RNA–Protein interactions for RNA: ENST00000415428.5

LMBR1-204, Transcript of limb development membrane protein 1, humanhuman

TSL 1 (best)

Gene LMBR1, Length 3,457 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-204ENST00000415428 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
LMBR1-204ENST00000415428 A1BGP04217 495 aa8.32□□□□□ -1.08
LMBR1-204ENST00000415428 IRF5Q13568 498 aa8.32□□□□□ -1.08
LMBR1-204ENST00000415428 BICDL1Q6ZP65 573 aa8.32□□□□□ -1.08
LMBR1-204ENST00000415428 C3orf67Q6ZVT6 689 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 PODNQ7Z5L7 613 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 MICALL2Q8IY33 904 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 NIP7Q9Y221 180 aaKnown RBP eCLIP8.31□□□□□ -1.08
LMBR1-204ENST00000415428 ZBTB12Q9Y330 459 aaPredicted RBP8.31□□□□□ -1.08
LMBR1-204ENST00000415428 PARP14Q460N5 1801 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 SLC39A6Q13433 755 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 ARHGEF6Q15052 776 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 TAF7Q15545 349 aaPredicted RBP8.31□□□□□ -1.08
LMBR1-204ENST00000415428 KIF4BQ2VIQ3 1234 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 FKBP1CQ5VVH2 108 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 NLRP10Q86W26 655 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 MPNDQ8N594 471 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 MS4A4AQ96JQ5 239 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 SIPA1L1O43166 1804 aa8.31□□□□□ -1.08
LMBR1-204ENST00000415428 PPIP5K2O43314 1243 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 HSP90B1P14625 803 aaKnown RBP8.3□□□□□ -1.08
LMBR1-204ENST00000415428 WNK4Q96J92 1243 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 PSMD14O00487 310 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 AOC3Q16853 763 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 NOL9Q5SY16 702 aaKnown RBP8.3□□□□□ -1.08
LMBR1-204ENST00000415428 USP48Q86UV5 1035 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 HELBQ8NG08 1087 aaPredicted RBP8.3□□□□□ -1.08
LMBR1-204ENST00000415428 GDF15Q99988 308 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 UTP14AQ9BVJ6 771 aaKnown RBP8.3□□□□□ -1.08
LMBR1-204ENST00000415428 GJA8P48165 433 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 SOX10P56693 466 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 MAP3K10Q02779 954 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 PANK3Q9H999 370 aa8.3□□□□□ -1.08
LMBR1-204ENST00000415428 DACT2Q5SW24 774 aa8.29□□□□□ -1.08
LMBR1-204ENST00000415428 STRIP1Q5VSL9 837 aa8.29□□□□□ -1.08
LMBR1-204ENST00000415428 PPARGC1BQ86YN6 1023 aaKnown RBP8.29□□□□□ -1.08
LMBR1-204ENST00000415428 RPGRQ92834 1020 aaKnown RBP8.29□□□□□ -1.08
LMBR1-204ENST00000415428 DCPSQ96C86 337 aaKnown RBP8.29□□□□□ -1.08
LMBR1-204ENST00000415428 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
LMBR1-204ENST00000415428 CANXP27824 592 aaKnown RBP8.29□□□□□ -1.08
LMBR1-204ENST00000415428 TCIRG1Q13488 830 aa8.29□□□□□ -1.08
LMBR1-204ENST00000415428 ZNF157P51786 506 aaPredicted RBP8.28□□□□□ -1.08
LMBR1-204ENST00000415428 TBC1D16Q8TBP0 767 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 TBC1D2BQ9UPU7 963 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 POTEFA5A3E0 1075 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 KRT26Q7Z3Y9 468 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 PXYLP1Q8TE99 480 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 NLRP3Q96P20 1036 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 CDK5RAP2Q96SN8 1893 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 IGSF3O75054 1194 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 ZNF112Q9UJU3 913 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 CLEC11AQ9Y240 323 aa8.28□□□□□ -1.08
LMBR1-204ENST00000415428 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.08
LMBR1-204ENST00000415428 ATP2B4P23634 1241 aa8.27□□□□□ -1.08
LMBR1-204ENST00000415428 DPP8Q6V1X1 898 aaPredicted RBP8.27□□□□□ -1.08
LMBR1-204ENST00000415428 MORC1Q86VD1 984 aa8.27□□□□□ -1.08
LMBR1-204ENST00000415428 POLLQ9UGP5 575 aa8.27□□□□□ -1.08
LMBR1-204ENST00000415428 ECE2O60344 883 aa8.27□□□□□ -1.09
LMBR1-204ENST00000415428 HDLBPQ00341 1268 aaKnown RBP8.27□□□□□ -1.09
LMBR1-204ENST00000415428 MYOZ2Q9NPC6 264 aa8.27□□□□□ -1.09
LMBR1-204ENST00000415428 PRDM6Q9NQX0 595 aa8.27□□□□□ -1.09
LMBR1-204ENST00000415428 SLC4A2P04920 1241 aa8.27□□□□□ -1.09
LMBR1-204ENST00000415428 MOGSQ13724 837 aa8.27□□□□□ -1.09
LMBR1-204ENST00000415428 PAK6Q9NQU5 681 aaPredicted RBP8.27□□□□□ -1.09
LMBR1-204ENST00000415428 ATRNL1Q5VV63 1379 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 IL1R1P14778 569 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 OLFM4Q6UX06 510 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 KCNH4Q9UQ05 1017 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 HOXD11P31277 338 aaPredicted RBP8.26□□□□□ -1.09
LMBR1-204ENST00000415428 POTEB2H3BUK9 544 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 TEFQ10587 303 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 KIF6Q6ZMV9 814 aa8.26□□□□□ -1.09
LMBR1-204ENST00000415428 LRRC37A2A6NM11 1700 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 GJB1P08034 283 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 ANKRD23Q86SG2 305 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 PLBD2Q8NHP8 589 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 COA1Q9GZY4 146 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 SH3TC1Q8TE82 1336 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 KCNQ3O43525 872 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 SCARF1Q14162 830 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 C17orf99Q6UX52 265 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 KCNH6Q9H252 994 aa8.25□□□□□ -1.09
LMBR1-204ENST00000415428 SPINK5Q9NQ38 1064 aaPredicted RBP8.25□□□□□ -1.09
LMBR1-204ENST00000415428 ADM5C9JUS6 153 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 GPSM2P81274 684 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 ARMC9Q7Z3E5 817 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 TBC1D2Q9BYX2 928 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 DLL1O00548 723 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 CAP1Q01518 475 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 LEMD3Q9Y2U8 911 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 XDHP47989 1333 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 COL6A1P12109 1028 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 C1orf53Q5VUE5 145 aa8.24□□□□□ -1.09
LMBR1-204ENST00000415428 ZNF853P0CG23 659 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 GJA5P36382 358 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 AK9Q5TCS8 1911 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 SAMD7Q7Z3H4 446 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
LMBR1-204ENST00000415428 SUGT1Q9Y2Z0 365 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms