RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 CWC25Q9NXE8 425 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-203ENST00000415281 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 ECE2O60344 883 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 HSPA8P11142 646 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 SAPCD2Q86UD0 394 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 MICALL2Q8IY33 904 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 ZC3H15Q8WU90 426 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 BCL2L13Q9BXK5 485 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 PRDM10Q9NQV6 1147 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 MYH3P11055 1940 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 SPEF2Q9C093 1822 aa16.05■□□□□ 0.16
NCKIPSD-203ENST00000415281 ANP32CO43423 234 aa16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 CAPN15O75808 1086 aa16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 LBX1P52954 281 aa16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 CASP7P55210 303 aa16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 CWF19L2Q2TBE0 894 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 NCBP3Q53F19 620 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 TTLL11Q8NHH1 800 aa16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 CAPNS2Q96L46 248 aa16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 SPINK5Q9NQ38 1064 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-203ENST00000415281 ASTN2O75129 1339 aaPredicted RBP16.03■□□□□ 0.16
NCKIPSD-203ENST00000415281 H7C1W4 665 aa16.03■□□□□ 0.16
NCKIPSD-203ENST00000415281 AOC2O75106 756 aa16.03■□□□□ 0.16
NCKIPSD-203ENST00000415281 VIL1P09327 827 aaKnown RBP16.03■□□□□ 0.16
NCKIPSD-203ENST00000415281 NEURL1BA8MQ27 555 aa16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 CELF2O95319 508 aaKnown RBP16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 CTCFP49711 727 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 TBC1D10BQ4KMP7 808 aaPredicted RBP16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 USP48Q86UV5 1035 aa16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 ZIC5Q96T25 663 aa16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 GMLQ99445 158 aa16.02■□□□□ 0.16
NCKIPSD-203ENST00000415281 IL16Q14005 1332 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 H7C1D1 291 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 VAMP4O75379 141 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 CCDC152Q4G0S7 254 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 CDC37L1Q7L3B6 337 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 GREM2Q9H772 168 aa16.01■□□□□ 0.15
NCKIPSD-203ENST00000415281 UFL1O94874 794 aa16■□□□□ 0.15
NCKIPSD-203ENST00000415281 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
NCKIPSD-203ENST00000415281 CTSWP56202 376 aa16■□□□□ 0.15
NCKIPSD-203ENST00000415281 EYA3Q99504 573 aa16■□□□□ 0.15
NCKIPSD-203ENST00000415281 ZC3H12CQ9C0D7 883 aaKnown RBP16■□□□□ 0.15
NCKIPSD-203ENST00000415281 MINPP1Q9UNW1 487 aa16■□□□□ 0.15
NCKIPSD-203ENST00000415281 CACNA1FO60840 1977 aa16■□□□□ 0.15
NCKIPSD-203ENST00000415281 FANCIQ9NVI1 1328 aa15.99■□□□□ 0.15
NCKIPSD-203ENST00000415281 RPS12P25398 132 aaKnown RBP15.99■□□□□ 0.15
NCKIPSD-203ENST00000415281 TXNRD3Q86VQ6 643 aa15.99■□□□□ 0.15
NCKIPSD-203ENST00000415281 HHIPL1Q96JK4 782 aa15.99■□□□□ 0.15
NCKIPSD-203ENST00000415281 GGA1Q9UJY5 639 aa15.99■□□□□ 0.15
NCKIPSD-203ENST00000415281 ZNF609O15014 1411 aa15.99■□□□□ 0.15
NCKIPSD-203ENST00000415281 ADM5C9JUS6 153 aa15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 CSF1RP07333 972 aa15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 ZNF280AP59817 542 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 GCKRQ14397 625 aa15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 RBM26Q5T8P6 1007 aaKnown RBP15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
NCKIPSD-203ENST00000415281 XDHP47989 1333 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 FAM155AB1AL88 458 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 MAP2K2P36507 400 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 ECE1P42892 770 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 FLIIQ13045 1269 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 RSBN1LQ6PCB5 846 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 ANKRD18AQ8IVF6 992 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 PLA2G12BQ9BX93 195 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 MRS2Q9HD23 443 aa15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 BSDC1Q9NW68 430 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 SALL2Q9Y467 1007 aaPredicted RBP15.97■□□□□ 0.15
NCKIPSD-203ENST00000415281 A0A1B0GUL6 1792 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 HSP90B1P14625 803 aaKnown RBP15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 ATP2B4P23634 1241 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 GRM1Q13255 1194 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 UBE3BQ7Z3V4 1068 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 WDR63Q8IWG1 891 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 AIDAQ96BJ3 306 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 MXD3Q9BW11 206 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 TSKSQ9UJT2 592 aa15.96■□□□□ 0.15
NCKIPSD-203ENST00000415281 IRS2Q9Y4H2 1338 aa15.95■□□□□ 0.14
NCKIPSD-203ENST00000415281 KLRK1P26718 216 aa15.95■□□□□ 0.14
NCKIPSD-203ENST00000415281 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
NCKIPSD-203ENST00000415281 CHMP4AQ9BY43 222 aa15.95■□□□□ 0.14
NCKIPSD-203ENST00000415281 CCT4P50991 539 aaKnown RBP15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 FOXO4P98177 505 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 KIF4BQ2VIQ3 1234 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 DACT2Q5SW24 774 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 PAXIP1Q6ZW49 1069 aaPredicted RBP15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 KRT26Q7Z3Y9 468 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 AGBL3Q8NEM8 1001 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 DNAAF4Q8WXU2 420 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 MED23Q9ULK4 1368 aa15.94■□□□□ 0.14
NCKIPSD-203ENST00000415281 CASP8AP2Q9UKL3 1982 aa15.93■□□□□ 0.14
NCKIPSD-203ENST00000415281 F6X3S4 739 aa15.93■□□□□ 0.14
NCKIPSD-203ENST00000415281 SNAP23O00161 211 aa15.93■□□□□ 0.14
NCKIPSD-203ENST00000415281 SCARF1Q14162 830 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms