RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 STK31Q9BXU1 1019 aa12.34□□□□□ -0.43
LINC01090-201ENST00000415357 ZNF277Q9NRM2 450 aaPredicted RBP12.34□□□□□ -0.43
LINC01090-201ENST00000415357 ABCC4O15439 1325 aa12.34□□□□□ -0.43
LINC01090-201ENST00000415357 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
LINC01090-201ENST00000415357 FKBP4Q02790 459 aaKnown RBP eCLIP12.33□□□□□ -0.44
LINC01090-201ENST00000415357 JARID2Q92833 1246 aaPredicted RBP12.33□□□□□ -0.44
LINC01090-201ENST00000415357 CRAMP1Q96RY5 1269 aa12.33□□□□□ -0.44
LINC01090-201ENST00000415357 MAP3K2Q9Y2U5 619 aa12.33□□□□□ -0.44
LINC01090-201ENST00000415357 KDM2BQ8NHM5 1336 aa12.33□□□□□ -0.44
LINC01090-201ENST00000415357 ZNF521Q96K83 1311 aa12.33□□□□□ -0.44
LINC01090-201ENST00000415357 COL4A1P02462 1669 aa12.32□□□□□ -0.44
LINC01090-201ENST00000415357 PI4KAP2A4QPH2 592 aa12.32□□□□□ -0.44
LINC01090-201ENST00000415357 VAMP4O75379 141 aa12.32□□□□□ -0.44
LINC01090-201ENST00000415357 DDX58O95786 925 aaKnown RBP12.32□□□□□ -0.44
LINC01090-201ENST00000415357 TRIM28Q13263 835 aaKnown RBP12.32□□□□□ -0.44
LINC01090-201ENST00000415357 PI4KAP1Q8N8J0 262 aa12.32□□□□□ -0.44
LINC01090-201ENST00000415357 METTL22Q9BUU2 404 aaPredicted RBP12.32□□□□□ -0.44
LINC01090-201ENST00000415357 RRAGCQ9HB90 399 aa12.32□□□□□ -0.44
LINC01090-201ENST00000415357 DICER1Q9UPY3 1922 aaKnown RBP12.32□□□□□ -0.44
LINC01090-201ENST00000415357 ZC3H4Q9UPT8 1303 aaKnown RBP12.32□□□□□ -0.44
LINC01090-201ENST00000415357 IRS4O14654 1257 aaPredicted RBP12.31□□□□□ -0.44
LINC01090-201ENST00000415357 RTKN2Q8IZC4 609 aa12.31□□□□□ -0.44
LINC01090-201ENST00000415357 CHMP4AQ9BY43 222 aa12.31□□□□□ -0.44
LINC01090-201ENST00000415357 MYH16Q9H6N6 1097 aa12.31□□□□□ -0.44
LINC01090-201ENST00000415357 TAF1P21675 1872 aa12.31□□□□□ -0.44
LINC01090-201ENST00000415357 COL4A5P29400 1685 aa12.3□□□□□ -0.44
LINC01090-201ENST00000415357 GLTPD2A6NH11 291 aa12.3□□□□□ -0.44
LINC01090-201ENST00000415357 CCER2I3L3R5 266 aa12.3□□□□□ -0.44
LINC01090-201ENST00000415357 IGKV5-2P06315 115 aa12.3□□□□□ -0.44
LINC01090-201ENST00000415357 FLIIQ13045 1269 aa12.3□□□□□ -0.44
LINC01090-201ENST00000415357 KSR2Q6VAB6 950 aa12.3□□□□□ -0.44
LINC01090-201ENST00000415357 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
LINC01090-201ENST00000415357 CWC25Q9NXE8 425 aaPredicted RBP12.3□□□□□ -0.44
LINC01090-201ENST00000415357 IARSP41252 1262 aaKnown RBP12.29□□□□□ -0.44
LINC01090-201ENST00000415357 FKBP5Q13451 457 aaPredicted RBP12.29□□□□□ -0.44
LINC01090-201ENST00000415357 GRAPQ13588 217 aa12.29□□□□□ -0.44
LINC01090-201ENST00000415357 CWF19L2Q2TBE0 894 aaKnown RBP12.29□□□□□ -0.44
LINC01090-201ENST00000415357 ZBTB38Q8NAP3 1195 aaPredicted RBP12.29□□□□□ -0.44
LINC01090-201ENST00000415357 CCDC191Q8NCU4 936 aa12.29□□□□□ -0.44
LINC01090-201ENST00000415357 GRAPLQ8TC17 118 aaPredicted RBP12.29□□□□□ -0.44
LINC01090-201ENST00000415357 ZNF541Q9H0D2 1346 aa12.29□□□□□ -0.44
LINC01090-201ENST00000415357 SNPHO15079 494 aa12.28□□□□□ -0.44
LINC01090-201ENST00000415357 DDNO94850 711 aaPredicted RBP12.28□□□□□ -0.44
LINC01090-201ENST00000415357 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
LINC01090-201ENST00000415357 HOXB3P14651 431 aaPredicted RBP12.28□□□□□ -0.44
LINC01090-201ENST00000415357 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
LINC01090-201ENST00000415357 DOK7Q18PE1 504 aa12.28□□□□□ -0.44
LINC01090-201ENST00000415357 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
LINC01090-201ENST00000415357 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
LINC01090-201ENST00000415357 CCDC85AQ96PX6 553 aaPredicted RBP12.28□□□□□ -0.44
LINC01090-201ENST00000415357 PSMD1Q99460 953 aa12.28□□□□□ -0.44
LINC01090-201ENST00000415357 ATP6V0A2Q9Y487 856 aa12.28□□□□□ -0.44
LINC01090-201ENST00000415357 CEP350Q5VT06 3117 aa12.27□□□□□ -0.44
LINC01090-201ENST00000415357 TOMM70O94826 608 aa12.27□□□□□ -0.45
LINC01090-201ENST00000415357 NEXNQ0ZGT2 675 aa12.27□□□□□ -0.45
LINC01090-201ENST00000415357 DIEXFQ68CQ4 756 aaKnown RBP12.27□□□□□ -0.45
LINC01090-201ENST00000415357 C16orf71Q8IYS4 520 aaPredicted RBP12.27□□□□□ -0.45
LINC01090-201ENST00000415357 WDR90Q96KV7 1748 aa12.27□□□□□ -0.45
LINC01090-201ENST00000415357 DUOX1Q9NRD9 1551 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 LRRC37AA6NMS7 1700 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 NEURL1BA8MQ27 555 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 POTECB2RU33 542 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 F6X3S4 739 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 BBOX1O75936 387 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 CDCA7LQ96GN5 454 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 SEC31BQ9NQW1 1179 aa12.26□□□□□ -0.45
LINC01090-201ENST00000415357 E9PSI1 815 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 VEGFAP15692 232 aaPredicted RBP12.25□□□□□ -0.45
LINC01090-201ENST00000415357 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 E2F4Q16254 413 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 AOC3Q16853 763 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
LINC01090-201ENST00000415357 SP8Q8IXZ3 490 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 ZNF710Q8N1W2 664 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 LARGE2Q8N3Y3 721 aa12.25□□□□□ -0.45
LINC01090-201ENST00000415357 TMX4Q9H1E5 349 aaPredicted RBP12.25□□□□□ -0.45
LINC01090-201ENST00000415357 FZD9O00144 591 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 PPIP5K2O43314 1243 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 PDE8AO60658 829 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 UBE3BQ7Z3V4 1068 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 MPNDQ8N594 471 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 RBM46Q8TBY0 533 aaKnown RBP12.24□□□□□ -0.45
LINC01090-201ENST00000415357 JDP2Q8WYK2 163 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 CDHR2Q9BYE9 1310 aa12.24□□□□□ -0.45
LINC01090-201ENST00000415357 CACNA1FO60840 1977 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 RIMBP2O15034 1052 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 HSPA6P17066 643 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 CTSWP56202 376 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 GCKRQ14397 625 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 CCDC152Q4G0S7 254 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 GRIPAP1Q4V328 841 aa12.23□□□□□ -0.45
LINC01090-201ENST00000415357 RTFDC1Q9BY42 306 aaPredicted RBP12.23□□□□□ -0.45
LINC01090-201ENST00000415357 H7C1W4 665 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 HSP90B1P14625 803 aaKnown RBP12.22□□□□□ -0.45
LINC01090-201ENST00000415357 CASP7P55210 303 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 RPS8P62241 208 aaKnown RBP12.22□□□□□ -0.45
LINC01090-201ENST00000415357 GPSM2P81274 684 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 TMC4Q7Z404 712 aa12.22□□□□□ -0.45
LINC01090-201ENST00000415357 NIM1KQ8IY84 436 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms