown RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 FNDC3AQ9Y2H6 1198 aaKnown RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 DNMT1P26358 1616 aaKnown RBP9.01□□□□□ -0.97
EPHA4-204ENST00000415749 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9□□□□□ -0.97
EPHA4-204ENST00000415749 OPLAHO14841 1288 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 KHNYNO15037 678 aaKnown RBP9□□□□□ -0.97
EPHA4-204ENST00000415749 FZD6O60353 706 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 PDE3BQ13370 1112 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 GPR152Q8TDT2 470 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 GIPC2Q8TF65 315 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 NANOS1Q8WY41 292 aaKnown RBP9□□□□□ -0.97
EPHA4-204ENST00000415749 GTPBP3Q969Y2 492 aaKnown RBP9□□□□□ -0.97
EPHA4-204ENST00000415749 RBCK1Q9BYM8 510 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 C11orf16Q9NQ32 467 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 ATXN7L1Q9ULK2 861 aaPredicted RBP9□□□□□ -0.97
EPHA4-204ENST00000415749 ALKQ9UM73 1620 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 A2MP01023 1474 aa9□□□□□ -0.97
EPHA4-204ENST00000415749 TNRQ92752 1358 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 SAMD9LQ8IVG5 1584 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 EEA1Q15075 1411 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 DCDC2BA2VCK2 349 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 PDGFAP04085 211 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 THBS1P07996 1170 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 KCNQ4P56696 695 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 EHHADHQ08426 723 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 RGL4Q8IZJ4 473 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 TMC1Q8TDI8 760 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 CFHR5Q9BXR6 569 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 CCDC87Q9NVE4 849 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 POLIQ9UNA4 740 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 KCNH4Q9UQ05 1017 aa8.99□□□□□ -0.97
EPHA4-204ENST00000415749 RTCBQ9Y3I0 505 aaKnown RBP8.99□□□□□ -0.97
EPHA4-204ENST00000415749 NPHP4O75161 1426 aaPredicted RBP8.98□□□□□ -0.97
EPHA4-204ENST00000415749 ITSN2Q9NZM3 1697 aa8.98□□□□□ -0.97
EPHA4-204ENST00000415749 TNP2Q05952 138 aa8.98□□□□□ -0.97
EPHA4-204ENST00000415749 UBAP2LQ14157 1087 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms