RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 TRMT112Q9UI30 125 aaKnown RBP21.44■■□□□ 1.02
CDC42EP1-202ENST00000415670 TSPYL4Q9UJ04 414 aa21.44■■□□□ 1.02
CDC42EP1-202ENST00000415670 SCAF8Q9UPN6 1271 aaKnown RBP21.44■■□□□ 1.02
CDC42EP1-202ENST00000415670 IL16Q14005 1332 aa21.44■■□□□ 1.02
CDC42EP1-202ENST00000415670 GOLGA2Q08379 1002 aa21.43■■□□□ 1.02
CDC42EP1-202ENST00000415670 GBA2Q9HCG7 927 aaPredicted RBP21.43■■□□□ 1.02
CDC42EP1-202ENST00000415670 RTL9Q8NET4 1388 aa21.43■■□□□ 1.02
CDC42EP1-202ENST00000415670 ZNF157P51786 506 aaPredicted RBP21.42■■□□□ 1.02
CDC42EP1-202ENST00000415670 GPSM2P81274 684 aa21.42■■□□□ 1.02
CDC42EP1-202ENST00000415670 CSRNP1Q96S65 589 aa21.42■■□□□ 1.02
CDC42EP1-202ENST00000415670 TCIRG1Q13488 830 aa21.41■■□□□ 1.02
CDC42EP1-202ENST00000415670 RTL5Q5HYW3 569 aaPredicted RBP21.41■■□□□ 1.02
CDC42EP1-202ENST00000415670 PCDH10Q9P2E7 1040 aa21.41■■□□□ 1.02
CDC42EP1-202ENST00000415670 NSFL1CQ9UNZ2 370 aaKnown RBP21.41■■□□□ 1.02
CDC42EP1-202ENST00000415670 CDHR2Q9BYE9 1310 aa21.4■■□□□ 1.02
CDC42EP1-202ENST00000415670 SCN9AQ15858 1988 aa21.4■■□□□ 1.02
CDC42EP1-202ENST00000415670 WASHC4Q2M389 1173 aa21.4■■□□□ 1.02
CDC42EP1-202ENST00000415670 ERBB4Q15303 1308 aa21.39■■□□□ 1.01
CDC42EP1-202ENST00000415670 DDX60Q8IY21 1712 aaKnown RBP21.39■■□□□ 1.01
CDC42EP1-202ENST00000415670 MOB2Q70IA6 237 aa21.39■■□□□ 1.01
CDC42EP1-202ENST00000415670 FAM89AQ96GI7 184 aa21.39■■□□□ 1.01
CDC42EP1-202ENST00000415670 IFT57Q9NWB7 429 aa21.39■■□□□ 1.01
CDC42EP1-202ENST00000415670 AKAP11Q9UKA4 1901 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 E9PSI1 815 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 ATP5J2-PTCD1G3V325 749 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 C6orf229H3BNL8 230 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 ZNF853P0CG23 659 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 SLFN5Q08AF3 891 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 C2orf69Q8N8R5 385 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 DPF2Q92785 391 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 CDCA7LQ96GN5 454 aa21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 SPINK5Q9NQ38 1064 aaPredicted RBP21.38■■□□□ 1.01
CDC42EP1-202ENST00000415670 SH3TC1Q8TE82 1336 aa21.37■■□□□ 1.01
CDC42EP1-202ENST00000415670 ECE2O60344 883 aa21.37■■□□□ 1.01
CDC42EP1-202ENST00000415670 GNAI1P63096 354 aa21.37■■□□□ 1.01
CDC42EP1-202ENST00000415670 LRRC37AA6NMS7 1700 aa21.37■■□□□ 1.01
CDC42EP1-202ENST00000415670 SLC10A3P09131 477 aa21.36■■□□□ 1.01
CDC42EP1-202ENST00000415670 TRMT2AQ8IZ69 625 aaKnown RBP21.36■■□□□ 1.01
CDC42EP1-202ENST00000415670 DCPSQ96C86 337 aaKnown RBP21.36■■□□□ 1.01
CDC42EP1-202ENST00000415670 BABAM1Q9NWV8 329 aa21.36■■□□□ 1.01
CDC42EP1-202ENST00000415670 CHL1O00533 1208 aa21.35■■□□□ 1.01
CDC42EP1-202ENST00000415670 CCDC102AQ96A19 550 aa21.35■■□□□ 1.01
CDC42EP1-202ENST00000415670 CDCA5Q96FF9 252 aa21.35■■□□□ 1.01
CDC42EP1-202ENST00000415670 GGA3Q9NZ52 723 aa21.35■■□□□ 1.01
CDC42EP1-202ENST00000415670 LAS1LQ9Y4W2 734 aaKnown RBP21.35■■□□□ 1.01
CDC42EP1-202ENST00000415670 WTIPA6NIX2 430 aaPredicted RBP21.34■■□□□ 1.01
CDC42EP1-202ENST00000415670 KIF4BQ2VIQ3 1234 aa21.34■■□□□ 1.01
CDC42EP1-202ENST00000415670 PRAMEF18Q5VWM3 479 aa21.34■■□□□ 1.01
CDC42EP1-202ENST00000415670 MYH16Q9H6N6 1097 aa21.34■■□□□ 1.01
CDC42EP1-202ENST00000415670 SAGE1Q9NXZ1 904 aa21.34■■□□□ 1.01
CDC42EP1-202ENST00000415670 DUSP27Q5VZP5 1158 aa21.33■■□□□ 1.01
CDC42EP1-202ENST00000415670 TBC1D16Q8TBP0 767 aa21.33■■□□□ 1.01
CDC42EP1-202ENST00000415670 SEC31BQ9NQW1 1179 aa21.33■■□□□ 1.01
CDC42EP1-202ENST00000415670 CHPF2Q9P2E5 772 aa21.33■■□□□ 1.01
CDC42EP1-202ENST00000415670 TBC1D8O95759 1140 aa21.32■■□□□ 1
CDC42EP1-202ENST00000415670 RASAL3Q86YV0 1011 aa21.32■■□□□ 1
CDC42EP1-202ENST00000415670 JARID2Q92833 1246 aaPredicted RBP21.32■■□□□ 1
CDC42EP1-202ENST00000415670 MBIPQ9NS73 344 aa21.32■■□□□ 1
CDC42EP1-202ENST00000415670 HPS5Q9UPZ3 1129 aa21.32■■□□□ 1
CDC42EP1-202ENST00000415670 FANCIQ9NVI1 1328 aa21.31■■□□□ 1
CDC42EP1-202ENST00000415670 VIL1P09327 827 aaKnown RBP21.31■■□□□ 1
CDC42EP1-202ENST00000415670 SCARF1Q14162 830 aa21.31■■□□□ 1
CDC42EP1-202ENST00000415670 SF3B3Q15393 1217 aaKnown RBP21.31■■□□□ 1
CDC42EP1-202ENST00000415670 HSP90AB3PQ58FF7 597 aa21.31■■□□□ 1
CDC42EP1-202ENST00000415670 ANGEL2Q5VTE6 544 aaKnown RBP21.31■■□□□ 1
CDC42EP1-202ENST00000415670 CTU1Q7Z7A3 348 aaKnown RBP21.31■■□□□ 1
CDC42EP1-202ENST00000415670 TSR2Q969E8 191 aaKnown RBP21.31■■□□□ 1
CDC42EP1-202ENST00000415670 ISCA1Q9BUE6 129 aa21.31■■□□□ 1
CDC42EP1-202ENST00000415670 UBE2Q2LH0YL09 131 aa21.29■■□□□ 1
CDC42EP1-202ENST00000415670 SULF1Q8IWU6 871 aa21.29■■□□□ 1
CDC42EP1-202ENST00000415670 RPS12P25398 132 aaKnown RBP21.28■■□□□ 1
CDC42EP1-202ENST00000415670 R3HDMLQ9H3Y0 253 aa21.28■■□□□ 1
CDC42EP1-202ENST00000415670 RPS8P62241 208 aaKnown RBP21.27■■□□□ 1
CDC42EP1-202ENST00000415670 MKRN3Q13064 507 aaKnown RBP21.27■■□□□ 1
CDC42EP1-202ENST00000415670 TMC4Q7Z404 712 aa21.27■■□□□ 1
CDC42EP1-202ENST00000415670 CCDC85AQ96PX6 553 aaPredicted RBP21.27■■□□□ 1
CDC42EP1-202ENST00000415670 MXD3Q9BW11 206 aa21.27■■□□□ 1
CDC42EP1-202ENST00000415670 IRS4O14654 1257 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP1-202ENST00000415670 ANKRD13DQ6ZTN6 518 aa21.26■□□□□ 0.99
CDC42EP1-202ENST00000415670 PLBD2Q8NHP8 589 aa21.26■□□□□ 0.99
CDC42EP1-202ENST00000415670 ZNF296Q8WUU4 475 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP1-202ENST00000415670 UFL1O94874 794 aa21.25■□□□□ 0.99
CDC42EP1-202ENST00000415670 ZNF280AP59817 542 aaPredicted RBP21.25■□□□□ 0.99
CDC42EP1-202ENST00000415670 PRPF38BQ5VTL8 546 aaKnown RBP21.25■□□□□ 0.99
CDC42EP1-202ENST00000415670 ZC3H12CQ9C0D7 883 aaKnown RBP21.25■□□□□ 0.99
CDC42EP1-202ENST00000415670 MKI67P46013 3256 aaKnown RBP21.24■□□□□ 0.99
CDC42EP1-202ENST00000415670 EXOSC9Q06265 439 aaKnown RBP21.24■□□□□ 0.99
CDC42EP1-202ENST00000415670 GMLQ99445 158 aa21.24■□□□□ 0.99
CDC42EP1-202ENST00000415670 EYA3Q99504 573 aa21.24■□□□□ 0.99
CDC42EP1-202ENST00000415670 RSBN1LQ6PCB5 846 aaPredicted RBP21.23■□□□□ 0.99
CDC42EP1-202ENST00000415670 NBPF9Q3BBW0 867 aa21.22■□□□□ 0.99
CDC42EP1-202ENST00000415670 HDGFL1Q5TGJ6 251 aa21.22■□□□□ 0.99
CDC42EP1-202ENST00000415670 ANKIB1Q9P2G1 1089 aa21.22■□□□□ 0.99
CDC42EP1-202ENST00000415670 MYOZ2Q9NPC6 264 aa21.21■□□□□ 0.99
CDC42EP1-202ENST00000415670 PODXL2Q9NZ53 605 aa21.21■□□□□ 0.99
CDC42EP1-202ENST00000415670 FZD1Q9UP38 647 aa21.21■□□□□ 0.99
CDC42EP1-202ENST00000415670 CACNA1FO60840 1977 aa21.2■□□□□ 0.98
CDC42EP1-202ENST00000415670 G3V3G9 751 aa21.2■□□□□ 0.98
CDC42EP1-202ENST00000415670 DCAF8Q5TAQ9 597 aa21.2■□□□□ 0.98
CDC42EP1-202ENST00000415670 C8orf58Q8NAV2 365 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms